RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 ARHGEF25Q86VW2 580 aa7.45□□□□□ -1.22
CTNNA1-239ENST00000523685 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.45□□□□□ -1.22
CTNNA1-239ENST00000523685 KCNH5Q8NCM2 988 aa7.45□□□□□ -1.22
CTNNA1-239ENST00000523685 RNF217Q8TC41 542 aa7.45□□□□□ -1.22
CTNNA1-239ENST00000523685 COL26A1Q96A83 441 aa7.45□□□□□ -1.22
CTNNA1-239ENST00000523685 ACSBG1Q96GR2 724 aa7.45□□□□□ -1.22
CTNNA1-239ENST00000523685 SIN3AQ96ST3 1273 aa7.45□□□□□ -1.22
CTNNA1-239ENST00000523685 MKNK1Q9BUB5 465 aa7.45□□□□□ -1.22
CTNNA1-239ENST00000523685 LRRC37A3O60309 1634 aa7.45□□□□□ -1.22
CTNNA1-239ENST00000523685 CPSF1Q10570 1443 aaKnown RBP7.44□□□□□ -1.22
CTNNA1-239ENST00000523685 KIAA1210Q9ULL0 1709 aa7.44□□□□□ -1.22
CTNNA1-239ENST00000523685 SLIT3O75094 1523 aa7.44□□□□□ -1.22
CTNNA1-239ENST00000523685 SPATA31C2B4DYI2 1134 aa7.44□□□□□ -1.22
CTNNA1-239ENST00000523685 LYSMD3Q7Z3D4 306 aa7.44□□□□□ -1.22
CTNNA1-239ENST00000523685 PRICKLE2Q7Z3G6 844 aa7.44□□□□□ -1.22
CTNNA1-239ENST00000523685 ZNF295-AS1Q8N0V1 137 aa7.44□□□□□ -1.22
CTNNA1-239ENST00000523685 CARD10Q9BWT7 1032 aa7.44□□□□□ -1.22
CTNNA1-239ENST00000523685 ATP13A2Q9NQ11 1180 aa7.44□□□□□ -1.22
CTNNA1-239ENST00000523685 NLRP2Q9NX02 1062 aa7.44□□□□□ -1.22
CTNNA1-239ENST00000523685 ZNF232Q9UNY5 417 aa7.44□□□□□ -1.22
CTNNA1-239ENST00000523685 IVNS1ABPQ9Y6Y0 642 aa7.44□□□□□ -1.22
CTNNA1-239ENST00000523685 QRICH2Q9H0J4 1663 aa7.44□□□□□ -1.22
CTNNA1-239ENST00000523685 ROCK2O75116 1388 aaKnown RBP7.44□□□□□ -1.22
CTNNA1-239ENST00000523685 KTN1Q86UP2 1357 aaKnown RBP7.44□□□□□ -1.22
CTNNA1-239ENST00000523685 FIGNL2A6NMB9 653 aa7.43□□□□□ -1.22
CTNNA1-239ENST00000523685 POU4F2Q12837 409 aa7.43□□□□□ -1.22
CTNNA1-239ENST00000523685 SLC15A2Q16348 729 aa7.43□□□□□ -1.22
CTNNA1-239ENST00000523685 C4orf17Q53FE4 359 aa7.43□□□□□ -1.22
CTNNA1-239ENST00000523685 CAPN12Q6ZSI9 719 aa7.43□□□□□ -1.22
CTNNA1-239ENST00000523685 TMC1Q8TDI8 760 aa7.43□□□□□ -1.22
CTNNA1-239ENST00000523685 ZDHHC1Q8WTX9 485 aa7.43□□□□□ -1.22
CTNNA1-239ENST00000523685 GZF1Q9H116 711 aaPredicted RBP7.43□□□□□ -1.22
CTNNA1-239ENST00000523685 PARP3Q9Y6F1 533 aa7.43□□□□□ -1.22
CTNNA1-239ENST00000523685 PEAK1Q9H792 1746 aa7.43□□□□□ -1.22
CTNNA1-239ENST00000523685 PIK3C2AO00443 1686 aa7.42□□□□□ -1.22
CTNNA1-239ENST00000523685 EML1O00423 815 aa7.42□□□□□ -1.22
CTNNA1-239ENST00000523685 WDR44Q5JSH3 913 aa7.42□□□□□ -1.22
CTNNA1-239ENST00000523685 NME9Q86XW9 330 aa7.42□□□□□ -1.22
CTNNA1-239ENST00000523685 SEPT3Q9UH03 358 aa7.42□□□□□ -1.22
CTNNA1-239ENST00000523685 DACH1Q9UI36 760 aa7.42□□□□□ -1.22
CTNNA1-239ENST00000523685 TTC21AQ8NDW8 1320 aa7.42□□□□□ -1.22
CTNNA1-239ENST00000523685 PHKA2P46019 1235 aa7.41□□□□□ -1.22
CTNNA1-239ENST00000523685 PLA2G4AP47712 749 aa7.41□□□□□ -1.22
CTNNA1-239ENST00000523685 HIRAP54198 1017 aaPredicted RBP7.41□□□□□ -1.22
CTNNA1-239ENST00000523685 NAA30Q147X3 362 aaPredicted RBP7.41□□□□□ -1.22
CTNNA1-239ENST00000523685 NBPF10Q6P3W6 841 aaKnown RBP7.41□□□□□ -1.22
CTNNA1-239ENST00000523685 SYT17Q9BSW7 474 aa7.41□□□□□ -1.22
CTNNA1-239ENST00000523685 MTFR1LQ9H019 292 aa7.41□□□□□ -1.22
CTNNA1-239ENST00000523685 HCN4Q9Y3Q4 1203 aa7.41□□□□□ -1.22
CTNNA1-239ENST00000523685 CCDC7Q96M83 1385 aa7.41□□□□□ -1.22
CTNNA1-239ENST00000523685 COL18A1P39060 1754 aa7.41□□□□□ -1.22
CTNNA1-239ENST00000523685 IL2RBP14784 551 aa7.4□□□□□ -1.22
CTNNA1-239ENST00000523685 SERPINB4P48594 390 aa7.4□□□□□ -1.22
CTNNA1-239ENST00000523685 SH3PXD2AQ5TCZ1 1133 aa7.4□□□□□ -1.22
CTNNA1-239ENST00000523685 DDX54Q8TDD1 881 aaKnown RBP7.4□□□□□ -1.22
CTNNA1-239ENST00000523685 ANKRD24Q8TF21 1146 aa7.4□□□□□ -1.22
CTNNA1-239ENST00000523685 GTF3C2Q8WUA4 911 aaPredicted RBP7.4□□□□□ -1.22
CTNNA1-239ENST00000523685 AIDAQ96BJ3 306 aa7.4□□□□□ -1.22
CTNNA1-239ENST00000523685 LTV1Q96GA3 475 aaPredicted RBP7.4□□□□□ -1.22
CTNNA1-239ENST00000523685 TNS2Q63HR2 1409 aa7.4□□□□□ -1.22
CTNNA1-239ENST00000523685 SBF2Q86WG5 1849 aa7.39□□□□□ -1.23
CTNNA1-239ENST00000523685 CASZ1Q86V15 1759 aa7.39□□□□□ -1.23
CTNNA1-239ENST00000523685 MYOM1P52179 1685 aa7.39□□□□□ -1.23
CTNNA1-239ENST00000523685 TRPM1Q7Z4N2 1603 aa7.39□□□□□ -1.23
CTNNA1-239ENST00000523685 NFAT5O94916 1531 aa7.39□□□□□ -1.23
CTNNA1-239ENST00000523685 BCL9O00512 1426 aa7.39□□□□□ -1.23
CTNNA1-239ENST00000523685 MAN1A2O60476 641 aa7.39□□□□□ -1.23
CTNNA1-239ENST00000523685 ABL1P00519 1130 aa7.39□□□□□ -1.23
CTNNA1-239ENST00000523685 RHOQP17081 205 aa7.39□□□□□ -1.23
CTNNA1-239ENST00000523685 ZNF827Q17R98 1081 aa7.39□□□□□ -1.23
CTNNA1-239ENST00000523685 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.39□□□□□ -1.233e-8■■■■□ 25.8
CTNNA1-239ENST00000523685 HDGFL2Q7Z4V5 671 aaPredicted RBP7.39□□□□□ -1.23
CTNNA1-239ENST00000523685 ALDH16A1Q8IZ83 802 aa7.39□□□□□ -1.23
CTNNA1-239ENST00000523685 SYTL4Q96C24 671 aaPredicted RBP7.39□□□□□ -1.23
CTNNA1-239ENST00000523685 CARD11Q9BXL7 1154 aa7.39□□□□□ -1.23
CTNNA1-239ENST00000523685 SLC12A5Q9H2X9 1139 aa7.39□□□□□ -1.23
CTNNA1-239ENST00000523685 SENP2Q9HC62 589 aa7.39□□□□□ -1.23
CTNNA1-239ENST00000523685 EGFL7Q9UHF1 273 aa7.39□□□□□ -1.23
CTNNA1-239ENST00000523685 DNMT3LQ9UJW3 386 aa7.39□□□□□ -1.23
CTNNA1-239ENST00000523685 TXLNAP40222 546 aa7.38□□□□□ -1.23
CTNNA1-239ENST00000523685 KCNQ4P56696 695 aa7.38□□□□□ -1.23
CTNNA1-239ENST00000523685 GPR162Q16538 588 aa7.38□□□□□ -1.23
CTNNA1-239ENST00000523685 C1orf53Q5VUE5 145 aa7.38□□□□□ -1.23
CTNNA1-239ENST00000523685 C16orf46Q6P387 395 aa7.38□□□□□ -1.23
CTNNA1-239ENST00000523685 Q6ZNB5 142 aa7.38□□□□□ -1.23
CTNNA1-239ENST00000523685 KIFC2Q96AC6 838 aa7.38□□□□□ -1.23
CTNNA1-239ENST00000523685 PHACTR1Q9C0D0 580 aa7.38□□□□□ -1.23
CTNNA1-239ENST00000523685 TIMMDC1Q9NPL8 285 aa7.38□□□□□ -1.23
CTNNA1-239ENST00000523685 DNMT3AQ9Y6K1 912 aaPredicted RBP7.38□□□□□ -1.23
CTNNA1-239ENST00000523685 RGPD3A6NKT7 1758 aaPredicted RBP7.38□□□□□ -1.23
CTNNA1-239ENST00000523685 AKAP12Q02952 1782 aa7.38□□□□□ -1.23
CTNNA1-239ENST00000523685 RGPD4Q7Z3J3 1758 aa7.38□□□□□ -1.23
CTNNA1-239ENST00000523685 RGPD5Q99666 1765 aa7.38□□□□□ -1.23
CTNNA1-239ENST00000523685 WNK3Q9BYP7 1800 aa7.37□□□□□ -1.23
CTNNA1-239ENST00000523685 SENP3-EIF4A1A0A087X0R7 540 aa7.37□□□□□ -1.23
CTNNA1-239ENST00000523685 FKBP4Q02790 459 aaKnown RBP eCLIP7.37□□□□□ -1.23
CTNNA1-239ENST00000523685 COX20Q5RI15 118 aa7.37□□□□□ -1.23
CTNNA1-239ENST00000523685 MYO19Q96H55 970 aa7.37□□□□□ -1.23
CTNNA1-239ENST00000523685 SAP130Q9H0E3 1048 aa7.37□□□□□ -1.23
CTNNA1-239ENST00000523685 LRRC4BQ9NT99 713 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms