RNA–Protein interactions for RNA: ENST00000527624.1

PCDHA6-202, Transcript of protocadherin alpha 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHA6, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-202ENST00000527624 HMGB1P09429 215 aaKnown RBP20.5■□□□□ 0.87
PCDHA6-202ENST00000527624 PDE6AP16499 860 aa20.5■□□□□ 0.87
PCDHA6-202ENST00000527624 DHX32Q7L7V1 743 aaKnown RBP20.5■□□□□ 0.87
PCDHA6-202ENST00000527624 WTIPA6NIX2 430 aaPredicted RBP20.5■□□□□ 0.87
PCDHA6-202ENST00000527624 GDPD2Q9HCC8 539 aa20.5■□□□□ 0.87
PCDHA6-202ENST00000527624 RRAGDQ9NQL2 400 aaPredicted RBP20.5■□□□□ 0.87
PCDHA6-202ENST00000527624 RGL2O15211 777 aa20.49■□□□□ 0.87
PCDHA6-202ENST00000527624 CHST3Q7LGC8 479 aa20.49■□□□□ 0.87
PCDHA6-202ENST00000527624 GPT2Q8TD30 523 aa20.49■□□□□ 0.87
PCDHA6-202ENST00000527624 QTRT2Q9H974 415 aaKnown RBP20.49■□□□□ 0.87
PCDHA6-202ENST00000527624 CTNNA3Q9UI47 895 aa20.49■□□□□ 0.87
PCDHA6-202ENST00000527624 ARAP2Q8WZ64 1704 aa20.49■□□□□ 0.87
PCDHA6-202ENST00000527624 EP400Q96L91 3159 aa20.49■□□□□ 0.87
PCDHA6-202ENST00000527624 ZNF445P59923 1031 aa20.49■□□□□ 0.87
PCDHA6-202ENST00000527624 CAVIN1Q6NZI2 390 aaKnown RBP20.49■□□□□ 0.87
PCDHA6-202ENST00000527624 CELF1Q92879 486 aaKnown RBP20.49■□□□□ 0.87
PCDHA6-202ENST00000527624 NYXQ9GZU5 481 aa20.49■□□□□ 0.87
PCDHA6-202ENST00000527624 VPS37CA5D8V6 355 aaPredicted RBP20.48■□□□□ 0.87
PCDHA6-202ENST00000527624 UBE3CQ15386 1083 aa20.48■□□□□ 0.87
PCDHA6-202ENST00000527624 IMMTQ16891 758 aaKnown RBP20.48■□□□□ 0.87
PCDHA6-202ENST00000527624 SLC10A5Q5PT55 438 aa20.48■□□□□ 0.87
PCDHA6-202ENST00000527624 FAM196AQ6ZSG2 479 aa20.48■□□□□ 0.87
PCDHA6-202ENST00000527624 LRRC4BQ9NT99 713 aa20.48■□□□□ 0.87
PCDHA6-202ENST00000527624 IQSEC3Q9UPP2 1182 aaPredicted RBP20.48■□□□□ 0.87
PCDHA6-202ENST00000527624 F13A1P00488 732 aa20.47■□□□□ 0.87
PCDHA6-202ENST00000527624 MTMR6Q9Y217 621 aa20.47■□□□□ 0.87
PCDHA6-202ENST00000527624 TCRBV5S4A2TA0A5A2 114 aa20.47■□□□□ 0.87
PCDHA6-202ENST00000527624 RFC4P35249 363 aa20.47■□□□□ 0.87
PCDHA6-202ENST00000527624 EXOSC10Q01780 885 aaKnown RBP20.47■□□□□ 0.87
PCDHA6-202ENST00000527624 GTF3C6Q969F1 213 aa20.47■□□□□ 0.87
PCDHA6-202ENST00000527624 BSDC1Q9NW68 430 aaPredicted RBP20.47■□□□□ 0.87
PCDHA6-202ENST00000527624 MYH7P12883 1935 aa20.46■□□□□ 0.87
PCDHA6-202ENST00000527624 ZSCAN23Q3MJ62 389 aa20.46■□□□□ 0.87
PCDHA6-202ENST00000527624 MAGEB6Q8N7X4 407 aa20.46■□□□□ 0.87
PCDHA6-202ENST00000527624 BCL11BQ9C0K0 894 aaPredicted RBP20.46■□□□□ 0.87
PCDHA6-202ENST00000527624 NSFL1CQ9UNZ2 370 aaKnown RBP20.46■□□□□ 0.87
PCDHA6-202ENST00000527624 TAF1P21675 1872 aa20.46■□□□□ 0.87
PCDHA6-202ENST00000527624 GYG1P46976 350 aa20.46■□□□□ 0.87
PCDHA6-202ENST00000527624 APOBRQ0VD83 1088 aa20.46■□□□□ 0.87
PCDHA6-202ENST00000527624 TRAPPC3LQ5T215 181 aa20.46■□□□□ 0.87
PCDHA6-202ENST00000527624 LARP1BQ659C4 914 aaKnown RBP20.46■□□□□ 0.87
PCDHA6-202ENST00000527624 TPTE2Q6XPS3 522 aa20.46■□□□□ 0.87
PCDHA6-202ENST00000527624 NLRP3Q96P20 1036 aa20.46■□□□□ 0.87
PCDHA6-202ENST00000527624 MYO5AQ9Y4I1 1855 aaKnown RBP20.46■□□□□ 0.87
PCDHA6-202ENST00000527624 LY75O60449 1722 aa20.45■□□□□ 0.86
PCDHA6-202ENST00000527624 NPHP1O15259 732 aa20.45■□□□□ 0.86
PCDHA6-202ENST00000527624 JAK2O60674 1132 aa20.45■□□□□ 0.86
PCDHA6-202ENST00000527624 APPP05067 770 aa20.45■□□□□ 0.86
PCDHA6-202ENST00000527624 MAP3K12Q12852 859 aa20.45■□□□□ 0.86
PCDHA6-202ENST00000527624 RBM27Q9P2N5 1060 aaKnown RBP20.45■□□□□ 0.86
PCDHA6-202ENST00000527624 MINPP1Q9UNW1 487 aa20.45■□□□□ 0.86
PCDHA6-202ENST00000527624 CNPY2Q9Y2B0 182 aa20.45■□□□□ 0.86
PCDHA6-202ENST00000527624 SBF2Q86WG5 1849 aa20.45■□□□□ 0.86
PCDHA6-202ENST00000527624 LAMA4Q16363 1823 aa20.44■□□□□ 0.86
PCDHA6-202ENST00000527624 C4BP0C0L5 1744 aa20.44■□□□□ 0.86
PCDHA6-202ENST00000527624 AIDAQ96BJ3 306 aa20.44■□□□□ 0.86
PCDHA6-202ENST00000527624 NAP1L2Q9ULW6 460 aaPredicted RBP20.44■□□□□ 0.86
PCDHA6-202ENST00000527624 ZNF213O14771 459 aa20.43■□□□□ 0.86
PCDHA6-202ENST00000527624 SCRN1Q12765 414 aa20.43■□□□□ 0.86
PCDHA6-202ENST00000527624 USP48Q86UV5 1035 aa20.43■□□□□ 0.86
PCDHA6-202ENST00000527624 FBXO41Q8TF61 875 aa20.43■□□□□ 0.86
PCDHA6-202ENST00000527624 TAF1LQ8IZX4 1826 aa20.43■□□□□ 0.86
PCDHA6-202ENST00000527624 CDC37L1Q7L3B6 337 aa20.43■□□□□ 0.86
PCDHA6-202ENST00000527624 GPHNQ9NQX3 736 aaPredicted RBP20.43■□□□□ 0.86
PCDHA6-202ENST00000527624 NASPP49321 788 aaPredicted RBP20.42■□□□□ 0.86
PCDHA6-202ENST00000527624 RPS8P62241 208 aaKnown RBP20.42■□□□□ 0.86
PCDHA6-202ENST00000527624 STRBPQ96SI9 672 aaKnown RBP20.42■□□□□ 0.86
PCDHA6-202ENST00000527624 AGXT2Q9BYV1 514 aa20.42■□□□□ 0.86
PCDHA6-202ENST00000527624 GADD45BO75293 160 aaPredicted RBP20.42■□□□□ 0.86
PCDHA6-202ENST00000527624 MBD4O95243 580 aa20.42■□□□□ 0.86
PCDHA6-202ENST00000527624 FERMT3Q86UX7 667 aa20.42■□□□□ 0.86
PCDHA6-202ENST00000527624 DDX11Q96FC9 970 aa20.42■□□□□ 0.86
PCDHA6-202ENST00000527624 LRP2BPQ9P2M1 347 aa20.42■□□□□ 0.86
PCDHA6-202ENST00000527624 ATP6V1DQ9Y5K8 247 aa20.42■□□□□ 0.86
PCDHA6-202ENST00000527624 PFKFB2O60825 505 aa20.41■□□□□ 0.86
PCDHA6-202ENST00000527624 PDCP20941 246 aa20.41■□□□□ 0.86
PCDHA6-202ENST00000527624 CCT2P78371 535 aaKnown RBP20.41■□□□□ 0.86
PCDHA6-202ENST00000527624 UBE4AQ14139 1066 aa20.41■□□□□ 0.86
PCDHA6-202ENST00000527624 NBPF3Q9H094 633 aa20.41■□□□□ 0.86
PCDHA6-202ENST00000527624 ARMT1Q9H993 441 aa20.41■□□□□ 0.86
PCDHA6-202ENST00000527624 COL24A1Q17RW2 1714 aa20.41■□□□□ 0.86
PCDHA6-202ENST00000527624 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.41■□□□□ 0.86
PCDHA6-202ENST00000527624 NFIXQ14938 502 aa20.41■□□□□ 0.86
PCDHA6-202ENST00000527624 TPRNQ4KMQ1 711 aa20.41■□□□□ 0.86
PCDHA6-202ENST00000527624 ZNF804BA4D1E1 1349 aa20.4■□□□□ 0.86
PCDHA6-202ENST00000527624 FIBPO43427 364 aa20.4■□□□□ 0.86
PCDHA6-202ENST00000527624 TRIM37O94972 964 aa20.4■□□□□ 0.86
PCDHA6-202ENST00000527624 KLRK1P26718 216 aa20.4■□□□□ 0.86
PCDHA6-202ENST00000527624 DNM1Q05193 864 aaKnown RBP20.4■□□□□ 0.86
PCDHA6-202ENST00000527624 RALYLQ86SE5 291 aaKnown RBP20.4■□□□□ 0.86
PCDHA6-202ENST00000527624 VPS37DQ86XT2 251 aa20.4■□□□□ 0.86
PCDHA6-202ENST00000527624 TBC1D10CQ8IV04 446 aa20.4■□□□□ 0.86
PCDHA6-202ENST00000527624 MB21D2Q8IYB1 491 aaPredicted RBP20.4■□□□□ 0.86
PCDHA6-202ENST00000527624 NCOA5Q9HCD5 579 aaKnown RBP20.4■□□□□ 0.86
PCDHA6-202ENST00000527624 ABCF2Q9UG63 623 aa20.4■□□□□ 0.86
PCDHA6-202ENST00000527624 CASZ1Q86V15 1759 aa20.4■□□□□ 0.86
PCDHA6-202ENST00000527624 PRC1O43663 620 aa20.39■□□□□ 0.86
PCDHA6-202ENST00000527624 MBD3O95983 291 aa20.39■□□□□ 0.86
PCDHA6-202ENST00000527624 NCOA7Q8NI08 942 aa20.39■□□□□ 0.86
PCDHA6-202ENST00000527624 TMEM63CQ9P1W3 806 aa20.39■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms