RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 ERVK-7P63135 1459 aa6.89□□□□□ -1.31
HMGB1P23-201ENST00000518743 DLC1Q96QB1 1528 aa6.89□□□□□ -1.31
HMGB1P23-201ENST00000518743 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.89□□□□□ -1.31
HMGB1P23-201ENST00000518743 MARF1Q9Y4F3 1742 aaKnown RBP6.89□□□□□ -1.31
HMGB1P23-201ENST00000518743 CHD2O14647 1828 aaKnown RBP6.88□□□□□ -1.31
HMGB1P23-201ENST00000518743 TNS1Q9HBL0 1735 aaKnown RBP6.88□□□□□ -1.31
HMGB1P23-201ENST00000518743 ARHGAP35Q9NRY4 1499 aa6.88□□□□□ -1.31
HMGB1P23-201ENST00000518743 TROQ12816 1431 aaPredicted RBP6.88□□□□□ -1.31
HMGB1P23-201ENST00000518743 TMEM2Q9UHN6 1383 aa6.88□□□□□ -1.31
HMGB1P23-201ENST00000518743 TNFRSF21O75509 655 aa6.88□□□□□ -1.31
HMGB1P23-201ENST00000518743 TXLNAP40222 546 aa6.88□□□□□ -1.31
HMGB1P23-201ENST00000518743 IDH3AP50213 366 aa6.88□□□□□ -1.31
HMGB1P23-201ENST00000518743 ORC1Q13415 861 aa6.88□□□□□ -1.31
HMGB1P23-201ENST00000518743 C4orf17Q53FE4 359 aa6.88□□□□□ -1.31
HMGB1P23-201ENST00000518743 FAM182BQ5T319 152 aa6.88□□□□□ -1.31
HMGB1P23-201ENST00000518743 UNC5CLQ8IV45 518 aa6.88□□□□□ -1.31
HMGB1P23-201ENST00000518743 FAM177A1Q8N128 213 aaPredicted RBP6.88□□□□□ -1.31
HMGB1P23-201ENST00000518743 GMLQ99445 158 aa6.88□□□□□ -1.31
HMGB1P23-201ENST00000518743 SYT17Q9BSW7 474 aa6.88□□□□□ -1.31
HMGB1P23-201ENST00000518743 ZNF395Q9H8N7 513 aaPredicted RBP6.88□□□□□ -1.31
HMGB1P23-201ENST00000518743 PRKAG2Q9UGJ0 569 aa6.88□□□□□ -1.31
HMGB1P23-201ENST00000518743 INPP5FQ9Y2H2 1132 aa6.88□□□□□ -1.31
HMGB1P23-201ENST00000518743 NCOA3Q9Y6Q9 1424 aa6.87□□□□□ -1.31
HMGB1P23-201ENST00000518743 A0A1B0GTH6 734 aa6.87□□□□□ -1.31
HMGB1P23-201ENST00000518743 SPINT1O43278 529 aa6.87□□□□□ -1.31
HMGB1P23-201ENST00000518743 PHACTR2O75167 634 aa6.87□□□□□ -1.31
HMGB1P23-201ENST00000518743 APBA3O96018 575 aa6.87□□□□□ -1.31
HMGB1P23-201ENST00000518743 NCLP19338 710 aaKnown RBP6.87□□□□□ -1.31
HMGB1P23-201ENST00000518743 PRR20EP86478 221 aa6.87□□□□□ -1.31
HMGB1P23-201ENST00000518743 PRR20CP86479 221 aa6.87□□□□□ -1.31
HMGB1P23-201ENST00000518743 PRR20DP86480 221 aa6.87□□□□□ -1.31
HMGB1P23-201ENST00000518743 PRR20BP86481 221 aa6.87□□□□□ -1.31
HMGB1P23-201ENST00000518743 PRR20AP86496 221 aa6.87□□□□□ -1.31
HMGB1P23-201ENST00000518743 ARID5AQ03989 594 aa6.87□□□□□ -1.31
HMGB1P23-201ENST00000518743 PTPN12Q05209 780 aaKnown RBP6.87□□□□□ -1.31
HMGB1P23-201ENST00000518743 TAF1CQ15572 869 aaPredicted RBP6.87□□□□□ -1.31
HMGB1P23-201ENST00000518743 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.87□□□□□ -1.31
HMGB1P23-201ENST00000518743 NOP9Q86U38 636 aaKnown RBP6.87□□□□□ -1.31
HMGB1P23-201ENST00000518743 CCDC74AQ96AQ1 378 aa6.87□□□□□ -1.31
