RNA–Protein interactions for RNA: ENST00000541416.5

SNHG1-216, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 996 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-216ENST00000541416 FLIIQ13045 1269 aa15.62■□□□□ 0.09
SNHG1-216ENST00000541416 IFIT5Q13325 482 aaKnown RBP15.62■□□□□ 0.09
SNHG1-216ENST00000541416 CCDC27Q2M243 656 aa15.62■□□□□ 0.09
SNHG1-216ENST00000541416 C15orf52Q6ZUT6 534 aaKnown RBP15.62■□□□□ 0.09
SNHG1-216ENST00000541416 ERO1AQ96HE7 468 aa15.62■□□□□ 0.09
SNHG1-216ENST00000541416 CENPFP49454 3210 aa15.62■□□□□ 0.09
SNHG1-216ENST00000541416 HTTP42858 3142 aa15.61■□□□□ 0.09
SNHG1-216ENST00000541416 KLRK1P26718 216 aa15.61■□□□□ 0.09
SNHG1-216ENST00000541416 TNFAIP1Q13829 316 aa15.61■□□□□ 0.09
SNHG1-216ENST00000541416 DNAAF4Q8WXU2 420 aa15.61■□□□□ 0.09
SNHG1-216ENST00000541416 WNK4Q96J92 1243 aa15.61■□□□□ 0.09
SNHG1-216ENST00000541416 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.61■□□□□ 0.09
SNHG1-216ENST00000541416 ECM29Q5VYK3 1845 aa15.61■□□□□ 0.09
SNHG1-216ENST00000541416 MKI67P46013 3256 aaKnown RBP15.6■□□□□ 0.09
SNHG1-216ENST00000541416 RBM5P52756 815 aaKnown RBP eCLIP15.6■□□□□ 0.09
SNHG1-216ENST00000541416 ARHGEF6Q15052 776 aa15.6■□□□□ 0.09
SNHG1-216ENST00000541416 TAF7LQ5H9L4 462 aa15.6■□□□□ 0.09
SNHG1-216ENST00000541416 VEZTQ9HBM0 779 aa15.6■□□□□ 0.09
SNHG1-216ENST00000541416 CHMP3Q9Y3E7 222 aa15.6■□□□□ 0.09
SNHG1-216ENST00000541416 CACNA1FO60840 1977 aa15.6■□□□□ 0.09
SNHG1-216ENST00000541416 SPDYE2BA6NHP3 402 aa15.59■□□□□ 0.09
SNHG1-216ENST00000541416 F8W031 263 aaPredicted RBP15.59■□□□□ 0.09
SNHG1-216ENST00000541416 SPDYE6P0CI01 402 aa15.59■□□□□ 0.09
SNHG1-216ENST00000541416 IL1R1P14778 569 aa15.59■□□□□ 0.09
SNHG1-216ENST00000541416 CASP7P55210 303 aa15.59■□□□□ 0.09
SNHG1-216ENST00000541416 CFAP100Q494V2 611 aa15.59■□□□□ 0.09
SNHG1-216ENST00000541416 G2E3Q7L622 706 aa15.59■□□□□ 0.09
SNHG1-216ENST00000541416 OTOP1Q7RTM1 612 aa15.59■□□□□ 0.09
SNHG1-216ENST00000541416 ANKRD13AQ8IZ07 590 aa15.59■□□□□ 0.09
SNHG1-216ENST00000541416 R3HDMLQ9H3Y0 253 aa15.59■□□□□ 0.09
SNHG1-216ENST00000541416 IL16Q14005 1332 aa15.59■□□□□ 0.09
SNHG1-216ENST00000541416 CLRN2A0PK11 232 aa15.58■□□□□ 0.08
SNHG1-216ENST00000541416 TAF5LO75529 589 aa15.58■□□□□ 0.08
SNHG1-216ENST00000541416 CCDC57Q2TAC2 916 aa15.58■□□□□ 0.08
SNHG1-216ENST00000541416 WWC1Q8IX03 1113 aa15.58■□□□□ 0.08
SNHG1-216ENST00000541416 CERS5Q8N5B7 392 aa15.58■□□□□ 0.08
SNHG1-216ENST00000541416 WDHD1O75717 1129 aaPredicted RBP15.57■□□□□ 0.08
SNHG1-216ENST00000541416 NCBP3Q53F19 620 aaKnown RBP15.57■□□□□ 0.08
SNHG1-216ENST00000541416 CLMNQ96JQ2 1002 aa15.57■□□□□ 0.08
SNHG1-216ENST00000541416 EFCC1Q9HA90 598 aa15.57■□□□□ 0.08
SNHG1-216ENST00000541416 FZD1Q9UP38 647 aa15.57■□□□□ 0.08
SNHG1-216ENST00000541416 LAMB1P07942 1786 aa15.57■□□□□ 0.08
SNHG1-216ENST00000541416 IGF2BP3O00425 579 aaKnown RBP eCLIP15.56■□□□□ 0.08
SNHG1-216ENST00000541416 SP3Q02447 781 aa15.56■□□□□ 0.08
SNHG1-216ENST00000541416 RASA3Q14644 834 aa15.56■□□□□ 0.08
SNHG1-216ENST00000541416 LDHAL6AQ6ZMR3 332 aa15.56■□□□□ 0.08
SNHG1-216ENST00000541416 HELBQ8NG08 1087 aaPredicted RBP15.56■□□□□ 0.08
SNHG1-216ENST00000541416 PRMT6Q96LA8 375 aaPredicted RBP15.56■□□□□ 0.08
SNHG1-216ENST00000541416 CNNM1Q9NRU3 951 aa15.56■□□□□ 0.08
SNHG1-216ENST00000541416 PTPN22Q9Y2R2 807 aa15.56■□□□□ 0.08
SNHG1-216ENST00000541416 TNNI2P48788 182 aa15.55■□□□□ 0.08
SNHG1-216ENST00000541416 CRHR2Q13324 411 aa15.55■□□□□ 0.08
SNHG1-216ENST00000541416 NBPF12Q5TAG4 269 aaPredicted RBP15.55■□□□□ 0.08
SNHG1-216ENST00000541416 TMEM106CQ9BVX2 250 aa15.55■□□□□ 0.08
SNHG1-216ENST00000541416 SERPINA10Q9UK55 444 aa15.55■□□□□ 0.08
SNHG1-216ENST00000541416 SSC5DA1L4H1 1573 aa15.54■□□□□ 0.08
SNHG1-216ENST00000541416 IRS2Q9Y4H2 1338 aa15.54■□□□□ 0.08
SNHG1-216ENST00000541416 TESPA1A2RU30 521 aaPredicted RBP15.54■□□□□ 0.08
SNHG1-216ENST00000541416 PLIN1O60240 522 aa15.54■□□□□ 0.08
SNHG1-216ENST00000541416 USP2O75604 605 aaPredicted RBP15.54■□□□□ 0.08
SNHG1-216ENST00000541416 FOXO4P98177 505 aa15.54■□□□□ 0.08
SNHG1-216ENST00000541416 LMBR1LQ6UX01 489 aa15.54■□□□□ 0.08
SNHG1-216ENST00000541416 NBPF11Q86T75 865 aa15.54■□□□□ 0.08
SNHG1-216ENST00000541416 CD99L2Q8TCZ2 262 aa15.54■□□□□ 0.08
SNHG1-216ENST00000541416 FAM205AQ6ZU69 1335 aa15.53■□□□□ 0.08
SNHG1-216ENST00000541416 SNAP23O00161 211 aa15.53■□□□□ 0.08
SNHG1-216ENST00000541416 UBE4AQ14139 1066 aa15.53■□□□□ 0.08
SNHG1-216ENST00000541416 MFSD14BQ5SR56 506 aa15.53■□□□□ 0.08
SNHG1-216ENST00000541416 ARMC5Q96C12 935 aa15.53■□□□□ 0.08
SNHG1-216ENST00000541416 OPTNQ96CV9 577 aa15.53■□□□□ 0.08
SNHG1-216ENST00000541416 C9orf78Q9NZ63 289 aaPredicted RBP15.53■□□□□ 0.08
SNHG1-216ENST00000541416 TTF2Q9UNY4 1162 aaKnown RBP15.53■□□□□ 0.08
SNHG1-216ENST00000541416 CSADQ9Y600 493 aa15.53■□□□□ 0.08
SNHG1-216ENST00000541416 RBBP6Q7Z6E9 1792 aaKnown RBP15.52■□□□□ 0.08
SNHG1-216ENST00000541416 FANCIQ9NVI1 1328 aa15.52■□□□□ 0.08
SNHG1-216ENST00000541416 POTEFA5A3E0 1075 aa15.52■□□□□ 0.08
SNHG1-216ENST00000541416 GRM8O00222 908 aa15.52■□□□□ 0.08
SNHG1-216ENST00000541416 HIBADHP31937 336 aaKnown RBP15.52■□□□□ 0.08
SNHG1-216ENST00000541416 GTF2A2P52657 109 aa15.52■□□□□ 0.08
SNHG1-216ENST00000541416 SPDYE2Q495Y8 402 aa15.52■□□□□ 0.08
SNHG1-216ENST00000541416 ELP3Q9H9T3 547 aa15.52■□□□□ 0.08
SNHG1-216ENST00000541416 ZFYVE28Q9HCC9 887 aa15.52■□□□□ 0.08
SNHG1-216ENST00000541416 JAG2Q9Y219 1238 aa15.52■□□□□ 0.08
SNHG1-216ENST00000541416 PCDHAC2Q9Y5I4 1007 aa15.52■□□□□ 0.08
SNHG1-216ENST00000541416 A0A1B0GUL6 1792 aa15.52■□□□□ 0.07
SNHG1-216ENST00000541416 BEND3Q5T5X7 828 aa15.51■□□□□ 0.07
SNHG1-216ENST00000541416 VPS37DQ86XT2 251 aa15.51■□□□□ 0.07
SNHG1-216ENST00000541416 WDR63Q8IWG1 891 aa15.51■□□□□ 0.07
SNHG1-216ENST00000541416 HOOK2Q96ED9 719 aa15.51■□□□□ 0.07
SNHG1-216ENST00000541416 ZNF70Q9UC06 446 aaPredicted RBP15.51■□□□□ 0.07
SNHG1-216ENST00000541416 BRCA2P51587 3418 aa15.5■□□□□ 0.07
SNHG1-216ENST00000541416 VAMP4O75379 141 aa15.5■□□□□ 0.07
SNHG1-216ENST00000541416 GJA5P36382 358 aa15.5■□□□□ 0.07
SNHG1-216ENST00000541416 KIF22Q14807 665 aa15.5■□□□□ 0.07
SNHG1-216ENST00000541416 TAF1CQ15572 869 aaPredicted RBP15.5■□□□□ 0.07
SNHG1-216ENST00000541416 SLC9C1Q4G0N8 1177 aa15.5■□□□□ 0.07
SNHG1-216ENST00000541416 HABP4Q5JVS0 413 aaKnown RBP15.5■□□□□ 0.07
SNHG1-216ENST00000541416 DZIP1LQ8IYY4 767 aaKnown RBP15.5■□□□□ 0.07
SNHG1-216ENST00000541416 TDRD7Q8NHU6 1098 aaKnown RBP15.5■□□□□ 0.07
SNHG1-216ENST00000541416 TDRD3Q9H7E2 651 aaKnown RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms