RNA–Protein interactions for RNA: ENST00000543449.1

NPIPB4-217, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 685 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-217ENST00000543449 FAM84BQ96KN1 310 aaPredicted RBP12.8□□□□□ -0.36
NPIPB4-217ENST00000543449 ZNF408Q9H9D4 720 aa12.8□□□□□ -0.36
NPIPB4-217ENST00000543449 CEP126Q9P2H0 1117 aa12.8□□□□□ -0.36
NPIPB4-217ENST00000543449 LRRFIP2Q9Y608 721 aaKnown RBP12.8□□□□□ -0.36
NPIPB4-217ENST00000543449 WDR33Q9C0J8 1336 aaKnown RBP12.8□□□□□ -0.36
NPIPB4-217ENST00000543449 EGFRP00533 1210 aa12.79□□□□□ -0.36
NPIPB4-217ENST00000543449 GNAI2P04899 355 aa12.79□□□□□ -0.36
NPIPB4-217ENST00000543449 MAP2K2P36507 400 aa12.79□□□□□ -0.36
NPIPB4-217ENST00000543449 RFX5P48382 616 aaPredicted RBP12.79□□□□□ -0.36
NPIPB4-217ENST00000543449 MTX1Q13505 466 aa12.79□□□□□ -0.36
NPIPB4-217ENST00000543449 LRRC24Q50LG9 513 aa12.79□□□□□ -0.36
NPIPB4-217ENST00000543449 FBXO33Q7Z6M2 555 aa12.79□□□□□ -0.36
NPIPB4-217ENST00000543449 KIAA0825Q8IV33 1275 aa12.79□□□□□ -0.36
NPIPB4-217ENST00000543449 VGLL2Q8N8G2 317 aa12.79□□□□□ -0.36
NPIPB4-217ENST00000543449 MEIS3Q99687 375 aa12.79□□□□□ -0.36
NPIPB4-217ENST00000543449 GBA2Q9HCG7 927 aaPredicted RBP12.79□□□□□ -0.36
NPIPB4-217ENST00000543449 COPRSQ9NQ92 184 aa12.79□□□□□ -0.36
NPIPB4-217ENST00000543449 GNL3LQ9NVN8 582 aaKnown RBP12.79□□□□□ -0.36
NPIPB4-217ENST00000543449 SNAP23O00161 211 aa12.78□□□□□ -0.36
NPIPB4-217ENST00000543449 WNT10BO00744 389 aa12.78□□□□□ -0.36
NPIPB4-217ENST00000543449 HSPA1AP0DMV8 641 aaKnown RBP12.78□□□□□ -0.36
NPIPB4-217ENST00000543449 HSPA1BP0DMV9 641 aaKnown RBP12.78□□□□□ -0.36
NPIPB4-217ENST00000543449 GYG1P46976 350 aa12.78□□□□□ -0.36
NPIPB4-217ENST00000543449 CAPNS2Q96L46 248 aa12.78□□□□□ -0.36
NPIPB4-217ENST00000543449 BEGAINQ9BUH8 593 aa12.78□□□□□ -0.36
NPIPB4-217ENST00000543449 SUGT1Q9Y2Z0 365 aa12.78□□□□□ -0.36
NPIPB4-217ENST00000543449 PPP2R3BQ9Y5P8 575 aa12.78□□□□□ -0.36
NPIPB4-217ENST00000543449 MAST3O60307 1309 aa12.78□□□□□ -0.36
NPIPB4-217ENST00000543449 COL1A1P02452 1464 aaPredicted RBP12.78□□□□□ -0.36
NPIPB4-217ENST00000543449 A0A1B0GUL6 1792 aa12.77□□□□□ -0.36
NPIPB4-217ENST00000543449 ZBTB22O15209 634 aa12.77□□□□□ -0.37
NPIPB4-217ENST00000543449 SRGAP3O43295 1099 aa12.77□□□□□ -0.37
NPIPB4-217ENST00000543449 FGFR2P21802 821 aa12.77□□□□□ -0.37
NPIPB4-217ENST00000543449 HUNKP57058 714 aa12.77□□□□□ -0.37
NPIPB4-217ENST00000543449 MFSD14BQ5SR56 506 aa12.77□□□□□ -0.37
NPIPB4-217ENST00000543449 DZIP1LQ8IYY4 767 aaKnown RBP12.77□□□□□ -0.37
NPIPB4-217ENST00000543449 KLHDC4Q8TBB5 520 aa12.77□□□□□ -0.37
NPIPB4-217ENST00000543449 CCDC102AQ96A19 550 aa12.77□□□□□ -0.37
NPIPB4-217ENST00000543449 CDCA5Q96FF9 252 aa12.77□□□□□ -0.37
NPIPB4-217ENST00000543449 CHMP4BQ9H444 224 aaKnown RBP12.77□□□□□ -0.37
NPIPB4-217ENST00000543449 AKAP2Q9Y2D5 859 aa12.77□□□□□ -0.37
NPIPB4-217ENST00000543449 ADM5C9JUS6 153 aa12.76□□□□□ -0.37
NPIPB4-217ENST00000543449 SEMA3EO15041 775 aa12.76□□□□□ -0.37
NPIPB4-217ENST00000543449 CA12O43570 354 aa12.76□□□□□ -0.37
NPIPB4-217ENST00000543449 HDLBPQ00341 1268 aaKnown RBP12.76□□□□□ -0.37
NPIPB4-217ENST00000543449 FMR1Q06787 632 aaKnown RBP eCLIP12.76□□□□□ -0.37
NPIPB4-217ENST00000543449 NOGQ13253 232 aa12.76□□□□□ -0.37
NPIPB4-217ENST00000543449 TNFAIP1Q13829 316 aa12.76□□□□□ -0.37
NPIPB4-217ENST00000543449 NBPF9Q3BBW0 867 aa12.76□□□□□ -0.37
NPIPB4-217ENST00000543449 REM2Q8IYK8 340 aaPredicted RBP12.76□□□□□ -0.37
NPIPB4-217ENST00000543449 CLUAP1Q96AJ1 413 aa12.76□□□□□ -0.37
NPIPB4-217ENST00000543449 ZBED3Q96IU2 234 aaPredicted RBP12.76□□□□□ -0.37
NPIPB4-217ENST00000543449 MXD3Q9BW11 206 aa12.76□□□□□ -0.37
NPIPB4-217ENST00000543449 MRIQ9BWK5 157 aa12.76□□□□□ -0.37
NPIPB4-217ENST00000543449 SERPINA10Q9UK55 444 aa12.76□□□□□ -0.37
NPIPB4-217ENST00000543449 CTCFP49711 727 aaPredicted RBP12.75□□□□□ -0.37
NPIPB4-217ENST00000543449 ATP2B3Q16720 1220 aa12.75□□□□□ -0.37
NPIPB4-217ENST00000543449 CFAP100Q494V2 611 aa12.75□□□□□ -0.37
NPIPB4-217ENST00000543449 RGMBQ6NW40 437 aa12.75□□□□□ -0.37
NPIPB4-217ENST00000543449 ATG9AQ7Z3C6 839 aa12.75□□□□□ -0.37
NPIPB4-217ENST00000543449 CERS5Q8N5B7 392 aa12.75□□□□□ -0.37
NPIPB4-217ENST00000543449 WDR66Q8TBY9 1149 aa12.75□□□□□ -0.37
NPIPB4-217ENST00000543449 SIL1Q9H173 461 aa12.75□□□□□ -0.37
NPIPB4-217ENST00000543449 WBP1LQ9NX94 342 aa12.75□□□□□ -0.37
NPIPB4-217ENST00000543449 SPDYE2BA6NHP3 402 aa12.74□□□□□ -0.37
NPIPB4-217ENST00000543449 SPDYE6P0CI01 402 aa12.74□□□□□ -0.37
NPIPB4-217ENST00000543449 RBM5P52756 815 aaKnown RBP eCLIP12.74□□□□□ -0.37
NPIPB4-217ENST00000543449 CYP4F22Q6NT55 531 aa12.74□□□□□ -0.37
NPIPB4-217ENST00000543449 ARMC9Q7Z3E5 817 aa12.74□□□□□ -0.37
NPIPB4-217ENST00000543449 ITPRIPQ8IWB1 547 aa12.74□□□□□ -0.37
NPIPB4-217ENST00000543449 ZGPATQ8N5A5 531 aaKnown RBP12.74□□□□□ -0.37
NPIPB4-217ENST00000543449 TMEM57Q8N5G2 664 aa12.74□□□□□ -0.37
NPIPB4-217ENST00000543449 TTF2Q9UNY4 1162 aaKnown RBP12.74□□□□□ -0.37
NPIPB4-217ENST00000543449 ASTN2O75129 1339 aaPredicted RBP12.73□□□□□ -0.37
NPIPB4-217ENST00000543449 UNCXA6NJT0 531 aa12.73□□□□□ -0.37
NPIPB4-217ENST00000543449 F8W031 263 aaPredicted RBP12.73□□□□□ -0.37
NPIPB4-217ENST00000543449 BCAMP50895 628 aa12.73□□□□□ -0.37
NPIPB4-217ENST00000543449 CHAF1AQ13111 956 aaPredicted RBP12.73□□□□□ -0.37
NPIPB4-217ENST00000543449 G3BP1Q13283 466 aaKnown RBP eCLIP12.73□□□□□ -0.37
NPIPB4-217ENST00000543449 SUPT20HL1Q3ZLR7 823 aa12.73□□□□□ -0.37
NPIPB4-217ENST00000543449 PRDM10Q9NQV6 1147 aa12.73□□□□□ -0.37
NPIPB4-217ENST00000543449 DENND2AQ9ULE3 1009 aa12.73□□□□□ -0.37
NPIPB4-217ENST00000543449 ZNF646O15015 1829 aaPredicted RBP12.72□□□□□ -0.37
NPIPB4-217ENST00000543449 TNNI2P48788 182 aa12.72□□□□□ -0.37
NPIPB4-217ENST00000543449 ZNF157P51786 506 aaPredicted RBP12.72□□□□□ -0.37
NPIPB4-217ENST00000543449 GRM1Q13255 1194 aa12.72□□□□□ -0.37
NPIPB4-217ENST00000543449 MVPQ14764 893 aaKnown RBP12.72□□□□□ -0.37
NPIPB4-217ENST00000543449 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.72□□□□□ -0.37
NPIPB4-217ENST00000543449 TEKT1Q969V4 418 aa12.72□□□□□ -0.37
NPIPB4-217ENST00000543449 DEFB129Q9H1M3 183 aa12.72□□□□□ -0.37
NPIPB4-217ENST00000543449 TMOD2Q9NZR1 351 aa12.72□□□□□ -0.37
NPIPB4-217ENST00000543449 PAPPA2Q9BXP8 1791 aa12.71□□□□□ -0.37
NPIPB4-217ENST00000543449 PDS5AQ29RF7 1337 aaKnown RBP12.71□□□□□ -0.37
NPIPB4-217ENST00000543449 THSD7BQ9C0I4 1608 aa12.71□□□□□ -0.37
NPIPB4-217ENST00000543449 PPP1R12BO60237 982 aaPredicted RBP12.71□□□□□ -0.37
NPIPB4-217ENST00000543449 CRKP46108 304 aa12.71□□□□□ -0.37
NPIPB4-217ENST00000543449 ATP8B2P98198 1209 aa12.71□□□□□ -0.37
NPIPB4-217ENST00000543449 TTLL12Q14166 644 aaPredicted RBP12.71□□□□□ -0.37
NPIPB4-217ENST00000543449 HOOK2Q96ED9 719 aa12.71□□□□□ -0.37
NPIPB4-217ENST00000543449 PA2G4Q9UQ80 394 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms