RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 CNNM1Q9NRU3 951 aa20.83■□□□□ 0.93
SCARB1-208ENST00000544327 TRMT112Q9UI30 125 aaKnown RBP20.83■□□□□ 0.93
SCARB1-208ENST00000544327 RCOR1Q9UKL0 485 aa20.83■□□□□ 0.93
SCARB1-208ENST00000544327 GPAA1O43292 621 aa20.83■□□□□ 0.92
SCARB1-208ENST00000544327 TPM2P07951 284 aa20.83■□□□□ 0.92
SCARB1-208ENST00000544327 TYRO3Q06418 890 aa20.83■□□□□ 0.92
SCARB1-208ENST00000544327 DZIP3Q86Y13 1208 aaKnown RBP20.83■□□□□ 0.92
SCARB1-208ENST00000544327 FAM200AQ8TCP9 573 aa20.83■□□□□ 0.92
SCARB1-208ENST00000544327 TNMDQ9H2S6 317 aa20.83■□□□□ 0.92
SCARB1-208ENST00000544327 UBN2Q6ZU65 1347 aa20.82■□□□□ 0.92
SCARB1-208ENST00000544327 UBE3CQ15386 1083 aa20.82■□□□□ 0.92
SCARB1-208ENST00000544327 MRVI1Q9Y6F6 885 aa20.82■□□□□ 0.92
SCARB1-208ENST00000544327 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.82■□□□□ 0.925e-9■■□□□ 11.6
SCARB1-208ENST00000544327 SLIT2O94813 1529 aa20.82■□□□□ 0.92
SCARB1-208ENST00000544327 NRAPQ86VF7 1730 aa20.82■□□□□ 0.92
SCARB1-208ENST00000544327 CARMIL3Q8ND23 1372 aa20.81■□□□□ 0.92
SCARB1-208ENST00000544327 MROH5Q6ZUA9 1318 aa20.81■□□□□ 0.92
SCARB1-208ENST00000544327 UQCRFS1P1P0C7P4 283 aa20.81■□□□□ 0.92
SCARB1-208ENST00000544327 CCT2P78371 535 aaKnown RBP20.81■□□□□ 0.92
SCARB1-208ENST00000544327 ZNF396Q96N95 335 aaPredicted RBP20.81■□□□□ 0.92
SCARB1-208ENST00000544327 FGFR2P21802 821 aa20.81■□□□□ 0.92
SCARB1-208ENST00000544327 PI16Q6UXB8 463 aa20.81■□□□□ 0.92
SCARB1-208ENST00000544327 NCOA7Q8NI08 942 aa20.81■□□□□ 0.92
SCARB1-208ENST00000544327 PRC1O43663 620 aa20.8■□□□□ 0.92
SCARB1-208ENST00000544327 EIF5P55010 431 aaKnown RBP20.8■□□□□ 0.92
SCARB1-208ENST00000544327 BICD2Q8TD16 824 aa20.8■□□□□ 0.92
SCARB1-208ENST00000544327 NCOA5Q9HCD5 579 aaKnown RBP20.8■□□□□ 0.92
SCARB1-208ENST00000544327 ZNF213O14771 459 aa20.79■□□□□ 0.92
SCARB1-208ENST00000544327 NR1I2O75469 434 aa20.79■□□□□ 0.92
SCARB1-208ENST00000544327 PUM3Q15397 648 aaKnown RBP20.79■□□□□ 0.92
SCARB1-208ENST00000544327 CHST3Q7LGC8 479 aa20.79■□□□□ 0.92
SCARB1-208ENST00000544327 THRAP3Q9Y2W1 955 aaKnown RBP20.79■□□□□ 0.92
SCARB1-208ENST00000544327 DOCK2Q92608 1830 aa20.79■□□□□ 0.92
SCARB1-208ENST00000544327 LAMB2P55268 1798 aa20.79■□□□□ 0.92
SCARB1-208ENST00000544327 DHX16O60231 1041 aaKnown RBP20.78■□□□□ 0.92
SCARB1-208ENST00000544327 FDPSP14324 419 aaKnown RBP20.78■□□□□ 0.92
SCARB1-208ENST00000544327 ANTXR2P58335 489 aa20.78■□□□□ 0.92
SCARB1-208ENST00000544327 LPIN2Q92539 896 aa20.78■□□□□ 0.92
SCARB1-208ENST00000544327 PIH1D3Q9NQM4 214 aaKnown RBP20.78■□□□□ 0.92
SCARB1-208ENST00000544327 ZMYM6O95789 1325 aa20.78■□□□□ 0.92
SCARB1-208ENST00000544327 C4AP0C0L4 1744 aa20.78■□□□□ 0.92
SCARB1-208ENST00000544327 C4BP0C0L5 1744 aa20.78■□□□□ 0.92
SCARB1-208ENST00000544327 CAVIN2O95810 425 aa20.78■□□□□ 0.92
SCARB1-208ENST00000544327 HAND2P61296 217 aa20.78■□□□□ 0.92
SCARB1-208ENST00000544327 KIAA2012Q0VF49 1180 aa20.78■□□□□ 0.92
SCARB1-208ENST00000544327 CAMK4Q16566 473 aa20.78■□□□□ 0.92
SCARB1-208ENST00000544327 CCDC102BQ68D86 513 aa20.78■□□□□ 0.92
SCARB1-208ENST00000544327 TBC1D2BQ9UPU7 963 aa20.78■□□□□ 0.92
SCARB1-208ENST00000544327 PHLPP1O60346 1717 aa20.77■□□□□ 0.92
SCARB1-208ENST00000544327 AP5Z1O43299 807 aa20.77■□□□□ 0.92
SCARB1-208ENST00000544327 TPM3P06753 285 aa20.77■□□□□ 0.92
SCARB1-208ENST00000544327 INTS5Q6P9B9 1019 aaKnown RBP20.77■□□□□ 0.92
SCARB1-208ENST00000544327 RALYLQ86SE5 291 aaKnown RBP20.77■□□□□ 0.92
SCARB1-208ENST00000544327 HPS5Q9UPZ3 1129 aa20.77■□□□□ 0.92
SCARB1-208ENST00000544327 RTL9Q8NET4 1388 aa20.77■□□□□ 0.92
SCARB1-208ENST00000544327 TCRBV5S4A2TA0A5A2 114 aa20.76■□□□□ 0.91
SCARB1-208ENST00000544327 CTAGE5O15320 804 aa20.76■□□□□ 0.91
SCARB1-208ENST00000544327 SLC9C2Q5TAH2 1124 aa20.76■□□□□ 0.91
SCARB1-208ENST00000544327 ILDR1Q86SU0 546 aaPredicted RBP20.76■□□□□ 0.91
SCARB1-208ENST00000544327 NBPF3Q9H094 633 aa20.76■□□□□ 0.91
SCARB1-208ENST00000544327 MYO5AQ9Y4I1 1855 aaKnown RBP20.76■□□□□ 0.91
SCARB1-208ENST00000544327 PHKA1P46020 1223 aa20.76■□□□□ 0.91
SCARB1-208ENST00000544327 ALX1Q15699 326 aa20.76■□□□□ 0.91
SCARB1-208ENST00000544327 SYTL4Q96C24 671 aaPredicted RBP20.76■□□□□ 0.91
SCARB1-208ENST00000544327 USP28Q96RU2 1077 aa20.76■□□□□ 0.91
SCARB1-208ENST00000544327 GPHNQ9NQX3 736 aaPredicted RBP20.76■□□□□ 0.91
SCARB1-208ENST00000544327 CCDC87Q9NVE4 849 aa20.76■□□□□ 0.91
SCARB1-208ENST00000544327 SPATA31A1Q5TZJ5 1347 aa20.75■□□□□ 0.91
SCARB1-208ENST00000544327 KLF18A0A0U1RQI7 1052 aa20.75■□□□□ 0.91
SCARB1-208ENST00000544327 PDE6AP16499 860 aa20.75■□□□□ 0.91
SCARB1-208ENST00000544327 CKAP2LQ8IYA6 745 aa20.75■□□□□ 0.91
SCARB1-208ENST00000544327 NAP1L2Q9ULW6 460 aaPredicted RBP20.75■□□□□ 0.91
SCARB1-208ENST00000544327 GOLGA8BA8MQT2 603 aa20.74■□□□□ 0.91
SCARB1-208ENST00000544327 ANO6Q4KMQ2 910 aa20.74■□□□□ 0.91
SCARB1-208ENST00000544327 PARP10Q53GL7 1025 aa20.74■□□□□ 0.91
SCARB1-208ENST00000544327 TDRD7Q8NHU6 1098 aaKnown RBP20.74■□□□□ 0.91
SCARB1-208ENST00000544327 PIBF1Q8WXW3 757 aa20.74■□□□□ 0.91
SCARB1-208ENST00000544327 CBX8Q9HC52 389 aa20.74■□□□□ 0.91
SCARB1-208ENST00000544327 RTEL1Q9NZ71 1219 aa20.74■□□□□ 0.91
SCARB1-208ENST00000544327 ZNF532Q9HCE3 1301 aa20.74■□□□□ 0.91
SCARB1-208ENST00000544327 SLC5A1P13866 664 aa20.74■□□□□ 0.91
SCARB1-208ENST00000544327 SUSD4Q5VX71 490 aa20.74■□□□□ 0.91
SCARB1-208ENST00000544327 SASS6Q6UVJ0 657 aa20.74■□□□□ 0.91
SCARB1-208ENST00000544327 CCAR1Q8IX12 1150 aaKnown RBP20.73■□□□□ 0.91
SCARB1-208ENST00000544327 UTP14AQ9BVJ6 771 aaKnown RBP20.73■□□□□ 0.91
SCARB1-208ENST00000544327 TIAM2Q8IVF5 1701 aa20.73■□□□□ 0.91
SCARB1-208ENST00000544327 CAMTA2O94983 1202 aa20.72■□□□□ 0.91
SCARB1-208ENST00000544327 FOSBP53539 338 aa20.72■□□□□ 0.91
SCARB1-208ENST00000544327 TRDNQ13061 729 aa20.72■□□□□ 0.91
SCARB1-208ENST00000544327 ENGASEQ8NFI3 743 aa20.72■□□□□ 0.91
SCARB1-208ENST00000544327 C8orf76Q96K31 380 aa20.72■□□□□ 0.91
SCARB1-208ENST00000544327 STRBPQ96SI9 672 aaKnown RBP20.72■□□□□ 0.91
SCARB1-208ENST00000544327 IDH1O75874 414 aaKnown RBP20.71■□□□□ 0.91
SCARB1-208ENST00000544327 SNW1Q13573 536 aaKnown RBP20.71■□□□□ 0.91
SCARB1-208ENST00000544327 BRAPQ7Z569 592 aa20.71■□□□□ 0.91
SCARB1-208ENST00000544327 TBC1D10CQ8IV04 446 aa20.71■□□□□ 0.91
SCARB1-208ENST00000544327 FBXO18Q8NFZ0 1043 aa20.71■□□□□ 0.91
SCARB1-208ENST00000544327 WWC3Q9ULE0 1092 aa20.71■□□□□ 0.91
SCARB1-208ENST00000544327 ANGEL1Q9UNK9 670 aaKnown RBP20.71■□□□□ 0.91
SCARB1-208ENST00000544327 ZNF831Q5JPB2 1677 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms