RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 VPS37DQ86XT2 251 aa15.72■□□□□ 0.11
CCDC90B-216ENST00000529856 CNTROBQ8N137 903 aa15.72■□□□□ 0.11
CCDC90B-216ENST00000529856 ZC3H15Q8WU90 426 aaKnown RBP15.72■□□□□ 0.11
CCDC90B-216ENST00000529856 FAM205AQ6ZU69 1335 aa15.71■□□□□ 0.11
CCDC90B-216ENST00000529856 FKBP1AP62942 108 aaKnown RBP15.71■□□□□ 0.11
CCDC90B-216ENST00000529856 TFCP2Q12800 502 aa15.71■□□□□ 0.11
CCDC90B-216ENST00000529856 TBC1D10BQ4KMP7 808 aaPredicted RBP15.71■□□□□ 0.11
CCDC90B-216ENST00000529856 RBM26Q5T8P6 1007 aaKnown RBP15.71■□□□□ 0.11
CCDC90B-216ENST00000529856 MMP14P50281 582 aa15.7■□□□□ 0.1
CCDC90B-216ENST00000529856 APLP1P51693 650 aa15.7■□□□□ 0.1
CCDC90B-216ENST00000529856 CERS5Q8N5B7 392 aa15.7■□□□□ 0.1
CCDC90B-216ENST00000529856 AKAP2Q9Y2D5 859 aa15.7■□□□□ 0.1
CCDC90B-216ENST00000529856 NOP58Q9Y2X3 529 aaKnown RBP15.7■□□□□ 0.1
CCDC90B-216ENST00000529856 PASKQ96RG2 1323 aa15.69■□□□□ 0.1
CCDC90B-216ENST00000529856 SURF6O75683 361 aaKnown RBP15.69■□□□□ 0.1
CCDC90B-216ENST00000529856 RRP1P56182 461 aaKnown RBP15.69■□□□□ 0.1
CCDC90B-216ENST00000529856 TIMM10P62072 90 aa15.69■□□□□ 0.1
CCDC90B-216ENST00000529856 KIF4BQ2VIQ3 1234 aa15.69■□□□□ 0.1
CCDC90B-216ENST00000529856 KIAA0825Q8IV33 1275 aa15.69■□□□□ 0.1
CCDC90B-216ENST00000529856 RPAP2Q8IXW5 612 aaPredicted RBP15.69■□□□□ 0.1
CCDC90B-216ENST00000529856 OGFOD1Q8N543 542 aa15.69■□□□□ 0.1
CCDC90B-216ENST00000529856 MYOZ2Q9NPC6 264 aa15.69■□□□□ 0.1
CCDC90B-216ENST00000529856 IQSEC3Q9UPP2 1182 aaPredicted RBP15.69■□□□□ 0.1
CCDC90B-216ENST00000529856 JAG2Q9Y219 1238 aa15.69■□□□□ 0.1
CCDC90B-216ENST00000529856 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.69■□□□□ 0.1
CCDC90B-216ENST00000529856 A0A1B0GUL7 405 aa15.67■□□□□ 0.1
CCDC90B-216ENST00000529856 FRAT2O75474 233 aaPredicted RBP15.67■□□□□ 0.1
CCDC90B-216ENST00000529856 ADORA1P30542 326 aa15.67■□□□□ 0.1
CCDC90B-216ENST00000529856 SCARF1Q14162 830 aa15.67■□□□□ 0.1
CCDC90B-216ENST00000529856 HDAC9Q9UKV0 1011 aa15.67■□□□□ 0.1
CCDC90B-216ENST00000529856 ZBTB22O15209 634 aa15.66■□□□□ 0.1
CCDC90B-216ENST00000529856 CHAF1AQ13111 956 aaPredicted RBP15.66■□□□□ 0.1
CCDC90B-216ENST00000529856 OS9Q13438 667 aaPredicted RBP15.66■□□□□ 0.1
CCDC90B-216ENST00000529856 MFSD14BQ5SR56 506 aa15.66■□□□□ 0.1
CCDC90B-216ENST00000529856 CDC37L1Q7L3B6 337 aa15.66■□□□□ 0.1
CCDC90B-216ENST00000529856 SIRT2Q8IXJ6 389 aa15.66■□□□□ 0.1
CCDC90B-216ENST00000529856 XAGE2Q96GT9 111 aa15.66■□□□□ 0.1
CCDC90B-216ENST00000529856 GPR108Q9NPR9 543 aa15.66■□□□□ 0.1
CCDC90B-216ENST00000529856 GNL3LQ9NVN8 582 aaKnown RBP15.66■□□□□ 0.1
CCDC90B-216ENST00000529856 POLR2AP24928 1970 aaKnown RBP15.66■□□□□ 0.1
CCDC90B-216ENST00000529856 F8W031 263 aaPredicted RBP15.65■□□□□ 0.1
CCDC90B-216ENST00000529856 PHKA1P46020 1223 aa15.65■□□□□ 0.1
CCDC90B-216ENST00000529856 CCDC102BQ68D86 513 aa15.65■□□□□ 0.1
CCDC90B-216ENST00000529856 TBC1D22AQ8WUA7 517 aa15.65■□□□□ 0.1
CCDC90B-216ENST00000529856 DCPSQ96C86 337 aaKnown RBP15.65■□□□□ 0.1
CCDC90B-216ENST00000529856 NEUROD6Q96NK8 337 aa15.65■□□□□ 0.1
CCDC90B-216ENST00000529856 GLIS2Q9BZE0 524 aaPredicted RBP15.65■□□□□ 0.1
CCDC90B-216ENST00000529856 ASTN2O75129 1339 aaPredicted RBP15.65■□□□□ 0.1
CCDC90B-216ENST00000529856 TRAF5O00463 557 aa15.64■□□□□ 0.09
CCDC90B-216ENST00000529856 HMMRO75330 724 aa15.64■□□□□ 0.09
CCDC90B-216ENST00000529856 HTRA3P83110 453 aa15.64■□□□□ 0.09
CCDC90B-216ENST00000529856 FMR1Q06787 632 aaKnown RBP eCLIP15.64■□□□□ 0.09
CCDC90B-216ENST00000529856 NBPF9Q3BBW0 867 aa15.64■□□□□ 0.09
CCDC90B-216ENST00000529856 USP48Q86UV5 1035 aa15.64■□□□□ 0.09
CCDC90B-216ENST00000529856 ARAP2Q8WZ64 1704 aa15.64■□□□□ 0.09
CCDC90B-216ENST00000529856 ZBED3Q96IU2 234 aaPredicted RBP15.64■□□□□ 0.09
CCDC90B-216ENST00000529856 WNT10BO00744 389 aa15.63■□□□□ 0.09
CCDC90B-216ENST00000529856 SEMA3EO15041 775 aa15.63■□□□□ 0.09
CCDC90B-216ENST00000529856 GRIK5Q16478 980 aa15.63■□□□□ 0.09
CCDC90B-216ENST00000529856 TNNI3KQ59H18 835 aa15.63■□□□□ 0.09
CCDC90B-216ENST00000529856 MTMR14Q8NCE2 650 aa15.63■□□□□ 0.09
CCDC90B-216ENST00000529856 WDR66Q8TBY9 1149 aa15.63■□□□□ 0.09
CCDC90B-216ENST00000529856 CREBZFQ9NS37 354 aa15.63■□□□□ 0.09
CCDC90B-216ENST00000529856 GGA3Q9NZ52 723 aa15.63■□□□□ 0.09
CCDC90B-216ENST00000529856 DENND2AQ9ULE3 1009 aa15.63■□□□□ 0.09
CCDC90B-216ENST00000529856 TTF2Q9UNY4 1162 aaKnown RBP15.63■□□□□ 0.09
CCDC90B-216ENST00000529856 EXOC6BQ9Y2D4 811 aa15.63■□□□□ 0.09
CCDC90B-216ENST00000529856 FPGT-TNNI3KV9GXZ4 949 aa15.63■□□□□ 0.09
CCDC90B-216ENST00000529856 TMEM88BA6NKF7 163 aa15.62■□□□□ 0.09
CCDC90B-216ENST00000529856 DLGAP5Q15398 846 aa15.62■□□□□ 0.09
CCDC90B-216ENST00000529856 HSP90AB4PQ58FF6 505 aa15.62■□□□□ 0.09
CCDC90B-216ENST00000529856 ANGEL2Q5VTE6 544 aaKnown RBP15.62■□□□□ 0.09
CCDC90B-216ENST00000529856 KRT26Q7Z3Y9 468 aa15.62■□□□□ 0.09
CCDC90B-216ENST00000529856 ERC1Q8IUD2 1116 aa15.62■□□□□ 0.09
CCDC90B-216ENST00000529856 SUGT1Q9Y2Z0 365 aa15.62■□□□□ 0.09
CCDC90B-216ENST00000529856 PITPNM2Q9BZ72 1349 aa15.62■□□□□ 0.09
CCDC90B-216ENST00000529856 MYH13Q9UKX3 1938 aa15.61■□□□□ 0.09
CCDC90B-216ENST00000529856 COL1A1P02452 1464 aaPredicted RBP15.61■□□□□ 0.09
CCDC90B-216ENST00000529856 CFAP100Q494V2 611 aa15.61■□□□□ 0.09
CCDC90B-216ENST00000529856 GORABQ5T7V8 394 aa15.61■□□□□ 0.09
CCDC90B-216ENST00000529856 CST9Q5W186 159 aa15.61■□□□□ 0.09
CCDC90B-216ENST00000529856 DNAJC5GQ8N7S2 189 aa15.61■□□□□ 0.09
CCDC90B-216ENST00000529856 MRIQ9BWK5 157 aa15.61■□□□□ 0.09
CCDC90B-216ENST00000529856 SERPINA10Q9UK55 444 aa15.61■□□□□ 0.09
CCDC90B-216ENST00000529856 TRPM7Q96QT4 1865 aa15.61■□□□□ 0.09
CCDC90B-216ENST00000529856 ADM5C9JUS6 153 aa15.6■□□□□ 0.09
CCDC90B-216ENST00000529856 HDLBPQ00341 1268 aaKnown RBP15.6■□□□□ 0.09
CCDC90B-216ENST00000529856 DLK2Q6UY11 383 aa15.6■□□□□ 0.09
CCDC90B-216ENST00000529856 SULF1Q8IWU6 871 aa15.6■□□□□ 0.09
CCDC90B-216ENST00000529856 RHPN1Q8TCX5 695 aa15.6■□□□□ 0.09
CCDC90B-216ENST00000529856 PRMT6Q96LA8 375 aaPredicted RBP15.6■□□□□ 0.09
CCDC90B-216ENST00000529856 CRBNQ96SW2 442 aa15.6■□□□□ 0.09
CCDC90B-216ENST00000529856 PCDHAC2Q9Y5I4 1007 aa15.6■□□□□ 0.09
CCDC90B-216ENST00000529856 CEP350Q5VT06 3117 aa15.6■□□□□ 0.09
CCDC90B-216ENST00000529856 SPDYE2BA6NHP3 402 aa15.59■□□□□ 0.09
CCDC90B-216ENST00000529856 SPDYE6P0CI01 402 aa15.59■□□□□ 0.09
CCDC90B-216ENST00000529856 ARID4AP29374 1257 aaPredicted RBP15.59■□□□□ 0.09
CCDC90B-216ENST00000529856 RBM5P52756 815 aaKnown RBP eCLIP15.59■□□□□ 0.09
CCDC90B-216ENST00000529856 RASGRF1Q13972 1273 aa15.59■□□□□ 0.09
CCDC90B-216ENST00000529856 EAF2Q96CJ1 260 aaPredicted RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms