RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 MYO5BQ9ULV0 1848 aa13.03□□□□□ -0.32
PCDHGB4-201ENST00000519479 SYKP43405 635 aa13.03□□□□□ -0.32
PCDHGB4-201ENST00000519479 MTX1Q13505 466 aa13.03□□□□□ -0.32
PCDHGB4-201ENST00000519479 CATIPQ7Z7H3 387 aa13.03□□□□□ -0.32
PCDHGB4-201ENST00000519479 PPFIBP1Q86W92 1011 aa13.03□□□□□ -0.32
PCDHGB4-201ENST00000519479 DZIP1Q86YF9 867 aaKnown RBP13.03□□□□□ -0.32
PCDHGB4-201ENST00000519479 ADAMTSL3P82987 1691 aa13.03□□□□□ -0.32
PCDHGB4-201ENST00000519479 GPAA1O43292 621 aa13.03□□□□□ -0.32
PCDHGB4-201ENST00000519479 IGKV5-2P06315 115 aa13.03□□□□□ -0.32
PCDHGB4-201ENST00000519479 ZAP70P43403 619 aa13.03□□□□□ -0.32
PCDHGB4-201ENST00000519479 MAGEB6Q8N7X4 407 aa13.03□□□□□ -0.32
PCDHGB4-201ENST00000519479 PPP1R9BQ96SB3 815 aa13.03□□□□□ -0.32
PCDHGB4-201ENST00000519479 KRT23Q9C075 422 aa13.03□□□□□ -0.32
PCDHGB4-201ENST00000519479 QTRT2Q9H974 415 aaKnown RBP13.03□□□□□ -0.32
PCDHGB4-201ENST00000519479 IFT172Q9UG01 1749 aa13.02□□□□□ -0.32
PCDHGB4-201ENST00000519479 USP5P45974 858 aa13.02□□□□□ -0.32
PCDHGB4-201ENST00000519479 GTF3C6Q969F1 213 aa13.02□□□□□ -0.32
PCDHGB4-201ENST00000519479 ANKIB1Q9P2G1 1089 aa13.02□□□□□ -0.32
PCDHGB4-201ENST00000519479 KLHL10Q6JEL2 608 aa13.02□□□□□ -0.33
PCDHGB4-201ENST00000519479 CNNM2Q9H8M5 875 aa13.02□□□□□ -0.33
PCDHGB4-201ENST00000519479 ERBB4Q15303 1308 aa13.02□□□□□ -0.33
PCDHGB4-201ENST00000519479 CCDC102BQ68D86 513 aa13.02□□□□□ -0.33
PCDHGB4-201ENST00000519479 ANKRD18AQ8IVF6 992 aa13.02□□□□□ -0.33
PCDHGB4-201ENST00000519479 DSCC1Q9BVC3 393 aa13.02□□□□□ -0.33
PCDHGB4-201ENST00000519479 RTCBQ9Y3I0 505 aaKnown RBP13.02□□□□□ -0.33
PCDHGB4-201ENST00000519479 MST1RQ04912 1400 aa13.02□□□□□ -0.33
PCDHGB4-201ENST00000519479 ADGRB2O60241 1585 aa13.02□□□□□ -0.33
PCDHGB4-201ENST00000519479 E7EWF7 191 aa13.01□□□□□ -0.33
PCDHGB4-201ENST00000519479 PTPN12Q05209 780 aaKnown RBP13.01□□□□□ -0.33
PCDHGB4-201ENST00000519479 OTUD7BQ6GQQ9 843 aa13.01□□□□□ -0.33
PCDHGB4-201ENST00000519479 MIGA1Q8NAN2 632 aa13.01□□□□□ -0.33
PCDHGB4-201ENST00000519479 MKNK2Q9HBH9 465 aa13.01□□□□□ -0.33
PCDHGB4-201ENST00000519479 NRKQ7Z2Y5 1582 aa13.01□□□□□ -0.33
PCDHGB4-201ENST00000519479 NEMFO60524 1076 aa13.01□□□□□ -0.33
PCDHGB4-201ENST00000519479 TMC6Q7Z403 805 aa13.01□□□□□ -0.33
PCDHGB4-201ENST00000519479 AOPEPQ8N6M6 819 aa13.01□□□□□ -0.33
PCDHGB4-201ENST00000519479 MAP2P11137 1827 aaKnown RBP13.01□□□□□ -0.33
PCDHGB4-201ENST00000519479 LARGE1O95461 756 aa13.01□□□□□ -0.33
PCDHGB4-201ENST00000519479 RTN1Q16799 776 aa13.01□□□□□ -0.33
PCDHGB4-201ENST00000519479 SMARCE1Q969G3 411 aa13.01□□□□□ -0.33
PCDHGB4-201ENST00000519479 NCAPD2Q15021 1401 aa13.01□□□□□ -0.33
PCDHGB4-201ENST00000519479 CYP27B1O15528 508 aa13.01□□□□□ -0.33
PCDHGB4-201ENST00000519479 ATP2B2Q01814 1243 aa13.01□□□□□ -0.33
PCDHGB4-201ENST00000519479 EPHA10Q5JZY3 1008 aa13.01□□□□□ -0.33
PCDHGB4-201ENST00000519479 ADCY9O60503 1353 aa13□□□□□ -0.33
PCDHGB4-201ENST00000519479 PTGS1P23219 599 aa13□□□□□ -0.33
PCDHGB4-201ENST00000519479 NBPF14Q5TI25 921 aa13□□□□□ -0.33
PCDHGB4-201ENST00000519479 KLHL34Q8N239 644 aa13□□□□□ -0.33
PCDHGB4-201ENST00000519479 NSFL1CQ9UNZ2 370 aaKnown RBP13□□□□□ -0.33
PCDHGB4-201ENST00000519479 ITSN1Q15811 1721 aa13□□□□□ -0.33
PCDHGB4-201ENST00000519479 B4E1Z4 1266 aa13□□□□□ -0.33
PCDHGB4-201ENST00000519479 SH3TC1Q8TE82 1336 aa13□□□□□ -0.33
PCDHGB4-201ENST00000519479 A0A1B0GVL5 298 aa13□□□□□ -0.33
PCDHGB4-201ENST00000519479 PDE8AO60658 829 aa13□□□□□ -0.33
PCDHGB4-201ENST00000519479 MBD4O95243 580 aa13□□□□□ -0.33
PCDHGB4-201ENST00000519479 TOP1P11387 765 aaKnown RBP13□□□□□ -0.33
PCDHGB4-201ENST00000519479 GSDMDP57764 484 aa13□□□□□ -0.33
PCDHGB4-201ENST00000519479 NECTIN1Q15223 517 aa13□□□□□ -0.33
PCDHGB4-201ENST00000519479 SOGA3Q5TF21 947 aa13□□□□□ -0.33
PCDHGB4-201ENST00000519479 PDCL2Q8N4E4 241 aa13□□□□□ -0.33
PCDHGB4-201ENST00000519479 GOLGA6L1Q8N7Z2 621 aa13□□□□□ -0.33
PCDHGB4-201ENST00000519479 PRIMPOLQ96LW4 560 aa13□□□□□ -0.33
PCDHGB4-201ENST00000519479 PUS3Q9BZE2 481 aaKnown RBP13□□□□□ -0.33
PCDHGB4-201ENST00000519479 HSPD1P10809 573 aaKnown RBP13□□□□□ -0.33
PCDHGB4-201ENST00000519479 BRAPQ7Z569 592 aa13□□□□□ -0.33
PCDHGB4-201ENST00000519479 ESR2Q92731 530 aa13□□□□□ -0.33
PCDHGB4-201ENST00000519479 MAGEC2Q9UBF1 373 aaPredicted RBP13□□□□□ -0.33
PCDHGB4-201ENST00000519479 SLC4A8Q2Y0W8 1093 aa12.99□□□□□ -0.33
PCDHGB4-201ENST00000519479 ATL3Q6DD88 541 aa12.99□□□□□ -0.33
PCDHGB4-201ENST00000519479 TTC6Q86TZ1 520 aa12.99□□□□□ -0.33
PCDHGB4-201ENST00000519479 TMTC2Q8N394 836 aa12.99□□□□□ -0.33
PCDHGB4-201ENST00000519479 KIF18AQ8NI77 898 aa12.99□□□□□ -0.33
PCDHGB4-201ENST00000519479 CDK5RAP3Q96JB5 506 aa12.99□□□□□ -0.33
PCDHGB4-201ENST00000519479 PDCL3Q9H2J4 239 aa12.99□□□□□ -0.33
PCDHGB4-201ENST00000519479 CLSTN2Q9H4D0 955 aa12.99□□□□□ -0.33
PCDHGB4-201ENST00000519479 DYNC1I1O14576 645 aa12.99□□□□□ -0.33
PCDHGB4-201ENST00000519479 CYP21A2P08686 494 aa12.99□□□□□ -0.33
PCDHGB4-201ENST00000519479 LIG1P18858 919 aa12.99□□□□□ -0.33
PCDHGB4-201ENST00000519479 FAM160A1Q05DH4 1040 aa12.99□□□□□ -0.33
PCDHGB4-201ENST00000519479 NYXQ9GZU5 481 aa12.99□□□□□ -0.33
PCDHGB4-201ENST00000519479 NLRP5P59047 1200 aa12.99□□□□□ -0.33
PCDHGB4-201ENST00000519479 PUM3Q15397 648 aaKnown RBP12.99□□□□□ -0.33
PCDHGB4-201ENST00000519479 CCNL1Q9UK58 526 aaPredicted RBP12.99□□□□□ -0.33
PCDHGB4-201ENST00000519479 ZDHHC9Q9Y397 364 aa12.99□□□□□ -0.33
PCDHGB4-201ENST00000519479 NAA16Q6N069 864 aaPredicted RBP12.98□□□□□ -0.33
PCDHGB4-201ENST00000519479 NBPF5PQ86XG9 351 aaPredicted RBP12.98□□□□□ -0.33
PCDHGB4-201ENST00000519479 TSPY2A6NKD2 308 aa12.98□□□□□ -0.33
PCDHGB4-201ENST00000519479 STIM1Q13586 685 aa12.98□□□□□ -0.33
PCDHGB4-201ENST00000519479 SAMD1Q6SPF0 538 aaPredicted RBP12.98□□□□□ -0.33
PCDHGB4-201ENST00000519479 ANGEL1Q9UNK9 670 aaKnown RBP12.98□□□□□ -0.33
PCDHGB4-201ENST00000519479 SKILP12757 684 aa12.98□□□□□ -0.33
PCDHGB4-201ENST00000519479 IKQ13123 557 aaPredicted RBP12.98□□□□□ -0.33
PCDHGB4-201ENST00000519479 GPS2Q13227 327 aa12.98□□□□□ -0.33
PCDHGB4-201ENST00000519479 FAM196AQ6ZSG2 479 aa12.98□□□□□ -0.33
PCDHGB4-201ENST00000519479 KIF2AO00139 706 aaPredicted RBP12.98□□□□□ -0.33
PCDHGB4-201ENST00000519479 RXRBP28702 533 aa12.98□□□□□ -0.33
PCDHGB4-201ENST00000519479 ZKSCAN3Q9BRR0 538 aa12.98□□□□□ -0.33
PCDHGB4-201ENST00000519479 ASAP1Q9ULH1 1129 aa12.98□□□□□ -0.33
PCDHGB4-201ENST00000519479 SETDB2Q96T68 719 aa12.97□□□□□ -0.33
PCDHGB4-201ENST00000519479 GNAT2P19087 354 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms