RNA–Protein interactions for RNA: ENST00000522230.1

CKS1BP7-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 7, humanhuman

BASIC

Gene CKS1BP7, Length 235 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP7-201ENST00000522230 ELOA3Q8NG57 546 aa4.16□□□□□ -1.74
CKS1BP7-201ENST00000522230 WHAMMQ8TF30 809 aa4.16□□□□□ -1.74
CKS1BP7-201ENST00000522230 SRCIN1Q9C0H9 1055 aa4.16□□□□□ -1.74
CKS1BP7-201ENST00000522230 SEC31BQ9NQW1 1179 aa4.16□□□□□ -1.74
CKS1BP7-201ENST00000522230 METTL5Q9NRN9 209 aaKnown RBP4.16□□□□□ -1.74
CKS1BP7-201ENST00000522230 KBTBD4Q9NVX7 518 aa4.16□□□□□ -1.74
CKS1BP7-201ENST00000522230 NCAPD3P42695 1498 aa4.16□□□□□ -1.74
CKS1BP7-201ENST00000522230 TTBK1Q5TCY1 1321 aaPredicted RBP4.16□□□□□ -1.74
CKS1BP7-201ENST00000522230 RUSC2Q8N2Y8 1516 aa4.16□□□□□ -1.74
CKS1BP7-201ENST00000522230 SOGA1O94964 1423 aa4.15□□□□□ -1.74
CKS1BP7-201ENST00000522230 MINDY4BA8MYZ0 360 aa4.15□□□□□ -1.75
CKS1BP7-201ENST00000522230 SHISA8B8ZZ34 492 aa4.15□□□□□ -1.75
CKS1BP7-201ENST00000522230 SMNDC1O75940 238 aaKnown RBP eCLIP4.15□□□□□ -1.75
CKS1BP7-201ENST00000522230 EPHA1P21709 976 aa4.15□□□□□ -1.75
CKS1BP7-201ENST00000522230 ITPKAP23677 461 aa4.15□□□□□ -1.75
CKS1BP7-201ENST00000522230 ST13P50502 369 aaKnown RBP4.15□□□□□ -1.75
CKS1BP7-201ENST00000522230 ZNF423Q2M1K9 1284 aa4.15□□□□□ -1.75
CKS1BP7-201ENST00000522230 SLCO4C1Q6ZQN7 724 aa4.15□□□□□ -1.75
CKS1BP7-201ENST00000522230 HS2ST1Q7LGA3 356 aa4.15□□□□□ -1.75
CKS1BP7-201ENST00000522230 VN1R5Q7Z5H4 357 aa4.15□□□□□ -1.75
CKS1BP7-201ENST00000522230 STK35Q8TDR2 534 aa4.15□□□□□ -1.75
CKS1BP7-201ENST00000522230 SLC16A10Q8TF71 515 aa4.15□□□□□ -1.75
CKS1BP7-201ENST00000522230 RBSNQ9H1K0 784 aa4.15□□□□□ -1.75
CKS1BP7-201ENST00000522230 CCSER2Q9H7U1 834 aa4.15□□□□□ -1.75
CKS1BP7-201ENST00000522230 CAPN10Q9HC96 672 aa4.15□□□□□ -1.75
CKS1BP7-201ENST00000522230 SRA1Q9HD15 236 aaKnown RBP4.15□□□□□ -1.75
CKS1BP7-201ENST00000522230 JPH1Q9HDC5 661 aaPredicted RBP4.15□□□□□ -1.75
CKS1BP7-201ENST00000522230 AVENQ9NQS1 362 aaPredicted RBP4.15□□□□□ -1.75
CKS1BP7-201ENST00000522230 PPP4R2Q9NY27 417 aa4.15□□□□□ -1.75
CKS1BP7-201ENST00000522230 USP35Q9P2H5 1018 aa4.15□□□□□ -1.75
CKS1BP7-201ENST00000522230 GPN3Q9UHW5 284 aaPredicted RBP4.15□□□□□ -1.75
CKS1BP7-201ENST00000522230 DDX41Q9UJV9 622 aaKnown RBP4.15□□□□□ -1.75
CKS1BP7-201ENST00000522230 SOX13Q9UN79 622 aa4.15□□□□□ -1.75
CKS1BP7-201ENST00000522230 TLR6Q9Y2C9 796 aa4.15□□□□□ -1.75
CKS1BP7-201ENST00000522230 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.15□□□□□ -1.75
CKS1BP7-201ENST00000522230 SYNJ1O43426 1573 aa4.14□□□□□ -1.75
CKS1BP7-201ENST00000522230 NESP48681 1621 aa4.14□□□□□ -1.75
CKS1BP7-201ENST00000522230 WRNQ14191 1432 aaPredicted RBP eCLIP4.14□□□□□ -1.75
CKS1BP7-201ENST00000522230 ENC1O14682 589 aa4.14□□□□□ -1.75
CKS1BP7-201ENST00000522230 RGS9O75916 674 aaPredicted RBP4.14□□□□□ -1.75
CKS1BP7-201ENST00000522230 EPXP11678 715 aa4.14□□□□□ -1.75
CKS1BP7-201ENST00000522230 PTPRAP18433 802 aa4.14□□□□□ -1.75
CKS1BP7-201ENST00000522230 ZC3H6P61129 1189 aaKnown RBP4.14□□□□□ -1.75
CKS1BP7-201ENST00000522230 PTPN12Q05209 780 aaKnown RBP4.14□□□□□ -1.75
CKS1BP7-201ENST00000522230 SRSF11Q05519 484 aaKnown RBP4.14□□□□□ -1.75
CKS1BP7-201ENST00000522230 FAM160A1Q05DH4 1040 aa4.14□□□□□ -1.75
CKS1BP7-201ENST00000522230 PCDH1Q08174 1060 aa4.14□□□□□ -1.75
CKS1BP7-201ENST00000522230 GRIK5Q16478 980 aa4.14□□□□□ -1.75
CKS1BP7-201ENST00000522230 LYPD4Q6UWN0 246 aa4.14□□□□□ -1.75
CKS1BP7-201ENST00000522230 C20orf204Q6ZNR8 217 aa4.14□□□□□ -1.75
CKS1BP7-201ENST00000522230 ERMP1Q7Z2K6 904 aa4.14□□□□□ -1.75
CKS1BP7-201ENST00000522230 NPAS3Q8IXF0 933 aa4.14□□□□□ -1.75
CKS1BP7-201ENST00000522230 GOLGA6L1Q8N7Z2 621 aa4.14□□□□□ -1.75
CKS1BP7-201ENST00000522230 GALNT6Q8NCL4 622 aa4.14□□□□□ -1.75
CKS1BP7-201ENST00000522230 EDARADDQ8WWZ3 215 aa4.14□□□□□ -1.75
CKS1BP7-201ENST00000522230 BSNDQ8WZ55 320 aa4.14□□□□□ -1.75
CKS1BP7-201ENST00000522230 IRF7Q92985 503 aa4.14□□□□□ -1.75
CKS1BP7-201ENST00000522230 NECAB3Q96P71 396 aaPredicted RBP4.14□□□□□ -1.75
CKS1BP7-201ENST00000522230 TINF2Q9BSI4 451 aa4.14□□□□□ -1.75
CKS1BP7-201ENST00000522230 TGIF2Q9GZN2 237 aa4.14□□□□□ -1.75
CKS1BP7-201ENST00000522230 NSFL1CQ9UNZ2 370 aaKnown RBP4.14□□□□□ -1.75
CKS1BP7-201ENST00000522230 HMGXB3Q12766 1538 aa4.14□□□□□ -1.75
CKS1BP7-201ENST00000522230 M0R082 166 aa4.13□□□□□ -1.75
CKS1BP7-201ENST00000522230 ESRRAP11474 423 aaPredicted RBP4.13□□□□□ -1.75
CKS1BP7-201ENST00000522230 CDC27P30260 824 aa4.13□□□□□ -1.75
CKS1BP7-201ENST00000522230 GBP2P32456 591 aaPredicted RBP4.13□□□□□ -1.75
CKS1BP7-201ENST00000522230 ITGAEP38570 1179 aa4.13□□□□□ -1.75
CKS1BP7-201ENST00000522230 BAG6P46379 1132 aa4.13□□□□□ -1.75
CKS1BP7-201ENST00000522230 PCSK7Q16549 785 aa4.13□□□□□ -1.75
CKS1BP7-201ENST00000522230 MPRIPQ6WCQ1 1025 aa4.13□□□□□ -1.75
CKS1BP7-201ENST00000522230 CHSY3Q70JA7 882 aa4.13□□□□□ -1.75
CKS1BP7-201ENST00000522230 ZNF417Q8TAU3 575 aa4.13□□□□□ -1.75
CKS1BP7-201ENST00000522230 SLC7A3Q8WY07 619 aa4.13□□□□□ -1.75
CKS1BP7-201ENST00000522230 ZNF587Q96SQ5 575 aaPredicted RBP4.13□□□□□ -1.75
CKS1BP7-201ENST00000522230 CARD10Q9BWT7 1032 aa4.13□□□□□ -1.75
CKS1BP7-201ENST00000522230 ADAM19Q9H013 955 aa4.13□□□□□ -1.75
CKS1BP7-201ENST00000522230 CLEC4MQ9H2X3 399 aaPredicted RBP4.13□□□□□ -1.75
CKS1BP7-201ENST00000522230 PPP1R1BQ9UD71 204 aaPredicted RBP4.13□□□□□ -1.75
CKS1BP7-201ENST00000522230 ADAMTS1Q9UHI8 967 aa4.13□□□□□ -1.75
CKS1BP7-201ENST00000522230 GDF2Q9UK05 429 aaPredicted RBP4.13□□□□□ -1.75
CKS1BP7-201ENST00000522230 PCDHB5Q9Y5E4 795 aa4.13□□□□□ -1.75
CKS1BP7-201ENST00000522230 LINC01387J3KSC0 135 aa4.12□□□□□ -1.75
CKS1BP7-201ENST00000522230 SOX1O00570 391 aaPredicted RBP4.12□□□□□ -1.75
CKS1BP7-201ENST00000522230 ECEL1O95672 775 aa4.12□□□□□ -1.75
CKS1BP7-201ENST00000522230 PF4P02776 101 aa4.12□□□□□ -1.75
CKS1BP7-201ENST00000522230 CELA2BP08218 269 aaPredicted RBP4.12□□□□□ -1.75
CKS1BP7-201ENST00000522230 XRCC5P13010 732 aaKnown RBP4.12□□□□□ -1.75
CKS1BP7-201ENST00000522230 TFE3P19532 575 aaPredicted RBP4.12□□□□□ -1.75
CKS1BP7-201ENST00000522230 ALAS2P22557 587 aa4.12□□□□□ -1.75
CKS1BP7-201ENST00000522230 AMPD1P23109 780 aa4.12□□□□□ -1.75
CKS1BP7-201ENST00000522230 LIG3P49916 1009 aa4.12□□□□□ -1.75
CKS1BP7-201ENST00000522230 AFF1P51825 1210 aaKnown RBP4.12□□□□□ -1.75
CKS1BP7-201ENST00000522230 PAK2Q13177 524 aa4.12□□□□□ -1.75
CKS1BP7-201ENST00000522230 PCNX4Q63HM2 1172 aa4.12□□□□□ -1.75
CKS1BP7-201ENST00000522230 TTBK2Q6IQ55 1244 aa4.12□□□□□ -1.75
CKS1BP7-201ENST00000522230 ZNF654Q8IZM8 581 aa4.12□□□□□ -1.75
CKS1BP7-201ENST00000522230 IL22RA1Q8N6P7 574 aa4.12□□□□□ -1.75
CKS1BP7-201ENST00000522230 PHC3Q8NDX5 983 aa4.12□□□□□ -1.75
CKS1BP7-201ENST00000522230 GRIN3AQ8TCU5 1115 aa4.12□□□□□ -1.75
CKS1BP7-201ENST00000522230 ZNF775Q96BV0 537 aaPredicted RBP4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms