RNA–Protein interactions for RNA: ENST00000544596.5

ABCA13-207, Transcript of ATP binding cassette subfamily A member 13, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene ABCA13, Length 7,870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-207ENST00000544596 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.17□□□□□ -0.782e-6■■■■■ 96.1
ABCA13-207ENST00000544596 AATFQ9NY61 560 aaKnown RBP eCLIP8.96□□□□□ -0.983e-12■■■■■ 83.4
ABCA13-207ENST00000544596 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.79□□□□□ -1.164e-9■■■■■ 61.2
ABCA13-207ENST00000544596 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.49□□□□□ -1.212e-6■■■■■ 50.2
ABCA13-207ENST00000544596 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.3□□□□□ -0.923e-7■■■■■ 48.3
ABCA13-207ENST00000544596 AGGF1Q8N302 714 aaeCLIP8.34□□□□□ -1.072e-9■■■■■ 42
ABCA13-207ENST00000544596 XRCC6P12956 609 aaKnown RBP eCLIP9.18□□□□□ -0.944e-7■■■■■ 37.7
ABCA13-207ENST00000544596 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.72□□□□□ -1.012e-7■■■■■ 36.2
ABCA13-207ENST00000544596 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.37□□□□□ -1.071e-7■■■■□ 24.3
ABCA13-207ENST00000544596 NIP7Q9Y221 180 aaKnown RBP eCLIP9.12□□□□□ -0.953e-8■■■□□ 18.6
ABCA13-207ENST00000544596 RPS3P23396 243 aaKnown RBP eCLIP7.81□□□□□ -1.165e-7■■■□□ 17.4
ABCA13-207ENST00000544596 DKC1O60832 514 aaKnown RBP eCLIP9.01□□□□□ -0.971e-5■■□□□ 13.2
ABCA13-207ENST00000544596 PPIGQ13427 754 aaKnown RBP eCLIP8□□□□□ -1.136e-6■□□□□ 9.4
Retrieved 13 of 13 RNA–protein pairs in 19.8 ms