RNA–Protein interactions for RNA: ENST00000520580.5

SREK1-208, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 2

Gene SREK1, Length 2,369 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-208	ENST00000520580	PLEKHD1	A6NEE1	506 aa		4.97	□□□□□ -1.61
SREK1-208	ENST00000520580		B2RBV5	119 aa		4.97	□□□□□ -1.61
SREK1-208	ENST00000520580		J3QL48	77 aa		4.97	□□□□□ -1.61
SREK1-208	ENST00000520580	MMP20	O60882	483 aa		4.97	□□□□□ -1.61
SREK1-208	ENST00000520580	RHOQ	P17081	205 aa		4.97	□□□□□ -1.61
SREK1-208	ENST00000520580	C16orf86	Q6ZW13	317 aa		4.97	□□□□□ -1.61
SREK1-208	ENST00000520580	SV2B	Q7L1I2	683 aa		4.97	□□□□□ -1.61
SREK1-208	ENST00000520580	JAML	Q86YT9	394 aa		4.97	□□□□□ -1.61
SREK1-208	ENST00000520580	HHIP	Q96QV1	700 aa		4.97	□□□□□ -1.61
SREK1-208	ENST00000520580	TCF12	Q99081	682 aa		4.97	□□□□□ -1.61
SREK1-208	ENST00000520580	FEZ1	Q99689	392 aa		4.97	□□□□□ -1.61
SREK1-208	ENST00000520580	CCDC113	Q9H0I3	377 aa		4.97	□□□□□ -1.61
SREK1-208	ENST00000520580	CD2AP	Q9Y5K6	639 aa		4.97	□□□□□ -1.61
SREK1-208	ENST00000520580	KDM2B	Q8NHM5	1336 aa		4.97	□□□□□ -1.61
SREK1-208	ENST00000520580		A0A1W2PNR3	127 aa		4.97	□□□□□ -1.61
SREK1-208	ENST00000520580	DIAPH1	O60610	1272 aa	Known RBP	4.97	□□□□□ -1.61
SREK1-208	ENST00000520580	DDAH1	O94760	285 aa		4.97	□□□□□ -1.61
SREK1-208	ENST00000520580	ASMTL	O95671	621 aa		4.97	□□□□□ -1.61
SREK1-208	ENST00000520580	CNGA1	P29973	690 aa		4.97	□□□□□ -1.61
SREK1-208	ENST00000520580	LMNB2	Q03252	620 aa		4.97	□□□□□ -1.61
SREK1-208	ENST00000520580	SPRED3	Q2MJR0	410 aa		4.97	□□□□□ -1.61
SREK1-208	ENST00000520580	ARSH	Q5FYA8	562 aa		4.97	□□□□□ -1.61
SREK1-208	ENST00000520580	SLITRK4	Q8IW52	837 aa		4.97	□□□□□ -1.61
SREK1-208	ENST00000520580	RAVER1	Q8IY67	606 aa	Known RBP	4.97	□□□□□ -1.61
SREK1-208	ENST00000520580	CNTNAP3B	Q96NU0	1288 aa		4.97	□□□□□ -1.61
SREK1-208	ENST00000520580	OSMR	Q99650	979 aa		4.97	□□□□□ -1.61
SREK1-208	ENST00000520580	CNTNAP3	Q9BZ76	1288 aa		4.97	□□□□□ -1.61
SREK1-208	ENST00000520580	GJB6	O95452	261 aa		4.96	□□□□□ -1.62
SREK1-208	ENST00000520580	LMNB1	P20700	586 aa		4.96	□□□□□ -1.62
SREK1-208	ENST00000520580	GPC1	P35052	558 aa		4.96	□□□□□ -1.62
SREK1-208	ENST00000520580	RNF144A	P50876	292 aa	Predicted RBP	4.96	□□□□□ -1.62
SREK1-208	ENST00000520580	AGMO	Q6ZNB7	445 aa		4.96	□□□□□ -1.62
SREK1-208	ENST00000520580	RUFY4	Q6ZNE9	571 aa		4.96	□□□□□ -1.62
SREK1-208	ENST00000520580	LRP10	Q7Z4F1	713 aa		4.96	□□□□□ -1.62
SREK1-208	ENST00000520580	TRIM42	Q8IWZ5	723 aa		4.96	□□□□□ -1.62
SREK1-208	ENST00000520580	PRPF38A	Q8NAV1	312 aa	Known RBP	4.96	□□□□□ -1.62
SREK1-208	ENST00000520580	ASAP3	Q8TDY4	903 aa		4.96	□□□□□ -1.62
SREK1-208	ENST00000520580	RUBCNL	Q9H714	662 aa		4.96	□□□□□ -1.62
SREK1-208	ENST00000520580	GPN3	Q9UHW5	284 aa	Predicted RBP	4.96	□□□□□ -1.62
SREK1-208	ENST00000520580	GIPR	P48546	466 aa		4.96	□□□□□ -1.62
SREK1-208	ENST00000520580	CDKN1C	P49918	316 aa	Predicted RBP	4.96	□□□□□ -1.62
SREK1-208	ENST00000520580	FAM50A	Q14320	339 aa	Known RBP	4.96	□□□□□ -1.62
SREK1-208	ENST00000520580	GORAB	Q5T7V8	394 aa		4.96	□□□□□ -1.62
SREK1-208	ENST00000520580	COL13A1	Q5TAT6	717 aa	Predicted RBP	4.96	□□□□□ -1.62
SREK1-208	ENST00000520580	CCDC146	Q8IYE0	955 aa		4.96	□□□□□ -1.62
SREK1-208	ENST00000520580	SGSM3	Q96HU1	749 aa		4.96	□□□□□ -1.62
SREK1-208	ENST00000520580	BRMS1	Q9HCU9	246 aa		4.96	□□□□□ -1.62
SREK1-208	ENST00000520580	RARA	P10276	462 aa		4.95	□□□□□ -1.62
SREK1-208	ENST00000520580	RASGRF1	Q13972	1273 aa		4.95	□□□□□ -1.62
SREK1-208	ENST00000520580	C2orf27A	Q580R0	203 aa		4.95	□□□□□ -1.62
SREK1-208	ENST00000520580	RASIP1	Q5U651	963 aa		4.95	□□□□□ -1.62
SREK1-208	ENST00000520580	C6orf15	Q6UXA7	325 aa	Predicted RBP	4.95	□□□□□ -1.62
SREK1-208	ENST00000520580	CCNJL	Q8IV13	435 aa		4.95	□□□□□ -1.62
SREK1-208	ENST00000520580	MEIOB	Q8N635	442 aa		4.95	□□□□□ -1.62
SREK1-208	ENST00000520580	TSR2	Q969E8	191 aa	Known RBP	4.95	□□□□□ -1.62
SREK1-208	ENST00000520580	NSUN5	Q96P11	429 aa	Known RBP	4.95	□□□□□ -1.62
SREK1-208	ENST00000520580	NECAB3	Q96P71	396 aa	Predicted RBP	4.95	□□□□□ -1.62
SREK1-208	ENST00000520580	DZANK1	Q9NVP4	752 aa		4.95	□□□□□ -1.62
SREK1-208	ENST00000520580	PTCH2	Q9Y6C5	1203 aa		4.95	□□□□□ -1.62
SREK1-208	ENST00000520580	EGFR	P00533	1210 aa		4.94	□□□□□ -1.62
SREK1-208	ENST00000520580	MSX1	P28360	303 aa		4.94	□□□□□ -1.62
SREK1-208	ENST00000520580	SLC19A1	P41440	591 aa		4.94	□□□□□ -1.62
SREK1-208	ENST00000520580	CLC	Q05315	142 aa		4.94	□□□□□ -1.62
SREK1-208	ENST00000520580	FAAP100	Q0VG06	881 aa		4.94	□□□□□ -1.62
SREK1-208	ENST00000520580	CWF19L2	Q2TBE0	894 aa	Known RBP	4.94	□□□□□ -1.62
SREK1-208	ENST00000520580	DALRD3	Q5D0E6	543 aa	Known RBP	4.94	□□□□□ -1.62
SREK1-208	ENST00000520580	TMED8	Q6PL24	325 aa	Predicted RBP	4.94	□□□□□ -1.62
SREK1-208	ENST00000520580	LSR	Q86X29	649 aa	Predicted RBP	4.94	□□□□□ -1.62
SREK1-208	ENST00000520580	UBR7	Q8N806	425 aa		4.94	□□□□□ -1.62
SREK1-208	ENST00000520580	MIR1-1HG	Q9H1L0	117 aa		4.94	□□□□□ -1.62
SREK1-208	ENST00000520580	TIMMDC1	Q9NPL8	285 aa		4.94	□□□□□ -1.62
SREK1-208	ENST00000520580	SEC31B	Q9NQW1	1179 aa		4.94	□□□□□ -1.62
SREK1-208	ENST00000520580	HOMER2	Q9NSB8	354 aa		4.94	□□□□□ -1.62
SREK1-208	ENST00000520580	ZFAT	Q9P243	1243 aa		4.94	□□□□□ -1.62
SREK1-208	ENST00000520580	THRAP3	Q9Y2W1	955 aa	Known RBP	4.94	□□□□□ -1.62
SREK1-208	ENST00000520580	GPC6	Q9Y625	555 aa	Predicted RBP	4.94	□□□□□ -1.62
SREK1-208	ENST00000520580	GRIN3B	O60391	1043 aa		4.94	□□□□□ -1.62
SREK1-208	ENST00000520580	SSRP1	Q08945	709 aa	Known RBP	4.94	□□□□□ -1.62
SREK1-208	ENST00000520580	FXN	Q16595	210 aa		4.94	□□□□□ -1.62
SREK1-208	ENST00000520580	RAB44	Q7Z6P3	723 aa	Predicted RBP	4.94	□□□□□ -1.62
SREK1-208	ENST00000520580	WDR75	Q8IWA0	830 aa	Known RBP	4.94	□□□□□ -1.62
SREK1-208	ENST00000520580	OR13H1	Q8NG92	308 aa		4.94	□□□□□ -1.62
SREK1-208	ENST00000520580	GATAD2B	Q8WXI9	593 aa		4.94	□□□□□ -1.62
SREK1-208	ENST00000520580	CEP44	Q9C0F1	390 aa		4.94	□□□□□ -1.62
SREK1-208	ENST00000520580	TTBK1	Q5TCY1	1321 aa	Predicted RBP	4.94	□□□□□ -1.62
SREK1-208	ENST00000520580	SPATA31C2	B4DYI2	1134 aa		4.93	□□□□□ -1.62
SREK1-208	ENST00000520580	IRS4	O14654	1257 aa	Predicted RBP	4.93	□□□□□ -1.62
SREK1-208	ENST00000520580	ITGBL1	O95965	494 aa	Predicted RBP	4.93	□□□□□ -1.62
SREK1-208	ENST00000520580	TBX4	P57082	545 aa		4.93	□□□□□ -1.62
SREK1-208	ENST00000520580	TCEA2	Q15560	299 aa		4.93	□□□□□ -1.62
SREK1-208	ENST00000520580	TAF7L	Q5H9L4	462 aa		4.93	□□□□□ -1.62
SREK1-208	ENST00000520580	AXDND1	Q5T1B0	1012 aa	Predicted RBP	4.93	□□□□□ -1.62
SREK1-208	ENST00000520580	C6orf118	Q5T5N4	469 aa		4.93	□□□□□ -1.62
SREK1-208	ENST00000520580	LINC00528	Q8N1L1	170 aa		4.93	□□□□□ -1.62
SREK1-208	ENST00000520580	PMM1	Q92871	262 aa		4.93	□□□□□ -1.62
SREK1-208	ENST00000520580	CEP89	Q96ST8	783 aa		4.93	□□□□□ -1.62
SREK1-208	ENST00000520580	RBSN	Q9H1K0	784 aa		4.93	□□□□□ -1.62
SREK1-208	ENST00000520580		A0A1B0GTH6	734 aa		4.93	□□□□□ -1.62
SREK1-208	ENST00000520580	TTC24	A2A3L6	582 aa	Predicted RBP	4.93	□□□□□ -1.62
SREK1-208	ENST00000520580	SPINT1	O43278	529 aa		4.93	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms