RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 GYG1P46976 350 aa23.83■■□□□ 1.41
SSH3-209ENST00000532600 RFX5P48382 616 aaPredicted RBP23.83■■□□□ 1.41
SSH3-209ENST00000532600 VGLL2Q8N8G2 317 aa23.83■■□□□ 1.41
SSH3-209ENST00000532600 FAM84BQ96KN1 310 aaPredicted RBP23.83■■□□□ 1.41
SSH3-209ENST00000532600 TSKSQ9UJT2 592 aa23.83■■□□□ 1.41
SSH3-209ENST00000532600 PAPPA2Q9BXP8 1791 aa23.83■■□□□ 1.4
SSH3-209ENST00000532600 AOX1Q06278 1338 aa23.83■■□□□ 1.4
SSH3-209ENST00000532600 MMP14P50281 582 aa23.82■■□□□ 1.4
SSH3-209ENST00000532600 RARSP54136 660 aaKnown RBP23.82■■□□□ 1.4
SSH3-209ENST00000532600 MOB2Q70IA6 237 aa23.82■■□□□ 1.4
SSH3-209ENST00000532600 TDRD7Q8NHU6 1098 aaKnown RBP23.82■■□□□ 1.4
SSH3-209ENST00000532600 MROH5Q6ZUA9 1318 aa23.82■■□□□ 1.4
SSH3-209ENST00000532600 FKBP1AP62942 108 aaKnown RBP23.81■■□□□ 1.4
SSH3-209ENST00000532600 FAM205AQ6ZU69 1335 aa23.81■■□□□ 1.4
SSH3-209ENST00000532600 NOGQ13253 232 aa23.8■■□□□ 1.4
SSH3-209ENST00000532600 HDAC9Q9UKV0 1011 aa23.8■■□□□ 1.4
SSH3-209ENST00000532600 F8W031 263 aaPredicted RBP23.79■■□□□ 1.4
SSH3-209ENST00000532600 HIBADHP31937 336 aaKnown RBP23.79■■□□□ 1.4
SSH3-209ENST00000532600 ZNF157P51786 506 aaPredicted RBP23.79■■□□□ 1.4
SSH3-209ENST00000532600 MTMR14Q8NCE2 650 aa23.79■■□□□ 1.4
SSH3-209ENST00000532600 ECM29Q5VYK3 1845 aa23.79■■□□□ 1.4
SSH3-209ENST00000532600 ARAP2Q8WZ64 1704 aa23.79■■□□□ 1.4
SSH3-209ENST00000532600 CAPN15O75808 1086 aa23.78■■□□□ 1.4
SSH3-209ENST00000532600 SLC10A3P09131 477 aa23.78■■□□□ 1.4
SSH3-209ENST00000532600 FBXO33Q7Z6M2 555 aa23.78■■□□□ 1.4
SSH3-209ENST00000532600 PDE8BO95263 885 aa23.77■■□□□ 1.4
SSH3-209ENST00000532600 FKBP1BP68106 108 aa23.77■■□□□ 1.4
SSH3-209ENST00000532600 METTL24Q5JXM2 366 aa23.77■■□□□ 1.4
SSH3-209ENST00000532600 RASAL3Q86YV0 1011 aa23.77■■□□□ 1.4
SSH3-209ENST00000532600 CCDC102AQ96A19 550 aa23.77■■□□□ 1.4
SSH3-209ENST00000532600 BEGAINQ9BUH8 593 aa23.77■■□□□ 1.4
SSH3-209ENST00000532600 UBE2Q2LH0YL09 131 aa23.76■■□□□ 1.39
SSH3-209ENST00000532600 KIF23Q02241 960 aaPredicted RBP23.76■■□□□ 1.39
SSH3-209ENST00000532600 PTPN12Q05209 780 aaKnown RBP23.76■■□□□ 1.39
SSH3-209ENST00000532600 DLGAP5Q15398 846 aa23.76■■□□□ 1.39
SSH3-209ENST00000532600 CFAP100Q494V2 611 aa23.76■■□□□ 1.39
SSH3-209ENST00000532600 PRMT6Q96LA8 375 aaPredicted RBP23.76■■□□□ 1.39
SSH3-209ENST00000532600 API5Q9BZZ5 524 aaKnown RBP23.76■■□□□ 1.39
SSH3-209ENST00000532600 ZBED9Q6R2W3 1325 aa23.76■■□□□ 1.39
SSH3-209ENST00000532600 SPDYE2BA6NHP3 402 aa23.75■■□□□ 1.39
SSH3-209ENST00000532600 SPDYE6P0CI01 402 aa23.75■■□□□ 1.39
SSH3-209ENST00000532600 FGFR2P21802 821 aa23.75■■□□□ 1.39
SSH3-209ENST00000532600 GRIK5Q16478 980 aa23.75■■□□□ 1.39
SSH3-209ENST00000532600 SSC5DA1L4H1 1573 aa23.74■■□□□ 1.39
SSH3-209ENST00000532600 MFSD14BQ5SR56 506 aa23.74■■□□□ 1.39
SSH3-209ENST00000532600 ATG9AQ7Z3C6 839 aa23.74■■□□□ 1.39
SSH3-209ENST00000532600 APOBEC3FQ8IUX4 373 aaKnown RBP23.74■■□□□ 1.39
SSH3-209ENST00000532600 IQSEC3Q9UPP2 1182 aaPredicted RBP23.74■■□□□ 1.39
SSH3-209ENST00000532600 TNNQ9UQP3 1299 aa23.74■■□□□ 1.39
SSH3-209ENST00000532600 EYA2O00167 538 aa23.73■■□□□ 1.39
SSH3-209ENST00000532600 UBTFL1P0CB47 393 aaPredicted RBP23.73■■□□□ 1.39
SSH3-209ENST00000532600 MEIS3Q99687 375 aa23.73■■□□□ 1.39
SSH3-209ENST00000532600 CLRN2A0PK11 232 aa23.72■■□□□ 1.39
SSH3-209ENST00000532600 CA12O43570 354 aa23.72■■□□□ 1.39
SSH3-209ENST00000532600 BCAMP50895 628 aa23.72■■□□□ 1.39
SSH3-209ENST00000532600 ARHGAP45Q92619 1136 aa23.72■■□□□ 1.39
SSH3-209ENST00000532600 CSRNP1Q96S65 589 aa23.72■■□□□ 1.39
SSH3-209ENST00000532600 DEFB129Q9H1M3 183 aa23.72■■□□□ 1.39
SSH3-209ENST00000532600 FZD1Q9UP38 647 aa23.72■■□□□ 1.39
SSH3-209ENST00000532600 LRRFIP2Q9Y608 721 aaKnown RBP23.72■■□□□ 1.39
SSH3-209ENST00000532600 COL1A1P02452 1464 aaPredicted RBP23.71■■□□□ 1.39
SSH3-209ENST00000532600 BCAR3O75815 825 aa23.71■■□□□ 1.39
SSH3-209ENST00000532600 INTS3Q68E01 1043 aaKnown RBP23.7■■□□□ 1.38
SSH3-209ENST00000532600 TTF2Q9UNY4 1162 aaKnown RBP23.7■■□□□ 1.38
SSH3-209ENST00000532600 CASP8AP2Q9UKL3 1982 aa23.7■■□□□ 1.38
SSH3-209ENST00000532600 KIF16BQ96L93 1317 aa23.69■■□□□ 1.38
SSH3-209ENST00000532600 PRKG1Q13976 671 aa23.69■■□□□ 1.38
SSH3-209ENST00000532600 PUM3Q15397 648 aaKnown RBP23.69■■□□□ 1.38
SSH3-209ENST00000532600 TRIM27P14373 513 aa23.68■■□□□ 1.38
SSH3-209ENST00000532600 CHAF1AQ13111 956 aaPredicted RBP23.68■■□□□ 1.38
SSH3-209ENST00000532600 SIL1Q9H173 461 aa23.68■■□□□ 1.38
SSH3-209ENST00000532600 RNF186Q9NXI6 227 aa23.68■■□□□ 1.38
SSH3-209ENST00000532600 SERPINA10Q9UK55 444 aa23.68■■□□□ 1.38
SSH3-209ENST00000532600 PA2G4Q9UQ80 394 aaKnown RBP23.68■■□□□ 1.38
SSH3-209ENST00000532600 NF2P35240 595 aa23.67■■□□□ 1.38
SSH3-209ENST00000532600 TTLL12Q14166 644 aaPredicted RBP23.67■■□□□ 1.38
SSH3-209ENST00000532600 CAVIN4Q5BKX8 364 aa23.67■■□□□ 1.38
SSH3-209ENST00000532600 LDLRAD1Q5T700 205 aa23.67■■□□□ 1.38
SSH3-209ENST00000532600 VPS37DQ86XT2 251 aa23.67■■□□□ 1.38
SSH3-209ENST00000532600 AKAP11Q9UKA4 1901 aa23.67■■□□□ 1.38
SSH3-209ENST00000532600 CIAO1O76071 339 aa23.66■■□□□ 1.38
SSH3-209ENST00000532600 RBM5P52756 815 aaKnown RBP eCLIP23.66■■□□□ 1.38
SSH3-209ENST00000532600 SPDYE2Q495Y8 402 aa23.66■■□□□ 1.38
SSH3-209ENST00000532600 VEZTQ9HBM0 779 aa23.66■■□□□ 1.38
SSH3-209ENST00000532600 SAGE1Q9NXZ1 904 aa23.66■■□□□ 1.38
SSH3-209ENST00000532600 ZNF70Q9UC06 446 aaPredicted RBP23.66■■□□□ 1.38
SSH3-209ENST00000532600 CRKP46108 304 aa23.65■■□□□ 1.38
SSH3-209ENST00000532600 DZIP1LQ8IYY4 767 aaKnown RBP23.65■■□□□ 1.38
SSH3-209ENST00000532600 LPIN2Q92539 896 aa23.65■■□□□ 1.38
SSH3-209ENST00000532600 YTHDC1Q96MU7 727 aaKnown RBP23.65■■□□□ 1.38
SSH3-209ENST00000532600 TDRD3Q9H7E2 651 aaKnown RBP23.65■■□□□ 1.38
SSH3-209ENST00000532600 ANGEL1Q9UNK9 670 aaKnown RBP23.65■■□□□ 1.38
SSH3-209ENST00000532600 PPP2R3BQ9Y5P8 575 aa23.65■■□□□ 1.38
SSH3-209ENST00000532600 MYO1BO43795 1136 aa23.64■■□□□ 1.37
SSH3-209ENST00000532600 TRPA1O75762 1119 aa23.64■■□□□ 1.37
SSH3-209ENST00000532600 IFIT1P09914 478 aaKnown RBP23.64■■□□□ 1.37
SSH3-209ENST00000532600 RASA3Q14644 834 aa23.64■■□□□ 1.37
SSH3-209ENST00000532600 MAP3K11Q16584 847 aa23.64■■□□□ 1.37
SSH3-209ENST00000532600 NBPF12Q5TAG4 269 aaPredicted RBP23.64■■□□□ 1.37
SSH3-209ENST00000532600 CDAN1Q8IWY9 1227 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms