RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 WDR78Q5VTH9 848 aa20.05■□□□□ 0.8
PHRF1-205ENST00000533464 KBTBD3Q8NAB2 608 aa20.05■□□□□ 0.8
PHRF1-205ENST00000533464 CALML3P27482 149 aa20.05■□□□□ 0.8
PHRF1-205ENST00000533464 B4E1Z4 1266 aa20.05■□□□□ 0.8
PHRF1-205ENST00000533464 TRMT2AQ8IZ69 625 aaKnown RBP20.05■□□□□ 0.8
PHRF1-205ENST00000533464 ZC3H12CQ9C0D7 883 aaKnown RBP20.05■□□□□ 0.8
PHRF1-205ENST00000533464 SPAG1Q07617 926 aa20.04■□□□□ 0.8
PHRF1-205ENST00000533464 CETN1Q12798 172 aa20.04■□□□□ 0.8
PHRF1-205ENST00000533464 CTAGE1Q96RT6 745 aa20.04■□□□□ 0.8
PHRF1-205ENST00000533464 PPP4R3AQ6IN85 833 aa20.04■□□□□ 0.8
PHRF1-205ENST00000533464 SAMM50Q9Y512 469 aa20.04■□□□□ 0.8
PHRF1-205ENST00000533464 DTNBO60941 627 aa20.04■□□□□ 0.8
PHRF1-205ENST00000533464 CETN2P41208 172 aa20.04■□□□□ 0.8
PHRF1-205ENST00000533464 APPBP2Q92624 585 aa20.04■□□□□ 0.8
PHRF1-205ENST00000533464 AKR1B10O60218 316 aa20.04■□□□□ 0.8
PHRF1-205ENST00000533464 DNAJC10Q8IXB1 793 aa20.04■□□□□ 0.8
PHRF1-205ENST00000533464 ERVK-7P63135 1459 aa20.03■□□□□ 0.8
PHRF1-205ENST00000533464 KIF24Q5T7B8 1368 aa20.03■□□□□ 0.8
PHRF1-205ENST00000533464 GIGYF1O75420 1035 aaPredicted RBP20.03■□□□□ 0.8
PHRF1-205ENST00000533464 GSPT1P15170 499 aaKnown RBP20.03■□□□□ 0.8
PHRF1-205ENST00000533464 ALS2CR12Q96Q35 445 aa20.03■□□□□ 0.8
PHRF1-205ENST00000533464 ANKRD2Q9GZV1 360 aa20.03■□□□□ 0.8
PHRF1-205ENST00000533464 NCOA5Q9HCD5 579 aaKnown RBP20.03■□□□□ 0.8
PHRF1-205ENST00000533464 A0A1B0GVL5 298 aa20.03■□□□□ 0.8
PHRF1-205ENST00000533464 DYNC1I1O14576 645 aa20.03■□□□□ 0.8
PHRF1-205ENST00000533464 PSMA7O14818 248 aa20.03■□□□□ 0.8
PHRF1-205ENST00000533464 MCM3P25205 808 aa20.03■□□□□ 0.8
PHRF1-205ENST00000533464 PUM3Q15397 648 aaKnown RBP20.03■□□□□ 0.8
PHRF1-205ENST00000533464 LDHBP07195 334 aaKnown RBP20.03■□□□□ 0.8
PHRF1-205ENST00000533464 LIG1P18858 919 aa20.03■□□□□ 0.8
PHRF1-205ENST00000533464 KRT2P35908 639 aa20.03■□□□□ 0.8
PHRF1-205ENST00000533464 GPAA1O43292 621 aa20.02■□□□□ 0.8
PHRF1-205ENST00000533464 ASIC1P78348 528 aa20.02■□□□□ 0.8
PHRF1-205ENST00000533464 PDE8AO60658 829 aa20.02■□□□□ 0.8
PHRF1-205ENST00000533464 SSH3Q8TE77 659 aa20.02■□□□□ 0.8
PHRF1-205ENST00000533464 USP8P40818 1118 aa20.02■□□□□ 0.8
PHRF1-205ENST00000533464 PARP10Q53GL7 1025 aa20.02■□□□□ 0.8
PHRF1-205ENST00000533464 C6orf50Q9HD87 102 aa20.02■□□□□ 0.8
PHRF1-205ENST00000533464 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.02■□□□□ 0.81e-7■■■■□ 21.8
PHRF1-205ENST00000533464 TBCAO75347 108 aaKnown RBP20.02■□□□□ 0.79
PHRF1-205ENST00000533464 HSPA4P34932 840 aa20.02■□□□□ 0.79
PHRF1-205ENST00000533464 SYCP3Q8IZU3 236 aa20.02■□□□□ 0.79
PHRF1-205ENST00000533464 DNAI1Q9UI46 699 aa20.02■□□□□ 0.79
PHRF1-205ENST00000533464 KDM5AP29375 1690 aaKnown RBP20.02■□□□□ 0.79
PHRF1-205ENST00000533464 ABCA8O94911 1581 aa20.01■□□□□ 0.79
PHRF1-205ENST00000533464 STXBP4Q6ZWJ1 553 aa20.01■□□□□ 0.79
PHRF1-205ENST00000533464 ERMNQ8TAM6 284 aa20.01■□□□□ 0.79
PHRF1-205ENST00000533464 DCAF8L1A6NGE4 600 aa20.01■□□□□ 0.79
PHRF1-205ENST00000533464 GNPATO15228 680 aa20.01■□□□□ 0.79
PHRF1-205ENST00000533464 MYO1BO43795 1136 aa20.01■□□□□ 0.79
PHRF1-205ENST00000533464 CHMP4BP1P59074 171 aa20.01■□□□□ 0.79
PHRF1-205ENST00000533464 ATL3Q6DD88 541 aa20.01■□□□□ 0.79
PHRF1-205ENST00000533464 SCLT1Q96NL6 688 aa20.01■□□□□ 0.79
PHRF1-205ENST00000533464 POLR3GO15318 223 aaPredicted RBP20.01■□□□□ 0.79
PHRF1-205ENST00000533464 NEURL1BA8MQ27 555 aa20.01■□□□□ 0.79
PHRF1-205ENST00000533464 PLCG2P16885 1265 aa20.01■□□□□ 0.79
PHRF1-205ENST00000533464 NOP2P46087 812 aaKnown RBP20.01■□□□□ 0.79
PHRF1-205ENST00000533464 JADE2Q9NQC1 790 aa20.01■□□□□ 0.79
PHRF1-205ENST00000533464 PRDM10Q9NQV6 1147 aa20.01■□□□□ 0.79
PHRF1-205ENST00000533464 TMCO5BA8MYB1 307 aa20■□□□□ 0.79
PHRF1-205ENST00000533464 RBSNQ9H1K0 784 aa20■□□□□ 0.79
PHRF1-205ENST00000533464 ARMT1Q9H993 441 aa20■□□□□ 0.79
PHRF1-205ENST00000533464 DESP17661 470 aa20■□□□□ 0.79
PHRF1-205ENST00000533464 PTGS1P23219 599 aa20■□□□□ 0.79
PHRF1-205ENST00000533464 STX17P56962 302 aa20■□□□□ 0.79
PHRF1-205ENST00000533464 MCM7P33993 719 aa20■□□□□ 0.79
PHRF1-205ENST00000533464 DENND2AQ9ULE3 1009 aa20■□□□□ 0.79
PHRF1-205ENST00000533464 METP08581 1390 aa20■□□□□ 0.79
PHRF1-205ENST00000533464 ANKRD62A6NC57 917 aa20■□□□□ 0.79
PHRF1-205ENST00000533464 HS1BP3Q53T59 392 aa20■□□□□ 0.79
PHRF1-205ENST00000533464 KRI1Q8N9T8 703 aaKnown RBP20■□□□□ 0.79
PHRF1-205ENST00000533464 PPP4R3BQ5MIZ7 849 aa19.99■□□□□ 0.79
PHRF1-205ENST00000533464 EDC3Q96F86 508 aaKnown RBP19.99■□□□□ 0.79
PHRF1-205ENST00000533464 FAM160A1Q05DH4 1040 aa19.99■□□□□ 0.79
PHRF1-205ENST00000533464 ANGEL1Q9UNK9 670 aaKnown RBP19.99■□□□□ 0.79
PHRF1-205ENST00000533464 TMEM87BQ96K49 555 aa19.99■□□□□ 0.79
PHRF1-205ENST00000533464 LLPHQ9BRT6 129 aaKnown RBP19.99■□□□□ 0.79
PHRF1-205ENST00000533464 IFNKQ9P0W0 207 aa19.99■□□□□ 0.79
PHRF1-205ENST00000533464 SAMD9LQ8IVG5 1584 aa19.99■□□□□ 0.79
PHRF1-205ENST00000533464 RRP36Q96EU6 259 aaKnown RBP19.99■□□□□ 0.79
PHRF1-205ENST00000533464 ZNF521Q96K83 1311 aa19.98■□□□□ 0.79
PHRF1-205ENST00000533464 TAF5LO75529 589 aa19.98■□□□□ 0.79
PHRF1-205ENST00000533464 IBSPP21815 317 aaPredicted RBP19.98■□□□□ 0.79
PHRF1-205ENST00000533464 TTLL12Q14166 644 aaPredicted RBP19.98■□□□□ 0.79
PHRF1-205ENST00000533464 OGFOD1Q8N543 542 aa19.98■□□□□ 0.79
PHRF1-205ENST00000533464 SPAG5Q96R06 1193 aa19.98■□□□□ 0.79
PHRF1-205ENST00000533464 KDM5CP41229 1560 aa19.98■□□□□ 0.79
PHRF1-205ENST00000533464 TNNI2P48788 182 aa19.98■□□□□ 0.79
PHRF1-205ENST00000533464 OTUD7BQ6GQQ9 843 aa19.98■□□□□ 0.79
PHRF1-205ENST00000533464 UGGT1Q9NYU2 1555 aa19.97■□□□□ 0.79
PHRF1-205ENST00000533464 POTEB2H3BUK9 544 aa19.97■□□□□ 0.79
PHRF1-205ENST00000533464 RIMBP2O15034 1052 aa19.97■□□□□ 0.79
PHRF1-205ENST00000533464 CDCA7Q9BWT1 371 aaPredicted RBP19.97■□□□□ 0.79
PHRF1-205ENST00000533464 TFCP2L1Q9NZI6 479 aa19.97■□□□□ 0.79
PHRF1-205ENST00000533464 MACROD2A1Z1Q3 448 aa19.97■□□□□ 0.79
PHRF1-205ENST00000533464 ATP5JP18859 108 aa19.97■□□□□ 0.79
PHRF1-205ENST00000533464 HLTFQ14527 1009 aaKnown RBP eCLIP19.97■□□□□ 0.79
PHRF1-205ENST00000533464 EHBP1Q8NDI1 1231 aa19.97■□□□□ 0.79
PHRF1-205ENST00000533464 CYLC1P35663 651 aaPredicted RBP19.96■□□□□ 0.79
PHRF1-205ENST00000533464 TRAF1Q13077 416 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms