RNA–Protein interactions for RNA: ENST00000518936.5

PCM1-210, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 710 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-210ENST00000518936 DPY19L2Q6NUT2 758 aa26■■□□□ 1.75
PCM1-210ENST00000518936 USP17L1Q7RTZ2 530 aa26■■□□□ 1.75
PCM1-210ENST00000518936 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26■■□□□ 1.75
PCM1-210ENST00000518936 FAM205AQ6ZU69 1335 aa25.99■■□□□ 1.75
PCM1-210ENST00000518936 FZD9O00144 591 aa25.99■■□□□ 1.75
PCM1-210ENST00000518936 TMED8Q6PL24 325 aaPredicted RBP25.99■■□□□ 1.75
PCM1-210ENST00000518936 OSBPL3Q9H4L5 887 aa25.99■■□□□ 1.75
PCM1-210ENST00000518936 SUGT1Q9Y2Z0 365 aa25.99■■□□□ 1.75
PCM1-210ENST00000518936 PSME4Q14997 1843 aa25.98■■□□□ 1.75
PCM1-210ENST00000518936 TIAM2Q8IVF5 1701 aa25.98■■□□□ 1.75
PCM1-210ENST00000518936 WTIPA6NIX2 430 aaPredicted RBP25.98■■□□□ 1.75
PCM1-210ENST00000518936 LRRFIP1Q32MZ4 808 aaKnown RBP25.98■■□□□ 1.75
PCM1-210ENST00000518936 SPTY2D1Q68D10 685 aaPredicted RBP25.98■■□□□ 1.75
PCM1-210ENST00000518936 TTLL5Q6EMB2 1281 aa25.98■■□□□ 1.75
PCM1-210ENST00000518936 CIAPIN1Q6FI81 312 aa25.98■■□□□ 1.75
PCM1-210ENST00000518936 SPATA5Q8NB90 893 aa25.98■■□□□ 1.75
PCM1-210ENST00000518936 TLR7Q9NYK1 1049 aaKnown RBP25.98■■□□□ 1.75
PCM1-210ENST00000518936 PDE1AP54750 535 aa25.97■■□□□ 1.75
PCM1-210ENST00000518936 RPS12P25398 132 aaKnown RBP25.96■■□□□ 1.75
PCM1-210ENST00000518936 TICAM2Q86XR7 235 aa25.96■■□□□ 1.75
PCM1-210ENST00000518936 MAST3O60307 1309 aa25.95■■□□□ 1.75
PCM1-210ENST00000518936 SALL3Q9BXA9 1300 aa25.95■■□□□ 1.75
PCM1-210ENST00000518936 SALL1Q9NSC2 1324 aa25.95■■□□□ 1.75
PCM1-210ENST00000518936 FBXW7Q969H0 707 aa25.95■■□□□ 1.74
PCM1-210ENST00000518936 GTF2IP78347 998 aa25.94■■□□□ 1.74
PCM1-210ENST00000518936 RASGRF1Q13972 1273 aa25.94■■□□□ 1.74
PCM1-210ENST00000518936 PLEKHM2Q8IWE5 1019 aa25.94■■□□□ 1.74
PCM1-210ENST00000518936 GPC2Q8N158 579 aa25.94■■□□□ 1.74
PCM1-210ENST00000518936 HAUS7Q99871 368 aa25.94■■□□□ 1.74
PCM1-210ENST00000518936 MCAMP43121 646 aa25.93■■□□□ 1.74
PCM1-210ENST00000518936 CHAF1AQ13111 956 aaPredicted RBP25.93■■□□□ 1.74
PCM1-210ENST00000518936 SLF2Q8IX21 1173 aa25.93■■□□□ 1.74
PCM1-210ENST00000518936 C16orf71Q8IYS4 520 aaPredicted RBP25.93■■□□□ 1.74
PCM1-210ENST00000518936 AGBL3Q8NEM8 1001 aa25.93■■□□□ 1.74
PCM1-210ENST00000518936 HMG20BQ9P0W2 317 aa25.93■■□□□ 1.74
PCM1-210ENST00000518936 VIL1P09327 827 aaKnown RBP25.92■■□□□ 1.74
PCM1-210ENST00000518936 MFSD14BQ5SR56 506 aa25.92■■□□□ 1.74
PCM1-210ENST00000518936 YDJCA8MPS7 323 aa25.91■■□□□ 1.74
PCM1-210ENST00000518936 CXCL9Q07325 125 aa25.91■■□□□ 1.74
PCM1-210ENST00000518936 ZSCAN25Q6NSZ9 544 aa25.91■■□□□ 1.74
PCM1-210ENST00000518936 RSBN1LQ6PCB5 846 aaPredicted RBP25.91■■□□□ 1.74
PCM1-210ENST00000518936 BOLA2Q9H3K6 86 aa25.91■■□□□ 1.74
PCM1-210ENST00000518936 HDAC9Q9UKV0 1011 aa25.91■■□□□ 1.74
PCM1-210ENST00000518936 IQSEC3Q9UPP2 1182 aaPredicted RBP25.91■■□□□ 1.74
PCM1-210ENST00000518936 AKAP11Q9UKA4 1901 aa25.9■■□□□ 1.74
PCM1-210ENST00000518936 RAD17O75943 681 aa25.9■■□□□ 1.74
PCM1-210ENST00000518936 PRELPP51888 382 aa25.9■■□□□ 1.74
PCM1-210ENST00000518936 OGFOD1Q8N543 542 aa25.9■■□□□ 1.74
PCM1-210ENST00000518936 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.9■■□□□ 1.74
PCM1-210ENST00000518936 LDHBP07195 334 aaKnown RBP25.89■■□□□ 1.74
PCM1-210ENST00000518936 DACT2Q5SW24 774 aa25.89■■□□□ 1.74
PCM1-210ENST00000518936 CNTROBQ8N137 903 aa25.89■■□□□ 1.74
PCM1-210ENST00000518936 PI4K2BQ8TCG2 481 aa25.89■■□□□ 1.74
PCM1-210ENST00000518936 DNAJC2Q99543 621 aaKnown RBP25.89■■□□□ 1.74
PCM1-210ENST00000518936 PAG1Q9NWQ8 432 aa25.89■■□□□ 1.74
PCM1-210ENST00000518936 SCN9AQ15858 1988 aa25.88■■□□□ 1.73
PCM1-210ENST00000518936 COL4A5P29400 1685 aa25.88■■□□□ 1.73
PCM1-210ENST00000518936 PSMD14O00487 310 aa25.88■■□□□ 1.73
PCM1-210ENST00000518936 GSTO1P78417 241 aa25.88■■□□□ 1.73
PCM1-210ENST00000518936 MAP3K12Q12852 859 aa25.88■■□□□ 1.73
PCM1-210ENST00000518936 ERICH6Q7L0X2 663 aa25.88■■□□□ 1.73
PCM1-210ENST00000518936 DPF2Q92785 391 aa25.88■■□□□ 1.73
PCM1-210ENST00000518936 LRP2BPQ9P2M1 347 aa25.88■■□□□ 1.73
PCM1-210ENST00000518936 ABCF2Q9UG63 623 aa25.88■■□□□ 1.73
PCM1-210ENST00000518936 LMOD1P29536 600 aaPredicted RBP25.87■■□□□ 1.73
PCM1-210ENST00000518936 ZAP70P43403 619 aa25.87■■□□□ 1.73
PCM1-210ENST00000518936 OTUD7AQ8TE49 926 aaPredicted RBP25.87■■□□□ 1.73
PCM1-210ENST00000518936 EVI5LQ96CN4 794 aa25.87■■□□□ 1.73
PCM1-210ENST00000518936 GLTPD2A6NH11 291 aa25.86■■□□□ 1.73
PCM1-210ENST00000518936 PDE4AP27815 886 aa25.86■■□□□ 1.73
PCM1-210ENST00000518936 GJA3Q9Y6H8 435 aa25.86■■□□□ 1.73
PCM1-210ENST00000518936 UTRNP46939 3433 aa25.85■■□□□ 1.73
PCM1-210ENST00000518936 GOLIM4O00461 696 aa25.85■■□□□ 1.73
PCM1-210ENST00000518936 YY1P25490 414 aa25.85■■□□□ 1.73
PCM1-210ENST00000518936 HDLBPQ00341 1268 aaKnown RBP25.85■■□□□ 1.73
PCM1-210ENST00000518936 SCARF1Q14162 830 aa25.85■■□□□ 1.73
PCM1-210ENST00000518936 DZIP1Q86YF9 867 aaKnown RBP25.85■■□□□ 1.73
PCM1-210ENST00000518936 CERS3Q8IU89 383 aa25.85■■□□□ 1.73
PCM1-210ENST00000518936 MRIQ9BWK5 157 aa25.85■■□□□ 1.73
PCM1-210ENST00000518936 SNRKQ9NRH2 765 aa25.85■■□□□ 1.73
PCM1-210ENST00000518936 IQCA1LA6NCM1 817 aa25.84■■□□□ 1.73
PCM1-210ENST00000518936 TRIM6-TRIM34B2RNG4 842 aa25.84■■□□□ 1.73
PCM1-210ENST00000518936 HIP1O00291 1037 aa25.84■■□□□ 1.73
PCM1-210ENST00000518936 CYP2E1P05181 493 aaPredicted RBP25.84■■□□□ 1.73
PCM1-210ENST00000518936 LDHCP07864 332 aa25.84■■□□□ 1.73
PCM1-210ENST00000518936 ZFYP08048 801 aaPredicted RBP25.84■■□□□ 1.73
PCM1-210ENST00000518936 TTC22Q5TAA0 569 aa25.84■■□□□ 1.73
PCM1-210ENST00000518936 RFX7Q2KHR2 1363 aa25.83■■□□□ 1.73
PCM1-210ENST00000518936 H7C1D1 291 aa25.83■■□□□ 1.73
PCM1-210ENST00000518936 RGS3P49796 1198 aa25.83■■□□□ 1.73
PCM1-210ENST00000518936 KBTBD3Q8NAB2 608 aa25.83■■□□□ 1.73
PCM1-210ENST00000518936 RAI14Q9P0K7 980 aa25.83■■□□□ 1.73
PCM1-210ENST00000518936 COL1A1P02452 1464 aaPredicted RBP25.83■■□□□ 1.73
PCM1-210ENST00000518936 ZNF541Q9H0D2 1346 aa25.83■■□□□ 1.73
PCM1-210ENST00000518936 USP17L8P0C7I0 530 aa25.82■■□□□ 1.72
PCM1-210ENST00000518936 L3MBTL3Q96JM7 780 aaPredicted RBP25.82■■□□□ 1.72
PCM1-210ENST00000518936 NOL10Q9BSC4 688 aaKnown RBP25.82■■□□□ 1.72
PCM1-210ENST00000518936 AK9Q5TCS8 1911 aa25.82■■□□□ 1.72
PCM1-210ENST00000518936 MAST2Q6P0Q8 1798 aa25.82■■□□□ 1.72
PCM1-210ENST00000518936 IDH1O75874 414 aaKnown RBP25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms