RNA–Protein interactions for RNA: ENST00000537275.5

HMGA2-207, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,508 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-207ENST00000537275 FRAT2O75474 233 aaPredicted RBP29.58■■■□□ 2.33
HMGA2-207ENST00000537275 JDP2Q8WYK2 163 aa29.58■■■□□ 2.33
HMGA2-207ENST00000537275 DENND2AQ9ULE3 1009 aa29.58■■■□□ 2.33
HMGA2-207ENST00000537275 NIM1KQ8IY84 436 aa29.57■■■□□ 2.32
HMGA2-207ENST00000537275 COL1A1P02452 1464 aaPredicted RBP29.57■■■□□ 2.32
HMGA2-207ENST00000537275 MYH13Q9UKX3 1938 aa29.57■■■□□ 2.32
HMGA2-207ENST00000537275 YDJCA8MPS7 323 aa29.56■■■□□ 2.32
HMGA2-207ENST00000537275 PI16Q6UXB8 463 aa29.56■■■□□ 2.32
HMGA2-207ENST00000537275 SPATA5Q8NB90 893 aa29.56■■■□□ 2.32
HMGA2-207ENST00000537275 HAUS7Q99871 368 aa29.56■■■□□ 2.32
HMGA2-207ENST00000537275 PDS5AQ29RF7 1337 aaKnown RBP29.56■■■□□ 2.32
HMGA2-207ENST00000537275 ZNRF3Q9ULT6 936 aa29.55■■■□□ 2.32
HMGA2-207ENST00000537275 DICER1Q9UPY3 1922 aaKnown RBP29.55■■■□□ 2.32
HMGA2-207ENST00000537275 KCNQ5Q9NR82 932 aa29.55■■■□□ 2.32
HMGA2-207ENST00000537275 SNRKQ9NRH2 765 aa29.55■■■□□ 2.32
HMGA2-207ENST00000537275 FAM205AQ6ZU69 1335 aa29.54■■■□□ 2.32
HMGA2-207ENST00000537275 SCN9AQ15858 1988 aa29.54■■■□□ 2.32
HMGA2-207ENST00000537275 ZAP70P43403 619 aa29.54■■■□□ 2.32
HMGA2-207ENST00000537275 RNF181Q9P0P0 153 aa29.54■■■□□ 2.32
HMGA2-207ENST00000537275 NDUFB9Q9Y6M9 179 aa29.54■■■□□ 2.32
HMGA2-207ENST00000537275 TTC22Q5TAA0 569 aa29.53■■■□□ 2.32
HMGA2-207ENST00000537275 GTF2IP78347 998 aa29.52■■■□□ 2.32
HMGA2-207ENST00000537275 DNAJC2Q99543 621 aaKnown RBP29.52■■■□□ 2.32
HMGA2-207ENST00000537275 CYP2E1P05181 493 aaPredicted RBP29.51■■■□□ 2.32
HMGA2-207ENST00000537275 GSPT1P15170 499 aaKnown RBP29.51■■■□□ 2.32
HMGA2-207ENST00000537275 CHAF1AQ13111 956 aaPredicted RBP29.51■■■□□ 2.32
HMGA2-207ENST00000537275 C9orf131Q5VYM1 1079 aa29.51■■■□□ 2.32
HMGA2-207ENST00000537275 TTLL5Q6EMB2 1281 aa29.51■■■□□ 2.32
HMGA2-207ENST00000537275 FBXW7Q969H0 707 aa29.51■■■□□ 2.32
HMGA2-207ENST00000537275 FZD9O00144 591 aa29.5■■■□□ 2.31
HMGA2-207ENST00000537275 STRIP1Q5VSL9 837 aa29.5■■■□□ 2.31
HMGA2-207ENST00000537275 JAG2Q9Y219 1238 aa29.5■■■□□ 2.31
HMGA2-207ENST00000537275 PSME4Q14997 1843 aa29.5■■■□□ 2.31
HMGA2-207ENST00000537275 USP17L3A6NCW0 530 aa29.5■■■□□ 2.31
HMGA2-207ENST00000537275 USP17L4A6NCW7 530 aa29.5■■■□□ 2.31
HMGA2-207ENST00000537275 USP17L1Q7RTZ2 530 aa29.5■■■□□ 2.31
HMGA2-207ENST00000537275 WDR66Q8TBY9 1149 aa29.5■■■□□ 2.31
HMGA2-207ENST00000537275 EDC3Q96F86 508 aaKnown RBP29.5■■■□□ 2.31
HMGA2-207ENST00000537275 PAG1Q9NWQ8 432 aa29.5■■■□□ 2.31
HMGA2-207ENST00000537275 ZNF646O15015 1829 aaPredicted RBP29.49■■■□□ 2.31
HMGA2-207ENST00000537275 ANTXR1Q9H6X2 564 aa29.49■■■□□ 2.31
HMGA2-207ENST00000537275 SALL1Q9NSC2 1324 aa29.49■■■□□ 2.31
HMGA2-207ENST00000537275 GOLIM4O00461 696 aa29.48■■■□□ 2.31
HMGA2-207ENST00000537275 MAP4K4O95819 1239 aaPredicted RBP29.48■■■□□ 2.31
HMGA2-207ENST00000537275 CXCL9Q07325 125 aa29.48■■■□□ 2.31
HMGA2-207ENST00000537275 RAD17O75943 681 aa29.47■■■□□ 2.31
HMGA2-207ENST00000537275 DACT2Q5SW24 774 aa29.47■■■□□ 2.31
HMGA2-207ENST00000537275 TBC1D22AQ8WUA7 517 aa29.47■■■□□ 2.31
HMGA2-207ENST00000537275 TBC1D9Q6ZT07 1266 aa29.46■■■□□ 2.31
HMGA2-207ENST00000537275 EIF6P56537 245 aaKnown RBP29.45■■■□□ 2.31
HMGA2-207ENST00000537275 FKBP1AP62942 108 aaKnown RBP29.45■■■□□ 2.31
HMGA2-207ENST00000537275 TTF1Q15361 905 aaPredicted RBP29.45■■■□□ 2.31
HMGA2-207ENST00000537275 BMP2KLQ5H9B9 411 aa29.45■■■□□ 2.31
HMGA2-207ENST00000537275 TIAM2Q8IVF5 1701 aa29.45■■■□□ 2.31
HMGA2-207ENST00000537275 VIL1P09327 827 aaKnown RBP29.45■■■□□ 2.3
HMGA2-207ENST00000537275 MFSD14BQ5SR56 506 aa29.45■■■□□ 2.3
HMGA2-207ENST00000537275 CIAPIN1Q6FI81 312 aa29.45■■■□□ 2.3
HMGA2-207ENST00000537275 EVI5LQ96CN4 794 aa29.45■■■□□ 2.3
HMGA2-207ENST00000537275 PIH1D3Q9NQM4 214 aaKnown RBP29.45■■■□□ 2.3
HMGA2-207ENST00000537275 TRIM6-TRIM34B2RNG4 842 aa29.44■■■□□ 2.3
HMGA2-207ENST00000537275 PSMD14O00487 310 aa29.44■■■□□ 2.3
HMGA2-207ENST00000537275 SDSP20132 328 aa29.44■■■□□ 2.3
HMGA2-207ENST00000537275 ZGPATQ8N5A5 531 aaKnown RBP29.44■■■□□ 2.3
HMGA2-207ENST00000537275 CERS5Q8N5B7 392 aa29.44■■■□□ 2.3
HMGA2-207ENST00000537275 ABCF2Q9UG63 623 aa29.44■■■□□ 2.3
HMGA2-207ENST00000537275 CNTROBQ8N137 903 aa29.43■■■□□ 2.3
HMGA2-207ENST00000537275 KBTBD3Q8NAB2 608 aa29.43■■■□□ 2.3
HMGA2-207ENST00000537275 MXD3Q9BW11 206 aa29.43■■■□□ 2.3
HMGA2-207ENST00000537275 TNIP1Q15025 636 aa29.42■■■□□ 2.3
HMGA2-207ENST00000537275 DOCK2Q92608 1830 aa29.42■■■□□ 2.3
HMGA2-207ENST00000537275 RILPL2Q969X0 211 aa29.42■■■□□ 2.3
HMGA2-207ENST00000537275 MYO5AQ9Y4I1 1855 aaKnown RBP29.42■■■□□ 2.3
HMGA2-207ENST00000537275 ZNF541Q9H0D2 1346 aa29.41■■■□□ 2.3
HMGA2-207ENST00000537275 PRDX5P30044 214 aa29.41■■■□□ 2.3
HMGA2-207ENST00000537275 RSBN1LQ6PCB5 846 aaPredicted RBP29.41■■■□□ 2.3
HMGA2-207ENST00000537275 ZC3H4Q9UPT8 1303 aaKnown RBP29.41■■■□□ 2.3
HMGA2-207ENST00000537275 GRIK5Q16478 980 aa29.4■■■□□ 2.3
HMGA2-207ENST00000537275 LRP2BPQ9P2M1 347 aa29.4■■■□□ 2.3
HMGA2-207ENST00000537275 SUGT1Q9Y2Z0 365 aa29.4■■■□□ 2.3
HMGA2-207ENST00000537275 SPTY2D1Q68D10 685 aaPredicted RBP29.4■■■□□ 2.3
HMGA2-207ENST00000537275 ERICH6Q7L0X2 663 aa29.4■■■□□ 2.3
HMGA2-207ENST00000537275 MYO3BQ8WXR4 1341 aa29.39■■■□□ 2.3
HMGA2-207ENST00000537275 GJA3Q9Y6H8 435 aa29.39■■■□□ 2.3
HMGA2-207ENST00000537275 IGSF3O75054 1194 aa29.38■■■□□ 2.29
HMGA2-207ENST00000537275 IDH1O75874 414 aaKnown RBP29.38■■■□□ 2.29
HMGA2-207ENST00000537275 LDHBP07195 334 aaKnown RBP29.38■■■□□ 2.29
HMGA2-207ENST00000537275 GMLQ99445 158 aa29.38■■■□□ 2.29
HMGA2-207ENST00000537275 AK9Q5TCS8 1911 aa29.38■■■□□ 2.29
HMGA2-207ENST00000537275 MAP3K12Q12852 859 aa29.37■■■□□ 2.29
HMGA2-207ENST00000537275 FSD1Q9BTV5 496 aa29.37■■■□□ 2.29
HMGA2-207ENST00000537275 ZBTB12Q9Y330 459 aaPredicted RBP29.37■■■□□ 2.29
HMGA2-207ENST00000537275 AGBL3Q8NEM8 1001 aa29.36■■■□□ 2.29
HMGA2-207ENST00000537275 RAI14Q9P0K7 980 aa29.36■■■□□ 2.29
HMGA2-207ENST00000537275 TICAM2Q86XR7 235 aa29.35■■■□□ 2.29
HMGA2-207ENST00000537275 GPC2Q8N158 579 aa29.35■■■□□ 2.29
HMGA2-207ENST00000537275 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.35■■■□□ 2.29
HMGA2-207ENST00000537275 MECOMQ03112 1051 aa29.35■■■□□ 2.29
HMGA2-207ENST00000537275 ZNF384Q8TF68 577 aa29.35■■■□□ 2.29
HMGA2-207ENST00000537275 NSUN4Q96CB9 384 aaKnown RBP29.35■■■□□ 2.29
HMGA2-207ENST00000537275 RPS12P25398 132 aaKnown RBP29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms