RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 USPL1Q5W0Q7 1092 aa14.8□□□□□ -0.04
DDX55-206ENST00000539934 KCNV2Q8TDN2 545 aa14.8□□□□□ -0.04
DDX55-206ENST00000539934 LARP6Q9BRS8 491 aaKnown RBP14.8□□□□□ -0.04
DDX55-206ENST00000539934 DBF4Q9UBU7 674 aaPredicted RBP14.8□□□□□ -0.04
DDX55-206ENST00000539934 JRKLQ9Y4A0 524 aa14.8□□□□□ -0.04
DDX55-206ENST00000539934 USP42Q9H9J4 1324 aaKnown RBP14.8□□□□□ -0.04
DDX55-206ENST00000539934 SPDYE4A6NLX3 237 aa14.8□□□□□ -0.04
DDX55-206ENST00000539934 GOLGA6L6A8MZA4 724 aa14.8□□□□□ -0.04
DDX55-206ENST00000539934 POLRMTO00411 1230 aaKnown RBP14.8□□□□□ -0.04
DDX55-206ENST00000539934 ATP2B1P20020 1258 aa14.8□□□□□ -0.04
DDX55-206ENST00000539934 ZNF790Q6PG37 636 aa14.8□□□□□ -0.04
DDX55-206ENST00000539934 MKRN1Q9UHC7 482 aaKnown RBP14.8□□□□□ -0.04
DDX55-206ENST00000539934 HEG1Q9ULI3 1381 aa14.79□□□□□ -0.04
DDX55-206ENST00000539934 COL5A3P25940 1745 aaPredicted RBP14.79□□□□□ -0.04
DDX55-206ENST00000539934 GNAI3P08754 354 aa14.79□□□□□ -0.04
DDX55-206ENST00000539934 CHAF1AQ13111 956 aaPredicted RBP14.79□□□□□ -0.04
DDX55-206ENST00000539934 SLC39A6Q13433 755 aa14.79□□□□□ -0.04
DDX55-206ENST00000539934 MRC1P22897 1456 aa14.79□□□□□ -0.04
DDX55-206ENST00000539934 ERVV-2B6SEH9 535 aa14.78□□□□□ -0.04
DDX55-206ENST00000539934 ANXA1P04083 346 aa14.78□□□□□ -0.04
DDX55-206ENST00000539934 GNAI2P04899 355 aa14.78□□□□□ -0.04
DDX55-206ENST00000539934 MAGEA8P43361 318 aa14.78□□□□□ -0.04
DDX55-206ENST00000539934 NEXNQ0ZGT2 675 aa14.78□□□□□ -0.04
DDX55-206ENST00000539934 DCTPP1Q9H773 170 aa14.78□□□□□ -0.04
DDX55-206ENST00000539934 GOLGA6L22H0YM25 854 aa14.78□□□□□ -0.04
DDX55-206ENST00000539934 EPB41L2O43491 1005 aaKnown RBP14.78□□□□□ -0.04
DDX55-206ENST00000539934 HMMRO75330 724 aa14.78□□□□□ -0.04
DDX55-206ENST00000539934 VEGFAP15692 232 aaPredicted RBP14.78□□□□□ -0.04
DDX55-206ENST00000539934 TTC5Q8N0Z6 440 aa14.78□□□□□ -0.04
DDX55-206ENST00000539934 CACTIN-AS1Q8N1I8 211 aa14.78□□□□□ -0.04
DDX55-206ENST00000539934 CCDC24Q8N4L8 307 aa14.78□□□□□ -0.04
DDX55-206ENST00000539934 GOLGA6L1Q8N7Z2 621 aa14.78□□□□□ -0.04
DDX55-206ENST00000539934 SYNRGQ9UMZ2 1314 aa14.78□□□□□ -0.04
DDX55-206ENST00000539934 PRAMEF22A3QJZ6 481 aa14.77□□□□□ -0.04
DDX55-206ENST00000539934 CCP110O43303 1012 aa14.77□□□□□ -0.04
DDX55-206ENST00000539934 FAM163BP0C2L3 166 aa14.77□□□□□ -0.04
DDX55-206ENST00000539934 POTEIP0CG38 1075 aa14.77□□□□□ -0.04
DDX55-206ENST00000539934 POTEJP0CG39 1038 aa14.77□□□□□ -0.04
DDX55-206ENST00000539934 SETSIPP0DME0 302 aa14.77□□□□□ -0.04
DDX55-206ENST00000539934 GLTPD2A6NH11 291 aa14.77□□□□□ -0.05
DDX55-206ENST00000539934 IRX1P78414 480 aaPredicted RBP14.77□□□□□ -0.05
DDX55-206ENST00000539934 INTS5Q6P9B9 1019 aaKnown RBP14.77□□□□□ -0.05
DDX55-206ENST00000539934 DEF6Q9H4E7 631 aa14.77□□□□□ -0.05
DDX55-206ENST00000539934 PI4KAP2A4QPH2 592 aa14.76□□□□□ -0.05
DDX55-206ENST00000539934 POTECB2RU33 542 aa14.76□□□□□ -0.05
DDX55-206ENST00000539934 EIF3JO75822 258 aaKnown RBP14.76□□□□□ -0.05
DDX55-206ENST00000539934 BICDL1Q6ZP65 573 aa14.76□□□□□ -0.05
DDX55-206ENST00000539934 DNAJC10Q8IXB1 793 aa14.76□□□□□ -0.05
DDX55-206ENST00000539934 PI4KAP1Q8N8J0 262 aa14.76□□□□□ -0.05
DDX55-206ENST00000539934 DNAAF4Q8WXU2 420 aa14.76□□□□□ -0.05
DDX55-206ENST00000539934 ARPC5LQ9BPX5 153 aa14.76□□□□□ -0.05
DDX55-206ENST00000539934 SRCIN1Q9C0H9 1055 aa14.76□□□□□ -0.05
DDX55-206ENST00000539934 CCDC88AQ3V6T2 1871 aa14.76□□□□□ -0.05
DDX55-206ENST00000539934 TNRC6CQ9HCJ0 1690 aaKnown RBP14.76□□□□□ -0.05
DDX55-206ENST00000539934 IBTKQ9P2D0 1353 aaPredicted RBP14.76□□□□□ -0.05
DDX55-206ENST00000539934 ZPR1O75312 459 aa14.76□□□□□ -0.05
DDX55-206ENST00000539934 LMNB1P20700 586 aa14.76□□□□□ -0.05
DDX55-206ENST00000539934 PAX3P23760 479 aa14.76□□□□□ -0.05
DDX55-206ENST00000539934 TM4SF1P30408 202 aa14.76□□□□□ -0.05
DDX55-206ENST00000539934 PUS10Q3MIT2 529 aaKnown RBP14.76□□□□□ -0.05
DDX55-206ENST00000539934 ANKRD7Q92527 254 aa14.76□□□□□ -0.05
DDX55-206ENST00000539934 TOMM22Q9NS69 142 aa14.76□□□□□ -0.05
DDX55-206ENST00000539934 ETAA1Q9NY74 926 aa14.76□□□□□ -0.05
DDX55-206ENST00000539934 CAND2O75155 1236 aa14.75□□□□□ -0.05
DDX55-206ENST00000539934 NFIXQ14938 502 aa14.75□□□□□ -0.05
DDX55-206ENST00000539934 MUM1L1Q5H9M0 696 aa14.75□□□□□ -0.05
DDX55-206ENST00000539934 GORABQ5T7V8 394 aa14.75□□□□□ -0.05
DDX55-206ENST00000539934 DZIP3Q86Y13 1208 aaKnown RBP14.75□□□□□ -0.05
DDX55-206ENST00000539934 FAM212AQ96EL1 285 aa14.75□□□□□ -0.05
DDX55-206ENST00000539934 PPFIA2O75334 1257 aa14.74□□□□□ -0.05
DDX55-206ENST00000539934 UBTFL1P0CB47 393 aaPredicted RBP14.74□□□□□ -0.05
DDX55-206ENST00000539934 NAT1P18440 290 aa14.74□□□□□ -0.05
DDX55-206ENST00000539934 EVI5LQ96CN4 794 aa14.74□□□□□ -0.05
DDX55-206ENST00000539934 HYPKQ9NX55 129 aa14.74□□□□□ -0.05
DDX55-206ENST00000539934 SUN2Q9UH99 717 aa14.74□□□□□ -0.05
DDX55-206ENST00000539934 NFKBIEO00221 500 aa14.74□□□□□ -0.05
DDX55-206ENST00000539934 SEC24BO95487 1268 aa14.74□□□□□ -0.05
DDX55-206ENST00000539934 PROSER3Q2NL68 480 aa14.74□□□□□ -0.05
DDX55-206ENST00000539934 TSGA10IPQ3SY00 556 aa14.74□□□□□ -0.05
DDX55-206ENST00000539934 ZNF496Q96IT1 587 aaPredicted RBP14.74□□□□□ -0.05
DDX55-206ENST00000539934 TMX1Q9H3N1 280 aa14.74□□□□□ -0.05
DDX55-206ENST00000539934 CARMIL3Q8ND23 1372 aa14.73□□□□□ -0.05
DDX55-206ENST00000539934 NAP1L1P55209 391 aaKnown RBP14.73□□□□□ -0.05
DDX55-206ENST00000539934 SUGP1Q8IWZ8 645 aaKnown RBP14.73□□□□□ -0.05
DDX55-206ENST00000539934 FMNL2Q96PY5 1086 aa14.73□□□□□ -0.05
DDX55-206ENST00000539934 USP44Q9H0E7 712 aa14.73□□□□□ -0.05
DDX55-206ENST00000539934 DDX21Q9NR30 783 aaKnown RBP eCLIP14.73□□□□□ -0.05
DDX55-206ENST00000539934 ZNF232Q9UNY5 417 aa14.73□□□□□ -0.05
DDX55-206ENST00000539934 ZKSCAN5Q9Y2L8 839 aa14.73□□□□□ -0.05
DDX55-206ENST00000539934 APBB1O00213 710 aa14.73□□□□□ -0.05
DDX55-206ENST00000539934 MCM4P33991 863 aa14.73□□□□□ -0.05
DDX55-206ENST00000539934 TATDN2Q93075 761 aa14.73□□□□□ -0.05
DDX55-206ENST00000539934 CHCHD3Q9NX63 227 aaKnown RBP14.73□□□□□ -0.05
DDX55-206ENST00000539934 LRRFIP2Q9Y608 721 aaKnown RBP14.73□□□□□ -0.05
DDX55-206ENST00000539934 SMAPO00193 183 aa14.72□□□□□ -0.05
DDX55-206ENST00000539934 DDX58O95786 925 aaKnown RBP14.72□□□□□ -0.05
DDX55-206ENST00000539934 SNRPA1P09661 255 aaKnown RBP14.72□□□□□ -0.05
DDX55-206ENST00000539934 BEND3Q5T5X7 828 aa14.72□□□□□ -0.05
DDX55-206ENST00000539934 C2CD5Q86YS7 1000 aa14.72□□□□□ -0.05
DDX55-206ENST00000539934 ZNF396Q96N95 335 aaPredicted RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms