RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 TBC1D2Q9BYX2 928 aa9.15□□□□□ -0.94
ITGB1-218ENST00000528877 HYPKQ9NX55 129 aa9.15□□□□□ -0.94
ITGB1-218ENST00000528877 GLTPD2A6NH11 291 aa9.14□□□□□ -0.95
ITGB1-218ENST00000528877 TOMM70O94826 608 aa9.14□□□□□ -0.95
ITGB1-218ENST00000528877 ANXA1P04083 346 aa9.14□□□□□ -0.95
ITGB1-218ENST00000528877 GPTP24298 496 aa9.14□□□□□ -0.95
ITGB1-218ENST00000528877 RPIAP49247 311 aa9.14□□□□□ -0.95
ITGB1-218ENST00000528877 FKBP4Q02790 459 aaKnown RBP eCLIP9.14□□□□□ -0.95
ITGB1-218ENST00000528877 TCIRG1Q13488 830 aa9.14□□□□□ -0.95
ITGB1-218ENST00000528877 SLC10A5Q5PT55 438 aa9.14□□□□□ -0.95
ITGB1-218ENST00000528877 NLRP10Q86W26 655 aa9.14□□□□□ -0.95
ITGB1-218ENST00000528877 RTKN2Q8IZC4 609 aa9.14□□□□□ -0.95
ITGB1-218ENST00000528877 PLBD2Q8NHP8 589 aa9.14□□□□□ -0.95
ITGB1-218ENST00000528877 CRAMP1Q96RY5 1269 aa9.14□□□□□ -0.95
ITGB1-218ENST00000528877 PSMD1Q99460 953 aa9.14□□□□□ -0.95
ITGB1-218ENST00000528877 CHMP4AQ9BY43 222 aa9.14□□□□□ -0.95
ITGB1-218ENST00000528877 MRS2Q9HD23 443 aa9.14□□□□□ -0.95
ITGB1-218ENST00000528877 NMRK2Q9NPI5 230 aa9.14□□□□□ -0.95
ITGB1-218ENST00000528877 LAS1LQ9Y4W2 734 aaKnown RBP9.14□□□□□ -0.95
ITGB1-218ENST00000528877 MOXD2PA6NHM9 499 aa9.13□□□□□ -0.95
ITGB1-218ENST00000528877 C6orf229H3BNL8 230 aa9.13□□□□□ -0.95
ITGB1-218ENST00000528877 PPEF1O14829 653 aaPredicted RBP9.13□□□□□ -0.95
ITGB1-218ENST00000528877 DXOO77932 396 aaKnown RBP9.13□□□□□ -0.95
ITGB1-218ENST00000528877 GTF2E1P29083 439 aaPredicted RBP9.13□□□□□ -0.95
ITGB1-218ENST00000528877 TRIM28Q13263 835 aaKnown RBP9.13□□□□□ -0.95
ITGB1-218ENST00000528877 CC2D2BQ6DHV5 1058 aa9.13□□□□□ -0.95
ITGB1-218ENST00000528877 WWC1Q8IX03 1113 aa9.13□□□□□ -0.95
ITGB1-218ENST00000528877 HLA-CQ95604 372 aa9.13□□□□□ -0.95
ITGB1-218ENST00000528877 ZNF775Q96BV0 537 aaPredicted RBP9.13□□□□□ -0.95
ITGB1-218ENST00000528877 ISCA1Q9BUE6 129 aa9.13□□□□□ -0.95
ITGB1-218ENST00000528877 UTP14AQ9BVJ6 771 aaKnown RBP9.13□□□□□ -0.95
ITGB1-218ENST00000528877 FCF1Q9Y324 198 aaKnown RBP9.13□□□□□ -0.95
ITGB1-218ENST00000528877 CCDC88AQ3V6T2 1871 aa9.13□□□□□ -0.95
ITGB1-218ENST00000528877 SH3TC1Q8TE82 1336 aa9.12□□□□□ -0.95
ITGB1-218ENST00000528877 LTBP1Q14766 1721 aa9.12□□□□□ -0.95
ITGB1-218ENST00000528877 FAM177BA6PVY3 158 aa9.12□□□□□ -0.95
ITGB1-218ENST00000528877 HSPA6P17066 643 aa9.12□□□□□ -0.95
ITGB1-218ENST00000528877 GUCA2AQ02747 115 aa9.12□□□□□ -0.95
ITGB1-218ENST00000528877 SPRYD7Q5W111 196 aa9.12□□□□□ -0.95
ITGB1-218ENST00000528877 RSBN1LQ6PCB5 846 aaPredicted RBP9.12□□□□□ -0.95
ITGB1-218ENST00000528877 RPGRQ92834 1020 aaKnown RBP9.12□□□□□ -0.95
ITGB1-218ENST00000528877 DUOX1Q9NRD9 1551 aa9.12□□□□□ -0.95
ITGB1-218ENST00000528877 ABCC4O15439 1325 aa9.11□□□□□ -0.95
ITGB1-218ENST00000528877 COL4A5P29400 1685 aa9.11□□□□□ -0.95
ITGB1-218ENST00000528877 SPTLC1O15269 473 aa9.11□□□□□ -0.95
ITGB1-218ENST00000528877 ZBTB24O43167 697 aaPredicted RBP9.11□□□□□ -0.95
ITGB1-218ENST00000528877 JUNDP17535 347 aa9.11□□□□□ -0.95
ITGB1-218ENST00000528877 FSTL1Q12841 308 aa9.11□□□□□ -0.95
ITGB1-218ENST00000528877 AIMP1Q12904 312 aaKnown RBP9.11□□□□□ -0.95
ITGB1-218ENST00000528877 MTMR2Q13614 643 aa9.11□□□□□ -0.95
ITGB1-218ENST00000528877 ZNF598Q86UK7 904 aaKnown RBP9.11□□□□□ -0.95
ITGB1-218ENST00000528877 C8orf58Q8NAV2 365 aa9.11□□□□□ -0.95
ITGB1-218ENST00000528877 DDRGK1Q96HY6 314 aa9.11□□□□□ -0.95
ITGB1-218ENST00000528877 RBM17Q96I25 401 aaKnown RBP9.11□□□□□ -0.95
ITGB1-218ENST00000528877 PRDM9Q9NQV7 894 aa9.11□□□□□ -0.95
ITGB1-218ENST00000528877 ADAMTSL1Q8N6G6 1762 aa9.11□□□□□ -0.95
ITGB1-218ENST00000528877 SCN4AP35499 1836 aa9.1□□□□□ -0.95
ITGB1-218ENST00000528877 FANCIQ9NVI1 1328 aa9.1□□□□□ -0.95
ITGB1-218ENST00000528877 NRG2O14511 850 aaPredicted RBP9.1□□□□□ -0.95
ITGB1-218ENST00000528877 CD2BP2O95400 341 aaKnown RBP9.1□□□□□ -0.95
ITGB1-218ENST00000528877 TUSC1Q2TAM9 212 aa9.1□□□□□ -0.95
ITGB1-218ENST00000528877 PRPF38BQ5VTL8 546 aaKnown RBP9.1□□□□□ -0.95
ITGB1-218ENST00000528877 CCDC30Q5VVM6 783 aa9.1□□□□□ -0.95
ITGB1-218ENST00000528877 OLFM4Q6UX06 510 aa9.1□□□□□ -0.95
ITGB1-218ENST00000528877 WDR63Q8IWG1 891 aa9.1□□□□□ -0.95
ITGB1-218ENST00000528877 NLRP3Q96P20 1036 aa9.1□□□□□ -0.95
ITGB1-218ENST00000528877 TRMT112Q9UI30 125 aaKnown RBP9.1□□□□□ -0.95
ITGB1-218ENST00000528877 PCDHGC3Q9UN70 934 aa9.1□□□□□ -0.95
ITGB1-218ENST00000528877 ZNF521Q96K83 1311 aa9.09□□□□□ -0.95
ITGB1-218ENST00000528877 FZD9O00144 591 aa9.09□□□□□ -0.95
ITGB1-218ENST00000528877 VEGFAP15692 232 aaPredicted RBP9.09□□□□□ -0.95
ITGB1-218ENST00000528877 NDUFV2P19404 249 aa9.09□□□□□ -0.95
ITGB1-218ENST00000528877 IARSP41252 1262 aaKnown RBP9.09□□□□□ -0.95
ITGB1-218ENST00000528877 DESI1Q6ICB0 168 aa9.09□□□□□ -0.95
ITGB1-218ENST00000528877 LIAT1Q6ZQX7 453 aa9.09□□□□□ -0.95
ITGB1-218ENST00000528877 TMC4Q7Z404 712 aa9.09□□□□□ -0.95
ITGB1-218ENST00000528877 TSPYL6Q8N831 410 aa9.09□□□□□ -0.95
ITGB1-218ENST00000528877 TSR2Q969E8 191 aaKnown RBP9.09□□□□□ -0.95
ITGB1-218ENST00000528877 RTFDC1Q9BY42 306 aaPredicted RBP9.09□□□□□ -0.95
ITGB1-218ENST00000528877 VPS33BQ9H267 617 aa9.09□□□□□ -0.95
ITGB1-218ENST00000528877 ATP6V0A2Q9Y487 856 aa9.09□□□□□ -0.95
ITGB1-218ENST00000528877 COL4A1P02462 1669 aa9.08□□□□□ -0.96
ITGB1-218ENST00000528877 POTECB2RU33 542 aa9.08□□□□□ -0.96
ITGB1-218ENST00000528877 BBOX1O75936 387 aa9.08□□□□□ -0.96
ITGB1-218ENST00000528877 DDX58O95786 925 aaKnown RBP9.08□□□□□ -0.96
ITGB1-218ENST00000528877 SF3B3Q15393 1217 aaKnown RBP9.08□□□□□ -0.96
ITGB1-218ENST00000528877 RIC3Q7Z5B4 369 aa9.08□□□□□ -0.96
ITGB1-218ENST00000528877 C16orf71Q8IYS4 520 aaPredicted RBP9.08□□□□□ -0.96
ITGB1-218ENST00000528877 ZBTB38Q8NAP3 1195 aaPredicted RBP9.08□□□□□ -0.96
ITGB1-218ENST00000528877 CCDC191Q8NCU4 936 aa9.08□□□□□ -0.96
ITGB1-218ENST00000528877 SMC1BQ8NDV3 1235 aa9.08□□□□□ -0.96
ITGB1-218ENST00000528877 KDM4CQ9H3R0 1056 aa9.08□□□□□ -0.96
ITGB1-218ENST00000528877 PHAXQ9H814 394 aaKnown RBP9.08□□□□□ -0.96
ITGB1-218ENST00000528877 ZNF277Q9NRM2 450 aaPredicted RBP9.08□□□□□ -0.96
ITGB1-218ENST00000528877 CACNA1FO60840 1977 aa9.08□□□□□ -0.96
ITGB1-218ENST00000528877 ZNF541Q9H0D2 1346 aa9.07□□□□□ -0.96
ITGB1-218ENST00000528877 PCNTO95613 3336 aa9.07□□□□□ -0.96
ITGB1-218ENST00000528877 IQCA1LA6NCM1 817 aa9.07□□□□□ -0.96
ITGB1-218ENST00000528877 HCLS1P14317 486 aaPredicted RBP9.07□□□□□ -0.96
ITGB1-218ENST00000528877 HSP90B1P14625 803 aaKnown RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms