RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 CEMIPQ8WUJ3 1361 aa8.87□□□□□ -0.99
HDAC3-216ENST00000523088 N4BP2Q86UW6 1770 aaPredicted RBP8.87□□□□□ -0.99
HDAC3-216ENST00000523088 A0A087WZG4 1122 aa8.87□□□□□ -0.99
HDAC3-216ENST00000523088 HTATSF1O43719 755 aaKnown RBP8.87□□□□□ -0.99
HDAC3-216ENST00000523088 CCDC159P0C7I6 412 aa8.87□□□□□ -0.99
HDAC3-216ENST00000523088 GYS1P13807 737 aa8.87□□□□□ -0.99
HDAC3-216ENST00000523088 PPP2R1AP30153 589 aa8.87□□□□□ -0.99
HDAC3-216ENST00000523088 MAN1A1P33908 653 aa8.87□□□□□ -0.99
HDAC3-216ENST00000523088 BMS1Q14692 1282 aaKnown RBP8.87□□□□□ -0.99
HDAC3-216ENST00000523088 LARP1BQ659C4 914 aaKnown RBP8.87□□□□□ -0.99
HDAC3-216ENST00000523088 AMIGO3Q86WK7 504 aa8.87□□□□□ -0.99
HDAC3-216ENST00000523088 FMNL3Q8IVF7 1028 aa8.87□□□□□ -0.99
HDAC3-216ENST00000523088 RTF1Q92541 710 aaKnown RBP8.87□□□□□ -0.99
HDAC3-216ENST00000523088 CCDC47Q96A33 483 aaKnown RBP8.87□□□□□ -0.99
HDAC3-216ENST00000523088 CEP63Q96MT8 703 aa8.87□□□□□ -0.99
HDAC3-216ENST00000523088 FEZ1Q99689 392 aa8.87□□□□□ -0.99
HDAC3-216ENST00000523088 AKAP2Q9Y2D5 859 aa8.87□□□□□ -0.99
HDAC3-216ENST00000523088 PCDHGA4Q9Y5G9 962 aa8.87□□□□□ -0.99
HDAC3-216ENST00000523088 PXDNLA1KZ92 1463 aa8.87□□□□□ -0.99
HDAC3-216ENST00000523088 SCN7AQ01118 1682 aa8.87□□□□□ -0.99
HDAC3-216ENST00000523088 COL15A1P39059 1388 aa8.86□□□□□ -0.99
HDAC3-216ENST00000523088 DLEC1Q9Y238 1755 aa8.86□□□□□ -0.99
HDAC3-216ENST00000523088 SOS1Q07889 1333 aaPredicted RBP8.86□□□□□ -0.99
HDAC3-216ENST00000523088 NRXN2Q9P2S2 1712 aa8.86□□□□□ -0.99
HDAC3-216ENST00000523088 TMCO5BA8MYB1 307 aa8.86□□□□□ -0.99
HDAC3-216ENST00000523088 FOSL1P15407 271 aa8.86□□□□□ -0.99
HDAC3-216ENST00000523088 YBX3P16989 372 aaKnown RBP eCLIP8.86□□□□□ -0.993e-8■■□□□ 12.1
HDAC3-216ENST00000523088 PRKAR2BP31323 418 aa8.86□□□□□ -0.99
HDAC3-216ENST00000523088 ZNF790Q6PG37 636 aa8.86□□□□□ -0.99
HDAC3-216ENST00000523088 DRC7Q8IY82 874 aa8.86□□□□□ -0.99
HDAC3-216ENST00000523088 TDRD7Q8NHU6 1098 aaKnown RBP8.86□□□□□ -0.99
HDAC3-216ENST00000523088 RBM46Q8TBY0 533 aaKnown RBP8.86□□□□□ -0.99
HDAC3-216ENST00000523088 FMNL2Q96PY5 1086 aa8.86□□□□□ -0.99
HDAC3-216ENST00000523088 PAGR1Q9BTK6 254 aa8.86□□□□□ -0.99
HDAC3-216ENST00000523088 VEZTQ9HBM0 779 aa8.86□□□□□ -0.99
HDAC3-216ENST00000523088 LGR6Q9HBX8 967 aa8.86□□□□□ -0.99
HDAC3-216ENST00000523088 AFDNP55196 1824 aaKnown RBP8.86□□□□□ -0.99
HDAC3-216ENST00000523088 LAMB4A4D0S4 1761 aa8.86□□□□□ -0.99
HDAC3-216ENST00000523088 DLG5Q8TDM6 1919 aa8.86□□□□□ -0.99
HDAC3-216ENST00000523088 HEG1Q9ULI3 1381 aa8.86□□□□□ -0.99
HDAC3-216ENST00000523088 GIGYF1O75420 1035 aaPredicted RBP8.85□□□□□ -0.99
HDAC3-216ENST00000523088 U2AF1L5P0DN76 240 aaPredicted RBP8.85□□□□□ -0.99
HDAC3-216ENST00000523088 CYP19A1P11511 503 aaPredicted RBP8.85□□□□□ -0.99
HDAC3-216ENST00000523088 U2AF1Q01081 240 aaKnown RBP eCLIP8.85□□□□□ -0.99
HDAC3-216ENST00000523088 TAF7Q15545 349 aaPredicted RBP8.85□□□□□ -0.99
HDAC3-216ENST00000523088 INTS5Q6P9B9 1019 aaKnown RBP8.85□□□□□ -0.99
HDAC3-216ENST00000523088 CCDC174Q6PII3 467 aa8.85□□□□□ -0.99
HDAC3-216ENST00000523088 ANKRD13DQ6ZTN6 518 aa8.85□□□□□ -0.99
HDAC3-216ENST00000523088 ZNF771Q7L3S4 317 aaPredicted RBP8.85□□□□□ -0.99
HDAC3-216ENST00000523088 UBE2Q1Q7Z7E8 422 aa8.85□□□□□ -0.99
HDAC3-216ENST00000523088 DNAJC10Q8IXB1 793 aa8.85□□□□□ -0.99
HDAC3-216ENST00000523088 CCDC191Q8NCU4 936 aa8.85□□□□□ -0.99
HDAC3-216ENST00000523088 KIF2CQ99661 725 aa8.85□□□□□ -0.99
HDAC3-216ENST00000523088 TRPV5Q9NQA5 729 aa8.85□□□□□ -0.99
HDAC3-216ENST00000523088 NARFQ9UHQ1 456 aa8.85□□□□□ -0.99
HDAC3-216ENST00000523088 ZNF232Q9UNY5 417 aa8.85□□□□□ -0.99
HDAC3-216ENST00000523088 ADCY9O60503 1353 aa8.85□□□□□ -0.99
HDAC3-216ENST00000523088 BCORQ6W2J9 1755 aa8.84□□□□□ -0.99
HDAC3-216ENST00000523088 FAM163BP0C2L3 166 aa8.84□□□□□ -0.99
HDAC3-216ENST00000523088 RPL17P18621 184 aaKnown RBP8.84□□□□□ -0.99
HDAC3-216ENST00000523088 IL6STP40189 918 aaPredicted RBP8.84□□□□□ -0.99
HDAC3-216ENST00000523088 MFSD4BQ5TF39 518 aa8.84□□□□□ -0.99
HDAC3-216ENST00000523088 NFXL1Q6ZNB6 911 aa8.84□□□□□ -0.99
HDAC3-216ENST00000523088 HSCBQ8IWL3 235 aa8.84□□□□□ -0.99
HDAC3-216ENST00000523088 LMNTD2Q8IXW0 634 aa8.84□□□□□ -0.99
HDAC3-216ENST00000523088 TTC30BQ8N4P2 665 aa8.84□□□□□ -0.99
HDAC3-216ENST00000523088 ENOX1Q8TC92 643 aaKnown RBP8.84□□□□□ -0.99
HDAC3-216ENST00000523088 RMI1Q9H9A7 625 aa8.84□□□□□ -0.99
HDAC3-216ENST00000523088 ETAA1Q9NY74 926 aa8.84□□□□□ -0.99
HDAC3-216ENST00000523088 KIAA1522Q9P206 1035 aaPredicted RBP8.84□□□□□ -0.99
HDAC3-216ENST00000523088 ATP10DQ9P241 1426 aa8.83□□□□□ -1
HDAC3-216ENST00000523088 BTBD11A6QL63 1104 aa8.83□□□□□ -1
HDAC3-216ENST00000523088 MRE11P49959 708 aa8.83□□□□□ -1
HDAC3-216ENST00000523088 IGBP1P78318 339 aa8.83□□□□□ -1
HDAC3-216ENST00000523088 SLC39A6Q13433 755 aa8.83□□□□□ -1
HDAC3-216ENST00000523088 PDCD2Q16342 344 aaPredicted RBP8.83□□□□□ -1
HDAC3-216ENST00000523088 CCDC184Q52MB2 194 aa8.83□□□□□ -1
HDAC3-216ENST00000523088 CCDC92Q53HC0 331 aaPredicted RBP8.83□□□□□ -1
HDAC3-216ENST00000523088 HS1BP3Q53T59 392 aa8.83□□□□□ -1
HDAC3-216ENST00000523088 TAX1BP1Q86VP1 789 aa8.83□□□□□ -1
HDAC3-216ENST00000523088 LCA5Q86VQ0 697 aa8.83□□□□□ -1
HDAC3-216ENST00000523088 IL17REQ8NFR9 667 aa8.83□□□□□ -1
HDAC3-216ENST00000523088 CDC5LQ99459 802 aaKnown RBP8.83□□□□□ -1
HDAC3-216ENST00000523088 MAP3K20Q9NYL2 800 aaKnown RBP8.83□□□□□ -1
HDAC3-216ENST00000523088 MAPK8IP3Q9UPT6 1336 aa8.82□□□□□ -1
HDAC3-216ENST00000523088 KDM3BQ7LBC6 1761 aa8.82□□□□□ -1
HDAC3-216ENST00000523088 KINO60870 393 aaKnown RBP8.82□□□□□ -1
HDAC3-216ENST00000523088 IGHDP01880 384 aa8.82□□□□□ -1
HDAC3-216ENST00000523088 ATXN8OSP0DMR3 200 aa8.82□□□□□ -1
HDAC3-216ENST00000523088 IMPDH2P12268 514 aa8.82□□□□□ -1
HDAC3-216ENST00000523088 VCAM1P19320 739 aa8.82□□□□□ -1
HDAC3-216ENST00000523088 ALDH1B1P30837 517 aa8.82□□□□□ -1
HDAC3-216ENST00000523088 STIP1P31948 543 aaKnown RBP8.82□□□□□ -1
HDAC3-216ENST00000523088 SESN3P58005 492 aa8.82□□□□□ -1
HDAC3-216ENST00000523088 RASSF7Q02833 373 aa8.82□□□□□ -1
HDAC3-216ENST00000523088 ADCY2Q08462 1091 aa8.82□□□□□ -1
HDAC3-216ENST00000523088 MAP9Q49MG5 647 aa8.82□□□□□ -1
HDAC3-216ENST00000523088 ZNF394Q53GI3 561 aa8.82□□□□□ -1
HDAC3-216ENST00000523088 RBM12BQ8IXT5 1001 aaKnown RBP8.82□□□□□ -1
HDAC3-216ENST00000523088 MYOCDQ8IZQ8 938 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms