RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 PODNQ7Z5L7 613 aa21.01■□□□□ 0.95
CLN6-202ENST00000538696 JDP2Q8WYK2 163 aa21.01■□□□□ 0.95
CLN6-202ENST00000538696 GNL3LQ9NVN8 582 aaKnown RBP21.01■□□□□ 0.95
CLN6-202ENST00000538696 ZNRF3Q9ULT6 936 aa21.01■□□□□ 0.95
CLN6-202ENST00000538696 RBM19Q9Y4C8 960 aaKnown RBP21.01■□□□□ 0.95
CLN6-202ENST00000538696 TTC41PQ6P2S7 1318 aa21■□□□□ 0.95
CLN6-202ENST00000538696 GSPT1P15170 499 aaKnown RBP21■□□□□ 0.95
CLN6-202ENST00000538696 MCAMP43121 646 aa21■□□□□ 0.95
CLN6-202ENST00000538696 PDE1AP54750 535 aa21■□□□□ 0.95
CLN6-202ENST00000538696 GPATCH3Q96I76 525 aa21■□□□□ 0.95
CLN6-202ENST00000538696 KCNQ5Q9NR82 932 aa21■□□□□ 0.95
CLN6-202ENST00000538696 STAP2Q9UGK3 403 aa21■□□□□ 0.95
CLN6-202ENST00000538696 AK9Q5TCS8 1911 aa20.99■□□□□ 0.95
CLN6-202ENST00000538696 FZD9O00144 591 aa20.99■□□□□ 0.95
CLN6-202ENST00000538696 SEMA3EO15041 775 aa20.99■□□□□ 0.95
CLN6-202ENST00000538696 ATP5JP18859 108 aa20.99■□□□□ 0.95
CLN6-202ENST00000538696 PI16Q6UXB8 463 aa20.99■□□□□ 0.95
CLN6-202ENST00000538696 PI4K2BQ8TCG2 481 aa20.99■□□□□ 0.95
CLN6-202ENST00000538696 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.99■□□□□ 0.95
CLN6-202ENST00000538696 HMG20BQ9P0W2 317 aa20.99■□□□□ 0.95
CLN6-202ENST00000538696 JAG2Q9Y219 1238 aa20.99■□□□□ 0.95
CLN6-202ENST00000538696 ZNF541Q9H0D2 1346 aa20.98■□□□□ 0.95
CLN6-202ENST00000538696 MYH7P12883 1935 aa20.98■□□□□ 0.95
CLN6-202ENST00000538696 MAST2Q6P0Q8 1798 aa20.98■□□□□ 0.95
CLN6-202ENST00000538696 OSBPL3Q9H4L5 887 aa20.98■□□□□ 0.95
CLN6-202ENST00000538696 DENND2AQ9ULE3 1009 aa20.98■□□□□ 0.95
CLN6-202ENST00000538696 AOX1Q06278 1338 aa20.97■□□□□ 0.95
CLN6-202ENST00000538696 PDS5AQ29RF7 1337 aaKnown RBP20.97■□□□□ 0.95
CLN6-202ENST00000538696 FAM205AQ6ZU69 1335 aa20.97■□□□□ 0.95
CLN6-202ENST00000538696 FRAT2O75474 233 aaPredicted RBP20.97■□□□□ 0.95
CLN6-202ENST00000538696 CHAF1AQ13111 956 aaPredicted RBP20.97■□□□□ 0.95
CLN6-202ENST00000538696 SPATA5Q8NB90 893 aa20.97■□□□□ 0.95
CLN6-202ENST00000538696 BOLA2Q9H3K6 86 aa20.97■□□□□ 0.95
CLN6-202ENST00000538696 SNRKQ9NRH2 765 aa20.97■□□□□ 0.95
CLN6-202ENST00000538696 RAD17O75943 681 aa20.96■□□□□ 0.95
CLN6-202ENST00000538696 GTF2IP78347 998 aa20.96■□□□□ 0.95
CLN6-202ENST00000538696 FBXW7Q969H0 707 aa20.96■□□□□ 0.95
CLN6-202ENST00000538696 NDUFB9Q9Y6M9 179 aa20.96■□□□□ 0.95
CLN6-202ENST00000538696 ERC2O15083 957 aa20.95■□□□□ 0.94
CLN6-202ENST00000538696 ZAP70P43403 619 aa20.95■□□□□ 0.94
CLN6-202ENST00000538696 CXCL9Q07325 125 aa20.95■□□□□ 0.94
CLN6-202ENST00000538696 UTRNP46939 3433 aa20.94■□□□□ 0.94
CLN6-202ENST00000538696 USP17L3A6NCW0 530 aa20.94■□□□□ 0.94
CLN6-202ENST00000538696 USP17L4A6NCW7 530 aa20.94■□□□□ 0.94
CLN6-202ENST00000538696 PSMD14O00487 310 aa20.94■□□□□ 0.94
CLN6-202ENST00000538696 GLRX3O76003 335 aaKnown RBP20.94■□□□□ 0.94
CLN6-202ENST00000538696 EIF6P56537 245 aaKnown RBP20.94■□□□□ 0.94
CLN6-202ENST00000538696 DACT2Q5SW24 774 aa20.94■□□□□ 0.94
CLN6-202ENST00000538696 STRIP1Q5VSL9 837 aa20.94■□□□□ 0.94
CLN6-202ENST00000538696 TTLL5Q6EMB2 1281 aa20.94■□□□□ 0.94
CLN6-202ENST00000538696 CIAPIN1Q6FI81 312 aa20.94■□□□□ 0.94
CLN6-202ENST00000538696 USP17L1Q7RTZ2 530 aa20.94■□□□□ 0.94
CLN6-202ENST00000538696 HAUS7Q99871 368 aa20.94■□□□□ 0.94
CLN6-202ENST00000538696 MXD3Q9BW11 206 aa20.94■□□□□ 0.94
CLN6-202ENST00000538696 ZC3H4Q9UPT8 1303 aaKnown RBP20.94■□□□□ 0.94
CLN6-202ENST00000538696 ADAMTSL1Q8N6G6 1762 aa20.93■□□□□ 0.94
CLN6-202ENST00000538696 DNAJC2Q99543 621 aaKnown RBP20.93■□□□□ 0.94
CLN6-202ENST00000538696 SALL1Q9NSC2 1324 aa20.93■□□□□ 0.94
CLN6-202ENST00000538696 CYP2E1P05181 493 aaPredicted RBP20.92■□□□□ 0.94
CLN6-202ENST00000538696 CERS5Q8N5B7 392 aa20.92■□□□□ 0.94
CLN6-202ENST00000538696 EDC3Q96F86 508 aaKnown RBP20.92■□□□□ 0.94
CLN6-202ENST00000538696 VIL1P09327 827 aaKnown RBP20.91■□□□□ 0.94
CLN6-202ENST00000538696 FKBP1AP62942 108 aaKnown RBP20.91■□□□□ 0.94
CLN6-202ENST00000538696 MFSD14BQ5SR56 506 aa20.91■□□□□ 0.94
CLN6-202ENST00000538696 WDR66Q8TBY9 1149 aa20.91■□□□□ 0.94
CLN6-202ENST00000538696 ANTXR1Q9H6X2 564 aa20.91■□□□□ 0.94
CLN6-202ENST00000538696 PIH1D3Q9NQM4 214 aaKnown RBP20.91■□□□□ 0.94
CLN6-202ENST00000538696 GOLIM4O00461 696 aa20.9■□□□□ 0.94
CLN6-202ENST00000538696 SEC24BO95487 1268 aa20.9■□□□□ 0.94
CLN6-202ENST00000538696 MAP4K4O95819 1239 aaPredicted RBP20.9■□□□□ 0.94
CLN6-202ENST00000538696 SDSP20132 328 aa20.9■□□□□ 0.94
CLN6-202ENST00000538696 TNIP1Q15025 636 aa20.9■□□□□ 0.94
CLN6-202ENST00000538696 GRIK5Q16478 980 aa20.9■□□□□ 0.94
CLN6-202ENST00000538696 RSBN1LQ6PCB5 846 aaPredicted RBP20.9■□□□□ 0.94
CLN6-202ENST00000538696 TBC1D9Q6ZT07 1266 aa20.9■□□□□ 0.94
CLN6-202ENST00000538696 TBC1D22AQ8WUA7 517 aa20.9■□□□□ 0.94
CLN6-202ENST00000538696 PAG1Q9NWQ8 432 aa20.9■□□□□ 0.94
CLN6-202ENST00000538696 MYH2Q9UKX2 1941 aa20.9■□□□□ 0.94
CLN6-202ENST00000538696 ZBTB12Q9Y330 459 aaPredicted RBP20.89■□□□□ 0.93
CLN6-202ENST00000538696 GJA3Q9Y6H8 435 aa20.89■□□□□ 0.93
CLN6-202ENST00000538696 WDR90Q96KV7 1748 aa20.88■□□□□ 0.93
CLN6-202ENST00000538696 CDC45O75419 566 aa20.88■□□□□ 0.93
CLN6-202ENST00000538696 GPC2Q8N158 579 aa20.88■□□□□ 0.93
CLN6-202ENST00000538696 ABCF2Q9UG63 623 aa20.88■□□□□ 0.93
CLN6-202ENST00000538696 MYO3BQ8WXR4 1341 aa20.88■□□□□ 0.93
CLN6-202ENST00000538696 PRDX5P30044 214 aa20.87■□□□□ 0.93
CLN6-202ENST00000538696 ZGPATQ8N5A5 531 aaKnown RBP20.87■□□□□ 0.93
CLN6-202ENST00000538696 GMLQ99445 158 aa20.87■□□□□ 0.93
CLN6-202ENST00000538696 DDNO94850 711 aaPredicted RBP20.86■□□□□ 0.93
CLN6-202ENST00000538696 GMPSP49915 693 aaPredicted RBP20.86■□□□□ 0.93
CLN6-202ENST00000538696 TTF1Q15361 905 aaPredicted RBP20.86■□□□□ 0.93
CLN6-202ENST00000538696 AGBL3Q8NEM8 1001 aa20.86■□□□□ 0.93
CLN6-202ENST00000538696 SCN4AP35499 1836 aa20.85■□□□□ 0.93
CLN6-202ENST00000538696 ERICH6Q7L0X2 663 aa20.85■□□□□ 0.93
CLN6-202ENST00000538696 GLTPD2A6NH11 291 aa20.84■□□□□ 0.93
CLN6-202ENST00000538696 F8W031 263 aaPredicted RBP20.84■□□□□ 0.93
CLN6-202ENST00000538696 LDHBP07195 334 aaKnown RBP20.84■□□□□ 0.93
CLN6-202ENST00000538696 RPS12P25398 132 aaKnown RBP20.84■□□□□ 0.93
CLN6-202ENST00000538696 SPTY2D1Q68D10 685 aaPredicted RBP20.84■□□□□ 0.93
CLN6-202ENST00000538696 KIAA0825Q8IV33 1275 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms