RNA–Protein interactions for RNA: ENST00000528999.5

PUF60-213, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-213ENST00000528999 FOXD4L3Q6VB84 417 aaPredicted RBP12.58□□□□□ -0.4
PUF60-213ENST00000528999 RALYLQ86SE5 291 aaKnown RBP12.58□□□□□ -0.4
PUF60-213ENST00000528999 TTC6Q86TZ1 520 aa12.58□□□□□ -0.4
PUF60-213ENST00000528999 MB21D2Q8IYB1 491 aaPredicted RBP12.58□□□□□ -0.4
PUF60-213ENST00000528999 SPATA32Q96LK8 384 aa12.58□□□□□ -0.4
PUF60-213ENST00000528999 RCOR1Q9UKL0 485 aa12.58□□□□□ -0.4
PUF60-213ENST00000528999 LRP5O75197 1615 aa12.58□□□□□ -0.4
PUF60-213ENST00000528999 CARMIL3Q8ND23 1372 aa12.57□□□□□ -0.4
PUF60-213ENST00000528999 PATL2C9JE40 543 aaKnown RBP12.57□□□□□ -0.4
PUF60-213ENST00000528999 FOXP2O15409 715 aa12.57□□□□□ -0.4
PUF60-213ENST00000528999 ADAMTS2O95450 1211 aa12.57□□□□□ -0.4
PUF60-213ENST00000528999 CCDC192P0DO97 292 aa12.57□□□□□ -0.4
PUF60-213ENST00000528999 COL9A3Q14050 684 aaPredicted RBP12.57□□□□□ -0.4
PUF60-213ENST00000528999 SF3B3Q15393 1217 aaKnown RBP12.57□□□□□ -0.4
PUF60-213ENST00000528999 SPATA5Q8NB90 893 aa12.57□□□□□ -0.4
PUF60-213ENST00000528999 LEO1Q8WVC0 666 aaPredicted RBP12.57□□□□□ -0.4
PUF60-213ENST00000528999 TMEM87BQ96K49 555 aa12.57□□□□□ -0.4
PUF60-213ENST00000528999 CCDC85AQ96PX6 553 aaPredicted RBP12.57□□□□□ -0.4
PUF60-213ENST00000528999 FUCA2Q9BTY2 467 aa12.57□□□□□ -0.4
PUF60-213ENST00000528999 PUS7LQ9H0K6 701 aaKnown RBP12.57□□□□□ -0.4
PUF60-213ENST00000528999 RTN4Q9NQC3 1192 aaKnown RBP12.57□□□□□ -0.4
PUF60-213ENST00000528999 NOL7Q9UMY1 257 aaKnown RBP12.57□□□□□ -0.4
PUF60-213ENST00000528999 SALL1Q9NSC2 1324 aa12.57□□□□□ -0.4
PUF60-213ENST00000528999 PHLPP1O60346 1717 aa12.57□□□□□ -0.4
PUF60-213ENST00000528999 MYH3P11055 1940 aa12.56□□□□□ -0.4
PUF60-213ENST00000528999 TCRBV5S4A2TA0A5A2 114 aa12.56□□□□□ -0.4
PUF60-213ENST00000528999 PTPDC1A2A3K4 754 aa12.56□□□□□ -0.4
PUF60-213ENST00000528999 CTAGE5O15320 804 aa12.56□□□□□ -0.4
PUF60-213ENST00000528999 PRC1O43663 620 aa12.56□□□□□ -0.4
PUF60-213ENST00000528999 JAK2O60674 1132 aa12.56□□□□□ -0.4
PUF60-213ENST00000528999 CTDNEP1O95476 244 aa12.56□□□□□ -0.4
PUF60-213ENST00000528999 NTSR2O95665 410 aa12.56□□□□□ -0.4
PUF60-213ENST00000528999 PDE6AP16499 860 aa12.56□□□□□ -0.4
PUF60-213ENST00000528999 APOBRQ0VD83 1088 aa12.56□□□□□ -0.4
PUF60-213ENST00000528999 VPS72Q15906 364 aa12.56□□□□□ -0.4
PUF60-213ENST00000528999 RBM43Q6ZSC3 357 aaKnown RBP12.56□□□□□ -0.4
PUF60-213ENST00000528999 STRBPQ96SI9 672 aaKnown RBP12.56□□□□□ -0.4
PUF60-213ENST00000528999 PIH1D3Q9NQM4 214 aaKnown RBP12.56□□□□□ -0.4
PUF60-213ENST00000528999 DOT1LQ8TEK3 1739 aa12.56□□□□□ -0.4
PUF60-213ENST00000528999 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.55□□□□□ -0.4
PUF60-213ENST00000528999 CDKL5O76039 1030 aa12.55□□□□□ -0.4
PUF60-213ENST00000528999 PHKA1P46020 1223 aa12.55□□□□□ -0.4
PUF60-213ENST00000528999 ITPK1Q13572 414 aa12.55□□□□□ -0.4
PUF60-213ENST00000528999 MAP3K11Q16584 847 aa12.55□□□□□ -0.4
PUF60-213ENST00000528999 TTLL5Q6EMB2 1281 aa12.55□□□□□ -0.4
PUF60-213ENST00000528999 CNNM2Q9H8M5 875 aa12.55□□□□□ -0.4
PUF60-213ENST00000528999 GNL3LQ9NVN8 582 aaKnown RBP12.55□□□□□ -0.4
PUF60-213ENST00000528999 NIP7Q9Y221 180 aaKnown RBP eCLIP12.55□□□□□ -0.4
PUF60-213ENST00000528999 CNTNAP4Q9C0A0 1308 aa12.55□□□□□ -0.4
PUF60-213ENST00000528999 ZNF500O60304 480 aaPredicted RBP12.54□□□□□ -0.4
PUF60-213ENST00000528999 TPM3P06753 285 aa12.54□□□□□ -0.4
PUF60-213ENST00000528999 MSNP26038 577 aaKnown RBP12.54□□□□□ -0.4
PUF60-213ENST00000528999 UBE4AQ14139 1066 aa12.54□□□□□ -0.4
PUF60-213ENST00000528999 SLFNL1Q499Z3 407 aa12.54□□□□□ -0.4
PUF60-213ENST00000528999 CPLX2Q6PUV4 134 aaKnown RBP12.54□□□□□ -0.4
PUF60-213ENST00000528999 FERMT3Q86UX7 667 aa12.54□□□□□ -0.4
PUF60-213ENST00000528999 NACAP1Q9BZK3 213 aa12.54□□□□□ -0.4
PUF60-213ENST00000528999 NUP62CLQ9H1M0 184 aa12.54□□□□□ -0.4
PUF60-213ENST00000528999 PNPLA7Q6ZV29 1317 aa12.54□□□□□ -0.4
PUF60-213ENST00000528999 ZNF532Q9HCE3 1301 aa12.54□□□□□ -0.4
PUF60-213ENST00000528999 KDM4AO75164 1064 aa12.53□□□□□ -0.4
PUF60-213ENST00000528999 IDH1O75874 414 aaKnown RBP12.53□□□□□ -0.4
PUF60-213ENST00000528999 HCLS1P14317 486 aaPredicted RBP12.53□□□□□ -0.4
PUF60-213ENST00000528999 ADD1P35611 737 aaKnown RBP12.53□□□□□ -0.4
PUF60-213ENST00000528999 LIFRP42702 1097 aa12.53□□□□□ -0.4
PUF60-213ENST00000528999 BRAPQ7Z569 592 aa12.53□□□□□ -0.4
PUF60-213ENST00000528999 TMTC2Q8N394 836 aa12.53□□□□□ -0.4
PUF60-213ENST00000528999 AIDAQ96BJ3 306 aa12.53□□□□□ -0.4
PUF60-213ENST00000528999 DDX11Q96FC9 970 aa12.53□□□□□ -0.4
PUF60-213ENST00000528999 LRRC2Q9BYS8 371 aa12.53□□□□□ -0.4
PUF60-213ENST00000528999 KRT23Q9C075 422 aa12.53□□□□□ -0.4
PUF60-213ENST00000528999 NYXQ9GZU5 481 aa12.53□□□□□ -0.4
PUF60-213ENST00000528999 CLSTN2Q9H4D0 955 aa12.53□□□□□ -0.4
PUF60-213ENST00000528999 BSDC1Q9NW68 430 aaPredicted RBP12.53□□□□□ -0.4
PUF60-213ENST00000528999 TFIP11Q9UBB9 837 aaKnown RBP12.53□□□□□ -0.4
PUF60-213ENST00000528999 ANGEL1Q9UNK9 670 aaKnown RBP12.53□□□□□ -0.4
PUF60-213ENST00000528999 ARAP2Q8WZ64 1704 aa12.53□□□□□ -0.4
PUF60-213ENST00000528999 AKAP11Q9UKA4 1901 aa12.52□□□□□ -0.4
PUF60-213ENST00000528999 SEMA3EO15041 775 aa12.52□□□□□ -0.41
PUF60-213ENST00000528999 NT5C2P49902 561 aa12.52□□□□□ -0.41
PUF60-213ENST00000528999 RCAN1P53805 252 aa12.52□□□□□ -0.41
PUF60-213ENST00000528999 SGMS1Q86VZ5 419 aa12.52□□□□□ -0.41
PUF60-213ENST00000528999 ANKRD18AQ8IVF6 992 aa12.52□□□□□ -0.41
PUF60-213ENST00000528999 FNBP4Q8N3X1 1017 aaPredicted RBP12.52□□□□□ -0.41
PUF60-213ENST00000528999 ACSBG1Q96GR2 724 aa12.52□□□□□ -0.41
PUF60-213ENST00000528999 TNMDQ9H2S6 317 aa12.52□□□□□ -0.41
PUF60-213ENST00000528999 RTEL1Q9NZ71 1219 aa12.52□□□□□ -0.41
PUF60-213ENST00000528999 PDS5AQ29RF7 1337 aaKnown RBP12.52□□□□□ -0.41
PUF60-213ENST00000528999 TCHHQ07283 1943 aa12.51□□□□□ -0.41
PUF60-213ENST00000528999 KLF18A0A0U1RQI7 1052 aa12.51□□□□□ -0.41
PUF60-213ENST00000528999 A0A1W2PQ27 194 aa12.51□□□□□ -0.41
PUF60-213ENST00000528999 A0A1W2PQ64 194 aa12.51□□□□□ -0.41
PUF60-213ENST00000528999 A0A1W2PQD8 194 aa12.51□□□□□ -0.41
PUF60-213ENST00000528999 CPLX1O14810 134 aa12.51□□□□□ -0.41
PUF60-213ENST00000528999 APPP05067 770 aa12.51□□□□□ -0.41
PUF60-213ENST00000528999 PCP11498 1178 aaKnown RBP12.51□□□□□ -0.41
PUF60-213ENST00000528999 FDPSP14324 419 aaKnown RBP12.51□□□□□ -0.41
PUF60-213ENST00000528999 TERF1P54274 439 aa12.51□□□□□ -0.41
PUF60-213ENST00000528999 ANTXR2P58335 489 aa12.51□□□□□ -0.41
PUF60-213ENST00000528999 CCT2P78371 535 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms