RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 TMEM106CQ9BVX2 250 aa15.96■□□□□ 0.15
CAPN1-223ENST00000533079 PLA2G12BQ9BX93 195 aa15.96■□□□□ 0.15
CAPN1-223ENST00000533079 KCNJ4P48050 445 aa15.95■□□□□ 0.14
CAPN1-223ENST00000533079 C15orf52Q6ZUT6 534 aaKnown RBP15.95■□□□□ 0.14
CAPN1-223ENST00000533079 NBPF11Q86T75 865 aa15.95■□□□□ 0.14
CAPN1-223ENST00000533079 ZNF333Q96JL9 665 aa15.95■□□□□ 0.14
CAPN1-223ENST00000533079 MPHOSPH8Q99549 860 aa15.95■□□□□ 0.14
CAPN1-223ENST00000533079 CD209Q9NNX6 404 aa15.95■□□□□ 0.14
CAPN1-223ENST00000533079 ARAP2Q8WZ64 1704 aa15.94■□□□□ 0.14
CAPN1-223ENST00000533079 PI4KAP2A4QPH2 592 aa15.94■□□□□ 0.14
CAPN1-223ENST00000533079 SPDYE2BA6NHP3 402 aa15.94■□□□□ 0.14
CAPN1-223ENST00000533079 NEURL1BA8MQ27 555 aa15.94■□□□□ 0.14
CAPN1-223ENST00000533079 SPDYE6P0CI01 402 aa15.94■□□□□ 0.14
CAPN1-223ENST00000533079 EN2P19622 333 aaPredicted RBP15.94■□□□□ 0.14
CAPN1-223ENST00000533079 ITGA6P23229 1130 aa15.94■□□□□ 0.14
CAPN1-223ENST00000533079 TNFAIP1Q13829 316 aa15.94■□□□□ 0.14
CAPN1-223ENST00000533079 PI4KAP1Q8N8J0 262 aa15.94■□□□□ 0.14
CAPN1-223ENST00000533079 FZD1Q9UP38 647 aa15.94■□□□□ 0.14
CAPN1-223ENST00000533079 ADAMTS8Q9UP79 889 aa15.94■□□□□ 0.14
CAPN1-223ENST00000533079 ELL2O00472 640 aaPredicted RBP15.93■□□□□ 0.14
CAPN1-223ENST00000533079 KLRK1P26718 216 aa15.93■□□□□ 0.14
CAPN1-223ENST00000533079 SLC9C1Q4G0N8 1177 aa15.93■□□□□ 0.14
CAPN1-223ENST00000533079 UBE3BQ7Z3V4 1068 aa15.93■□□□□ 0.14
CAPN1-223ENST00000533079 IRS2Q9Y4H2 1338 aa15.93■□□□□ 0.14
CAPN1-223ENST00000533079 H7C1W4 665 aa15.92■□□□□ 0.14
CAPN1-223ENST00000533079 IL1R1P14778 569 aa15.92■□□□□ 0.14
CAPN1-223ENST00000533079 CHRNDQ07001 517 aa15.92■□□□□ 0.14
CAPN1-223ENST00000533079 CWF19L2Q2TBE0 894 aaKnown RBP15.92■□□□□ 0.14
CAPN1-223ENST00000533079 ZNF804AQ7Z570 1209 aa15.92■□□□□ 0.14
CAPN1-223ENST00000533079 CERS5Q8N5B7 392 aa15.92■□□□□ 0.14
CAPN1-223ENST00000533079 C8orf58Q8NAV2 365 aa15.92■□□□□ 0.14
CAPN1-223ENST00000533079 STK31Q9BXU1 1019 aa15.92■□□□□ 0.14
CAPN1-223ENST00000533079 GJA5P36382 358 aa15.91■□□□□ 0.14
CAPN1-223ENST00000533079 CFAP100Q494V2 611 aa15.91■□□□□ 0.14
CAPN1-223ENST00000533079 OPTNQ96CV9 577 aa15.91■□□□□ 0.14
CAPN1-223ENST00000533079 PTPN18Q99952 460 aa15.91■□□□□ 0.14
CAPN1-223ENST00000533079 MYH16Q9H6N6 1097 aa15.91■□□□□ 0.14
CAPN1-223ENST00000533079 VEZTQ9HBM0 779 aa15.91■□□□□ 0.14
CAPN1-223ENST00000533079 CLRN2A0PK11 232 aa15.9■□□□□ 0.14
CAPN1-223ENST00000533079 USP2O75604 605 aaPredicted RBP15.9■□□□□ 0.14
CAPN1-223ENST00000533079 WDHD1O75717 1129 aaPredicted RBP15.9■□□□□ 0.14
CAPN1-223ENST00000533079 CSF1RP07333 972 aa15.9■□□□□ 0.14
CAPN1-223ENST00000533079 NBPF12Q5TAG4 269 aaPredicted RBP15.9■□□□□ 0.14
CAPN1-223ENST00000533079 ZFYVE28Q9HCC9 887 aa15.9■□□□□ 0.14
CAPN1-223ENST00000533079 COLQQ9Y215 455 aaPredicted RBP15.9■□□□□ 0.14
CAPN1-223ENST00000533079 ANKRD18BA2A2Z9 1011 aa15.89■□□□□ 0.13
CAPN1-223ENST00000533079 GTF2A2P52657 109 aa15.89■□□□□ 0.13
CAPN1-223ENST00000533079 GCKRQ14397 625 aa15.89■□□□□ 0.13
CAPN1-223ENST00000533079 RASA3Q14644 834 aa15.89■□□□□ 0.13
CAPN1-223ENST00000533079 MS4A4AQ96JQ5 239 aa15.89■□□□□ 0.13
CAPN1-223ENST00000533079 ZCCHC17Q9NP64 241 aaKnown RBP15.89■□□□□ 0.13
CAPN1-223ENST00000533079 GNRH1P01148 92 aa15.88■□□□□ 0.13
CAPN1-223ENST00000533079 TAF1CQ15572 869 aaPredicted RBP15.88■□□□□ 0.13
CAPN1-223ENST00000533079 SLC4A8Q2Y0W8 1093 aa15.88■□□□□ 0.13
CAPN1-223ENST00000533079 SPDYE2Q495Y8 402 aa15.88■□□□□ 0.13
CAPN1-223ENST00000533079 PRMT6Q96LA8 375 aaPredicted RBP15.88■□□□□ 0.13
CAPN1-223ENST00000533079 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.88■□□□□ 0.13
CAPN1-223ENST00000533079 SERPINA10Q9UK55 444 aa15.88■□□□□ 0.13
CAPN1-223ENST00000533079 PTCH2Q9Y6C5 1203 aa15.88■□□□□ 0.13
CAPN1-223ENST00000533079 F8W031 263 aaPredicted RBP15.87■□□□□ 0.13
CAPN1-223ENST00000533079 RBM5P52756 815 aaKnown RBP eCLIP15.87■□□□□ 0.13
CAPN1-223ENST00000533079 CASP7P55210 303 aa15.87■□□□□ 0.13
CAPN1-223ENST00000533079 PRMT2P55345 433 aa15.87■□□□□ 0.13
CAPN1-223ENST00000533079 ELP3Q9H9T3 547 aa15.87■□□□□ 0.13
CAPN1-223ENST00000533079 PCDHAC2Q9Y5I4 1007 aa15.87■□□□□ 0.13
CAPN1-223ENST00000533079 CCL15-CCL14A0A0B4J2E2 113 aa15.86■□□□□ 0.13
CAPN1-223ENST00000533079 APAF1O14727 1248 aa15.86■□□□□ 0.13
CAPN1-223ENST00000533079 CAP1Q01518 475 aa15.86■□□□□ 0.13
CAPN1-223ENST00000533079 KIF22Q14807 665 aa15.86■□□□□ 0.13
CAPN1-223ENST00000533079 CCL15Q16663 113 aa15.86■□□□□ 0.13
CAPN1-223ENST00000533079 BRI3BPQ8WY22 251 aa15.86■□□□□ 0.13
CAPN1-223ENST00000533079 CSADQ9Y600 493 aa15.86■□□□□ 0.13
CAPN1-223ENST00000533079 SZT2Q5T011 3432 aa15.86■□□□□ 0.13
CAPN1-223ENST00000533079 TNNI2P48788 182 aa15.85■□□□□ 0.13
CAPN1-223ENST00000533079 IFIT5Q13325 482 aaKnown RBP15.85■□□□□ 0.13
CAPN1-223ENST00000533079 VGLL4Q14135 290 aa15.85■□□□□ 0.13
CAPN1-223ENST00000533079 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.85■□□□□ 0.13
CAPN1-223ENST00000533079 TSPYL6Q8N831 410 aa15.85■□□□□ 0.13
CAPN1-223ENST00000533079 LINS1Q8NG48 757 aa15.85■□□□□ 0.13
CAPN1-223ENST00000533079 OTUD5Q96G74 571 aa15.85■□□□□ 0.13
CAPN1-223ENST00000533079 FAM205AQ6ZU69 1335 aa15.85■□□□□ 0.13
CAPN1-223ENST00000533079 TAF5LO75529 589 aa15.84■□□□□ 0.13
CAPN1-223ENST00000533079 LACTBP83111 547 aaPredicted RBP15.84■□□□□ 0.13
CAPN1-223ENST00000533079 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.84■□□□□ 0.13
CAPN1-223ENST00000533079 TEPSINQ96N21 525 aa15.84■□□□□ 0.13
CAPN1-223ENST00000533079 ZNF70Q9UC06 446 aaPredicted RBP15.84■□□□□ 0.13
CAPN1-223ENST00000533079 SPDYE5A6NIY4 337 aa15.83■□□□□ 0.12
CAPN1-223ENST00000533079 H0YGN5 161 aa15.83■□□□□ 0.12
CAPN1-223ENST00000533079 TLR2O60603 784 aa15.83■□□□□ 0.12
CAPN1-223ENST00000533079 MAP3K9P80192 1104 aa15.83■□□□□ 0.12
CAPN1-223ENST00000533079 FLIIQ13045 1269 aa15.83■□□□□ 0.12
CAPN1-223ENST00000533079 FAM43AQ8N2R8 423 aa15.83■□□□□ 0.12
CAPN1-223ENST00000533079 DNAAF4Q8WXU2 420 aa15.83■□□□□ 0.12
CAPN1-223ENST00000533079 AOX1Q06278 1338 aa15.83■□□□□ 0.12
CAPN1-223ENST00000533079 SLC4A2P04920 1241 aa15.82■□□□□ 0.12
CAPN1-223ENST00000533079 CETPP11597 493 aa15.82■□□□□ 0.12
CAPN1-223ENST00000533079 TWISTNBQ3B726 338 aaPredicted RBP15.82■□□□□ 0.12
CAPN1-223ENST00000533079 MFSD14BQ5SR56 506 aa15.82■□□□□ 0.12
CAPN1-223ENST00000533079 DIEXFQ68CQ4 756 aaKnown RBP15.82■□□□□ 0.12
CAPN1-223ENST00000533079 NKX2-3Q8TAU0 364 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms