RNA–Protein interactions for RNA: ENST00000534300.5

AMBRA1-212, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 5,067 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-212ENST00000534300 NAA25Q14CX7 972 aa13.76□□□□□ -0.21
AMBRA1-212ENST00000534300 CCDC40Q4G0X9 1142 aa13.76□□□□□ -0.21
AMBRA1-212ENST00000534300 CCDC129Q6ZRS4 1044 aa13.76□□□□□ -0.21
AMBRA1-212ENST00000534300 SELENOOQ9BVL4 669 aa13.76□□□□□ -0.21
AMBRA1-212ENST00000534300 FAM135BQ49AJ0 1406 aa13.76□□□□□ -0.21
AMBRA1-212ENST00000534300 MAP3K5Q99683 1374 aa13.76□□□□□ -0.21
AMBRA1-212ENST00000534300 U2AF2P26368 475 aaKnown RBP eCLIP13.76□□□□□ -0.216e-7■■■■□ 24.6
AMBRA1-212ENST00000534300 PIBF1Q8WXW3 757 aa13.76□□□□□ -0.21
AMBRA1-212ENST00000534300 TCP11L1Q9NUJ3 509 aa13.76□□□□□ -0.21
AMBRA1-212ENST00000534300 ABCF2Q9UG63 623 aa13.76□□□□□ -0.21
AMBRA1-212ENST00000534300 ASXL1Q8IXJ9 1541 aa13.76□□□□□ -0.21
AMBRA1-212ENST00000534300 POLR3DP05423 398 aaPredicted RBP13.76□□□□□ -0.21
AMBRA1-212ENST00000534300 VAV2P52735 878 aa13.76□□□□□ -0.21
AMBRA1-212ENST00000534300 SCLT1Q96NL6 688 aa13.76□□□□□ -0.21
AMBRA1-212ENST00000534300 RNF41Q9H4P4 317 aaPredicted RBP13.76□□□□□ -0.21
AMBRA1-212ENST00000534300 ZEB2O60315 1214 aa13.75□□□□□ -0.21
AMBRA1-212ENST00000534300 UBA7P41226 1012 aa13.75□□□□□ -0.21
AMBRA1-212ENST00000534300 IQCA1Q86XH1 822 aa13.75□□□□□ -0.21
AMBRA1-212ENST00000534300 POTEDQ86YR6 584 aa13.75□□□□□ -0.21
AMBRA1-212ENST00000534300 CRACR2BQ8N4Y2 399 aaPredicted RBP13.75□□□□□ -0.21
AMBRA1-212ENST00000534300 CARD10Q9BWT7 1032 aa13.75□□□□□ -0.21
AMBRA1-212ENST00000534300 SLC39A6Q13433 755 aa13.75□□□□□ -0.21
AMBRA1-212ENST00000534300 CCDC96Q2M329 555 aa13.75□□□□□ -0.21
AMBRA1-212ENST00000534300 CNBD1Q8NA66 436 aa13.75□□□□□ -0.21
AMBRA1-212ENST00000534300 INTS4Q96HW7 963 aaKnown RBP13.75□□□□□ -0.21
AMBRA1-212ENST00000534300 A0A1W2PRG0 241 aa13.75□□□□□ -0.21
AMBRA1-212ENST00000534300 SDSP20132 328 aa13.75□□□□□ -0.21
AMBRA1-212ENST00000534300 SPTY2D1Q68D10 685 aaPredicted RBP13.75□□□□□ -0.21
AMBRA1-212ENST00000534300 SEC63Q9UGP8 760 aaKnown RBP13.75□□□□□ -0.21
AMBRA1-212ENST00000534300 SARNPP82979 210 aaKnown RBP13.75□□□□□ -0.21
AMBRA1-212ENST00000534300 PCDHB15Q9Y5E8 787 aa13.75□□□□□ -0.21
AMBRA1-212ENST00000534300 IL16Q14005 1332 aa13.75□□□□□ -0.21
AMBRA1-212ENST00000534300 RNMTO43148 476 aaKnown RBP13.74□□□□□ -0.21
AMBRA1-212ENST00000534300 NEBLO76041 1014 aa13.74□□□□□ -0.21
AMBRA1-212ENST00000534300 EVCP57679 992 aa13.74□□□□□ -0.21
AMBRA1-212ENST00000534300 KIF5AQ12840 1032 aa13.74□□□□□ -0.21
AMBRA1-212ENST00000534300 DNAJC21Q5F1R6 531 aaKnown RBP13.74□□□□□ -0.21
AMBRA1-212ENST00000534300 ARHGAP45Q92619 1136 aa13.74□□□□□ -0.21
AMBRA1-212ENST00000534300 DIP2BQ9P265 1576 aa13.74□□□□□ -0.21
AMBRA1-212ENST00000534300 IFIT3O14879 490 aaKnown RBP13.74□□□□□ -0.21
AMBRA1-212ENST00000534300 BMP15O95972 392 aa13.74□□□□□ -0.21
AMBRA1-212ENST00000534300 PARP10Q53GL7 1025 aa13.74□□□□□ -0.21
AMBRA1-212ENST00000534300 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.74□□□□□ -0.21
AMBRA1-212ENST00000534300 SEPT12Q8IYM1 358 aa13.74□□□□□ -0.21
AMBRA1-212ENST00000534300 TRIM47Q96LD4 638 aa13.74□□□□□ -0.21
AMBRA1-212ENST00000534300 CTNNA2P26232 953 aa13.74□□□□□ -0.21
AMBRA1-212ENST00000534300 DNM1Q05193 864 aaKnown RBP13.74□□□□□ -0.21
AMBRA1-212ENST00000534300 STIM2Q9P246 746 aa13.74□□□□□ -0.21
AMBRA1-212ENST00000534300 AGLP35573 1532 aa13.74□□□□□ -0.21
AMBRA1-212ENST00000534300 PPP2R3AQ06190 1150 aa13.74□□□□□ -0.21
AMBRA1-212ENST00000534300 CCDC8Q9H0W5 538 aaPredicted RBP13.74□□□□□ -0.21
AMBRA1-212ENST00000534300 ERVV-2B6SEH9 535 aa13.73□□□□□ -0.21
AMBRA1-212ENST00000534300 FBLN1P23142 703 aa13.73□□□□□ -0.21
AMBRA1-212ENST00000534300 LDHAL6AQ6ZMR3 332 aa13.73□□□□□ -0.21
AMBRA1-212ENST00000534300 RBM17Q96I25 401 aaKnown RBP13.73□□□□□ -0.21
AMBRA1-212ENST00000534300 IKBKGQ9Y6K9 419 aa13.73□□□□□ -0.21
AMBRA1-212ENST00000534300 MAP3K4Q9Y6R4 1608 aa13.73□□□□□ -0.21
AMBRA1-212ENST00000534300 H0YIN7 160 aa13.73□□□□□ -0.21
AMBRA1-212ENST00000534300 RIOK3O14730 519 aaKnown RBP13.73□□□□□ -0.21
AMBRA1-212ENST00000534300 NLRP5P59047 1200 aa13.73□□□□□ -0.21
AMBRA1-212ENST00000534300 FLIIQ13045 1269 aa13.73□□□□□ -0.21
AMBRA1-212ENST00000534300 CCDC82Q8N4S0 544 aa13.73□□□□□ -0.21
AMBRA1-212ENST00000534300 CALML4Q96GE6 196 aa13.73□□□□□ -0.21
AMBRA1-212ENST00000534300 ZC3H12CQ9C0D7 883 aaKnown RBP13.73□□□□□ -0.21
AMBRA1-212ENST00000534300 CCDC160A6NGH7 325 aa13.73□□□□□ -0.21
AMBRA1-212ENST00000534300 CCDC172P0C7W6 258 aa13.73□□□□□ -0.21
AMBRA1-212ENST00000534300 USP5P45974 858 aa13.73□□□□□ -0.21
AMBRA1-212ENST00000534300 TUBB2AQ13885 445 aa13.73□□□□□ -0.21
AMBRA1-212ENST00000534300 WDR66Q8TBY9 1149 aa13.73□□□□□ -0.21
AMBRA1-212ENST00000534300 TUBB2BQ9BVA1 445 aa13.73□□□□□ -0.21
AMBRA1-212ENST00000534300 IDEP14735 1019 aa13.73□□□□□ -0.21
AMBRA1-212ENST00000534300 LACTBP83111 547 aaPredicted RBP13.73□□□□□ -0.21
AMBRA1-212ENST00000534300 SEPT6Q14141 434 aa13.73□□□□□ -0.21
AMBRA1-212ENST00000534300 RASAL2Q9UJF2 1139 aa13.73□□□□□ -0.21
AMBRA1-212ENST00000534300 POLR3AO14802 1390 aaPredicted RBP13.72□□□□□ -0.21
AMBRA1-212ENST00000534300 CFAP58Q5T655 872 aa13.72□□□□□ -0.21
AMBRA1-212ENST00000534300 PPFIBP2Q8ND30 876 aa13.72□□□□□ -0.21
AMBRA1-212ENST00000534300 CFAP57Q96MR6 1250 aa13.72□□□□□ -0.21
AMBRA1-212ENST00000534300 SMC6Q96SB8 1091 aa13.72□□□□□ -0.21
AMBRA1-212ENST00000534300 LRRC27Q9C0I9 530 aa13.72□□□□□ -0.21
AMBRA1-212ENST00000534300 UBA5Q9GZZ9 404 aa13.72□□□□□ -0.21
AMBRA1-212ENST00000534300 MAP3K2Q9Y2U5 619 aa13.72□□□□□ -0.21
AMBRA1-212ENST00000534300 SOS1Q07889 1333 aaPredicted RBP13.72□□□□□ -0.21
AMBRA1-212ENST00000534300 KIAA0232Q92628 1395 aa13.72□□□□□ -0.21
AMBRA1-212ENST00000534300 INPP5BP32019 993 aa13.72□□□□□ -0.21
AMBRA1-212ENST00000534300 ESYT1Q9BSJ8 1104 aa13.72□□□□□ -0.21
AMBRA1-212ENST00000534300 RBSNQ9H1K0 784 aa13.72□□□□□ -0.21
AMBRA1-212ENST00000534300 SAMD15Q9P1V8 674 aa13.72□□□□□ -0.21
AMBRA1-212ENST00000534300 PRPHP41219 470 aa13.72□□□□□ -0.21
AMBRA1-212ENST00000534300 MTHFSDQ2M296 383 aaKnown RBP13.72□□□□□ -0.21
AMBRA1-212ENST00000534300 AFAP1L1Q8TED9 768 aa13.72□□□□□ -0.21
AMBRA1-212ENST00000534300 TESK2Q96S53 571 aa13.72□□□□□ -0.21
AMBRA1-212ENST00000534300 ANKARQ7Z5J8 1434 aa13.72□□□□□ -0.21
AMBRA1-212ENST00000534300 MINDY4BA8MYZ0 360 aa13.71□□□□□ -0.21
AMBRA1-212ENST00000534300 F6X3S4 739 aa13.71□□□□□ -0.21
AMBRA1-212ENST00000534300 MAP3K12Q12852 859 aa13.71□□□□□ -0.21
AMBRA1-212ENST00000534300 TCERG1LQ5VWI1 586 aa13.71□□□□□ -0.21
AMBRA1-212ENST00000534300 CCDC50Q8IVM0 306 aa13.71□□□□□ -0.21
AMBRA1-212ENST00000534300 NECAB1Q8N987 351 aa13.71□□□□□ -0.21
AMBRA1-212ENST00000534300 PPP1R14CQ8TAE6 165 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms