RNA–Protein interactions for RNA: ENST00000544596.5

ABCA13-207, Transcript of ATP binding cassette subfamily A member 13, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene ABCA13, Length 7,870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-207ENST00000544596 GTF2A1P52655 376 aaPredicted RBP9.14□□□□□ -0.95
ABCA13-207ENST00000544596 PPARDQ03181 441 aa9.14□□□□□ -0.95
ABCA13-207ENST00000544596 FNBP4Q8N3X1 1017 aaPredicted RBP9.14□□□□□ -0.95
ABCA13-207ENST00000544596 KRT23Q9C075 422 aa9.14□□□□□ -0.95
ABCA13-207ENST00000544596 DNAI1Q9UI46 699 aa9.14□□□□□ -0.95
ABCA13-207ENST00000544596 CASC4Q6P4E1 433 aa9.14□□□□□ -0.95
ABCA13-207ENST00000544596 PRDM2Q13029 1718 aa9.14□□□□□ -0.95
ABCA13-207ENST00000544596 NEDD9Q14511 834 aa9.14□□□□□ -0.95
ABCA13-207ENST00000544596 ERCC6LQ2NKX8 1250 aa9.14□□□□□ -0.95
ABCA13-207ENST00000544596 SEL1L2Q5TEA6 688 aa9.14□□□□□ -0.95
ABCA13-207ENST00000544596 SAMD15Q9P1V8 674 aa9.14□□□□□ -0.95
ABCA13-207ENST00000544596 NSFL1CQ9UNZ2 370 aaKnown RBP9.14□□□□□ -0.95
ABCA13-207ENST00000544596 RRP9O43818 475 aaKnown RBP9.14□□□□□ -0.95
ABCA13-207ENST00000544596 CHRNA2Q15822 529 aa9.14□□□□□ -0.95
ABCA13-207ENST00000544596 MAEAQ7L5Y9 396 aa9.14□□□□□ -0.95
ABCA13-207ENST00000544596 JAKMIP2Q96AA8 810 aa9.14□□□□□ -0.95
ABCA13-207ENST00000544596 CCDC42Q96M95 316 aa9.14□□□□□ -0.95
ABCA13-207ENST00000544596 PICK1Q9NRD5 415 aa9.14□□□□□ -0.95
ABCA13-207ENST00000544596 DBF4Q9UBU7 674 aaPredicted RBP9.14□□□□□ -0.95
ABCA13-207ENST00000544596 TMPOP42166 694 aaKnown RBP9.14□□□□□ -0.95
ABCA13-207ENST00000544596 ZYXQ15942 572 aaKnown RBP9.14□□□□□ -0.95
ABCA13-207ENST00000544596 TMOD4Q9NZQ9 345 aa9.14□□□□□ -0.95
ABCA13-207ENST00000544596 MTUS1Q9ULD2 1270 aa9.14□□□□□ -0.95
ABCA13-207ENST00000544596 GUCA1BQ9UMX6 200 aa9.14□□□□□ -0.95
ABCA13-207ENST00000544596 VIMP08670 466 aaKnown RBP9.13□□□□□ -0.95
ABCA13-207ENST00000544596 UQCRFS1P1P0C7P4 283 aa9.13□□□□□ -0.95
ABCA13-207ENST00000544596 STX17P56962 302 aa9.13□□□□□ -0.95
ABCA13-207ENST00000544596 FAM200AQ8TCP9 573 aa9.13□□□□□ -0.95
ABCA13-207ENST00000544596 ARHGAP5Q13017 1502 aa9.13□□□□□ -0.95
ABCA13-207ENST00000544596 STK10O94804 968 aaKnown RBP9.13□□□□□ -0.95
ABCA13-207ENST00000544596 UBXN1Q04323 297 aa9.13□□□□□ -0.95
ABCA13-207ENST00000544596 TEX13AQ9BXU3 409 aaPredicted RBP9.13□□□□□ -0.95
ABCA13-207ENST00000544596 IRAK4Q9NWZ3 460 aa9.13□□□□□ -0.95
ABCA13-207ENST00000544596 TMTC4Q5T4D3 741 aa9.13□□□□□ -0.95
ABCA13-207ENST00000544596 NECAB1Q8N987 351 aa9.13□□□□□ -0.95
ABCA13-207ENST00000544596 RNF169Q8NCN4 708 aa9.13□□□□□ -0.95
ABCA13-207ENST00000544596 CTAGE9A4FU28 777 aa9.13□□□□□ -0.95
ABCA13-207ENST00000544596 SPOPO43791 374 aa9.13□□□□□ -0.95
ABCA13-207ENST00000544596 AFAP1L2Q8N4X5 818 aa9.13□□□□□ -0.95
ABCA13-207ENST00000544596 PPP1R12CQ9BZL4 782 aa9.13□□□□□ -0.95
ABCA13-207ENST00000544596 UBAP1LF5GYI3 381 aa9.13□□□□□ -0.95
ABCA13-207ENST00000544596 GNAQP50148 359 aa9.13□□□□□ -0.95
ABCA13-207ENST00000544596 PLCB4Q15147 1175 aa9.13□□□□□ -0.95
ABCA13-207ENST00000544596 CHST3Q7LGC8 479 aa9.13□□□□□ -0.95
ABCA13-207ENST00000544596 RIOK1Q9BRS2 568 aaKnown RBP9.13□□□□□ -0.95
ABCA13-207ENST00000544596 ARFGAP3Q9NP61 516 aa9.13□□□□□ -0.95
ABCA13-207ENST00000544596 NKIRAS1Q9NYS0 192 aa9.13□□□□□ -0.95
ABCA13-207ENST00000544596 RBM27Q9P2N5 1060 aaKnown RBP9.13□□□□□ -0.95
ABCA13-207ENST00000544596 FRMD4BQ9Y2L6 1034 aa9.13□□□□□ -0.95
ABCA13-207ENST00000544596 RABGAP1Q9Y3P9 1069 aa9.13□□□□□ -0.95
ABCA13-207ENST00000544596 MGEA5O60502 916 aa9.13□□□□□ -0.95
ABCA13-207ENST00000544596 GNL1P36915 607 aaPredicted RBP9.13□□□□□ -0.95
ABCA13-207ENST00000544596 PRR16Q569H4 304 aa9.13□□□□□ -0.95
ABCA13-207ENST00000544596 GIMAP6Q6P9H5 292 aa9.13□□□□□ -0.95
ABCA13-207ENST00000544596 PSPC1Q8WXF1 523 aaKnown RBP9.13□□□□□ -0.95
ABCA13-207ENST00000544596 BRF1Q92994 677 aa9.13□□□□□ -0.95
ABCA13-207ENST00000544596 SH2D4BQ5SQS7 431 aa9.12□□□□□ -0.95
ABCA13-207ENST00000544596 BSPRYQ5W0U4 402 aa9.12□□□□□ -0.95
ABCA13-207ENST00000544596 GABPB2Q8TAK5 448 aaPredicted RBP9.12□□□□□ -0.95
ABCA13-207ENST00000544596 VCX3BQ9H321 246 aa9.12□□□□□ -0.95
ABCA13-207ENST00000544596 MCM9Q9NXL9 1143 aa9.12□□□□□ -0.95
ABCA13-207ENST00000544596 NIP7Q9Y221 180 aaKnown RBP eCLIP9.12□□□□□ -0.953e-8■■■□□ 18.6
ABCA13-207ENST00000544596 M0QZ92 97 aa9.12□□□□□ -0.95
ABCA13-207ENST00000544596 FAM47CQ5HY64 1035 aa9.12□□□□□ -0.95
ABCA13-207ENST00000544596 FCHSD1Q86WN1 690 aa9.12□□□□□ -0.95
ABCA13-207ENST00000544596 ECHDC1Q9NTX5 307 aa9.12□□□□□ -0.95
ABCA13-207ENST00000544596 NAIPQ13075 1403 aa9.12□□□□□ -0.95
ABCA13-207ENST00000544596 TXNDC9O14530 226 aa9.12□□□□□ -0.95
ABCA13-207ENST00000544596 KRT19P08727 400 aa9.12□□□□□ -0.95
ABCA13-207ENST00000544596 KARSQ15046 597 aaKnown RBP9.12□□□□□ -0.95
ABCA13-207ENST00000544596 FAM170AA1A519 330 aa9.12□□□□□ -0.95
ABCA13-207ENST00000544596 MYCLP12524 364 aaPredicted RBP9.12□□□□□ -0.95
ABCA13-207ENST00000544596 RNASE9P60153 205 aaKnown RBP9.12□□□□□ -0.95
ABCA13-207ENST00000544596 CCDC122Q5T0U0 273 aa9.12□□□□□ -0.95
ABCA13-207ENST00000544596 NAP1L4Q99733 375 aaKnown RBP9.12□□□□□ -0.95
ABCA13-207ENST00000544596 CCDC171Q6TFL3 1326 aa9.12□□□□□ -0.95
ABCA13-207ENST00000544596 MAGEB6P1A0A0J9YX57 407 aa9.12□□□□□ -0.95
ABCA13-207ENST00000544596 KCNA4P22459 653 aa9.12□□□□□ -0.95
ABCA13-207ENST00000544596 ZNF131P52739 623 aa9.12□□□□□ -0.95
ABCA13-207ENST00000544596 SKA2Q8WVK7 121 aaPredicted RBP9.12□□□□□ -0.95
ABCA13-207ENST00000544596 DDX27Q96GQ7 796 aaKnown RBP9.12□□□□□ -0.95
ABCA13-207ENST00000544596 TCEANC2Q96MN5 208 aa9.12□□□□□ -0.95
ABCA13-207ENST00000544596 USTQ9Y2C2 406 aa9.12□□□□□ -0.95
ABCA13-207ENST00000544596 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.12□□□□□ -0.95
ABCA13-207ENST00000544596 ANXA1P04083 346 aa9.12□□□□□ -0.95
ABCA13-207ENST00000544596 ZNF830Q96NB3 372 aaPredicted RBP9.12□□□□□ -0.95
ABCA13-207ENST00000544596 DDX39AO00148 427 aaKnown RBP9.12□□□□□ -0.95
ABCA13-207ENST00000544596 KRT86O43790 486 aa9.12□□□□□ -0.95
ABCA13-207ENST00000544596 ATP6V1E1P36543 226 aa9.12□□□□□ -0.95
ABCA13-207ENST00000544596 IFRD2Q12894 506 aaPredicted RBP9.12□□□□□ -0.95
ABCA13-207ENST00000544596 RBBP5Q15291 538 aaKnown RBP9.12□□□□□ -0.95
ABCA13-207ENST00000544596 GPR161Q8N6U8 529 aaKnown RBP9.12□□□□□ -0.95
ABCA13-207ENST00000544596 MIGA1Q8NAN2 632 aa9.12□□□□□ -0.95
ABCA13-207ENST00000544596 RHOXF2BP0C7M4 288 aa9.11□□□□□ -0.95
ABCA13-207ENST00000544596 STRN3Q13033 797 aa9.11□□□□□ -0.95
ABCA13-207ENST00000544596 EAPPQ56P03 285 aaPredicted RBP9.11□□□□□ -0.95
ABCA13-207ENST00000544596 PARD3BQ8TEW8 1205 aa9.11□□□□□ -0.95
ABCA13-207ENST00000544596 KIFAP3Q92845 792 aa9.11□□□□□ -0.95
ABCA13-207ENST00000544596 RHOXF2Q9BQY4 288 aa9.11□□□□□ -0.95
ABCA13-207ENST00000544596 CCDC61Q9Y6R9 512 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 189.4 ms