HMGB1P23-201ENST00000518743 SPATA32Q96LK8 384 aa6.87□□□□□ -1.31
HMGB1P23-201ENST00000518743 CFHR5Q9BXR6 569 aa6.87□□□□□ -1.31
HMGB1P23-201ENST00000518743 GGNBP2Q9H3C7 697 aa6.87□□□□□ -1.31
HMGB1P23-201ENST00000518743 ZFAND3Q9H8U3 227 aa6.87□□□□□ -1.31
HMGB1P23-201ENST00000518743 POLMQ9NP87 494 aaPredicted RBP6.87□□□□□ -1.31
HMGB1P23-201ENST00000518743 NUP188Q5SRE5 1749 aa6.87□□□□□ -1.31
HMGB1P23-201ENST00000518743 CDC42BPAQ5VT25 1732 aa6.87□□□□□ -1.31
HMGB1P23-201ENST00000518743 DISP2A7MBM2 1401 aa6.86□□□□□ -1.31
HMGB1P23-201ENST00000518743 ATP10DQ9P241 1426 aa6.86□□□□□ -1.31
HMGB1P23-201ENST00000518743 USP31Q70CQ4 1352 aa6.86□□□□□ -1.31
HMGB1P23-201ENST00000518743 FAM187AA6NFU0 413 aa6.86□□□□□ -1.31
HMGB1P23-201ENST00000518743 ZBTB7AO95365 584 aa6.86□□□□□ -1.31
HMGB1P23-201ENST00000518743 BTLAQ7Z6A9 289 aa6.86□□□□□ -1.31
HMGB1P23-201ENST00000518743 USP48Q86UV5 1035 aa6.86□□□□□ -1.31
HMGB1P23-201ENST00000518743 CAMKK2Q96RR4 588 aa6.86□□□□□ -1.31
HMGB1P23-201ENST00000518743 HIRIP3Q9BW71 556 aaPredicted RBP6.86□□□□□ -1.31
HMGB1P23-201ENST00000518743 DDX41Q9UJV9 622 aaKnown RBP6.86□□□□□ -1.31
HMGB1P23-201ENST00000518743 TRAK1Q9UPV9 953 aa6.86□□□□□ -1.31
HMGB1P23-201ENST00000518743 BCS1LQ9Y276 419 aa6.86□□□□□ -1.31
HMGB1P23-201ENST00000518743 GJA3Q9Y6H8 435 aa6.86□□□□□ -1.31
HMGB1P23-201ENST00000518743 TET3O43151 1660 aa6.86□□□□□ -1.31
HMGB1P23-201ENST00000518743 FMN1Q68DA7 1419 aa6.85□□□□□ -1.31
HMGB1P23-201ENST00000518743 PCNTO95613 3336 aa6.85□□□□□ -1.31
HMGB1P23-201ENST00000518743 OPLAHO14841 1288 aa6.85□□□□□ -1.31
HMGB1P23-201ENST00000518743 INPP5BP32019 993 aa6.85□□□□□ -1.31
HMGB1P23-201ENST00000518743 PWP1Q13610 501 aa6.85□□□□□ -1.31
HMGB1P23-201ENST00000518743 PKDCCQ504Y2 493 aa6.85□□□□□ -1.31
HMGB1P23-201ENST00000518743 ARSJQ5FYB0 599 aaPredicted RBP6.85□□□□□ -1.31
HMGB1P23-201ENST00000518743 DNAJC5GQ8N7S2 189 aa6.85□□□□□ -1.31
HMGB1P23-201ENST00000518743 SETDB2Q96T68 719 aa6.85□□□□□ -1.31
HMGB1P23-201ENST00000518743 ELP3Q9H9T3 547 aa6.85□□□□□ -1.31
HMGB1P23-201ENST00000518743 ZFYVE1Q9HBF4 777 aa6.85□□□□□ -1.31
HMGB1P23-201ENST00000518743 ZFYVE28Q9HCC9 887 aa6.85□□□□□ -1.31
HMGB1P23-201ENST00000518743 DMGDHQ9UI17 866 aaKnown RBP6.85□□□□□ -1.31
HMGB1P23-201ENST00000518743 GGT7Q9UJ14 662 aa6.85□□□□□ -1.31
HMGB1P23-201ENST00000518743 RTCBQ9Y3I0 505 aaKnown RBP6.85□□□□□ -1.31
HMGB1P23-201ENST00000518743 PIK3C2BO00750 1634 aa6.85□□□□□ -1.31
HMGB1P23-201ENST00000518743 DHX29Q7Z478 1369 aaKnown RBP6.84□□□□□ -1.31
HMGB1P23-201ENST00000518743 PARD3Q8TEW0 1356 aa6.84□□□□□ -1.31
HMGB1P23-201ENST00000518743 TRIM37O94972 964 aa6.84□□□□□ -1.31
HMGB1P23-201ENST00000518743 RLBP1P12271 317 aa6.84□□□□□ -1.31
HMGB1P23-201ENST00000518743 GSTT1P30711 240 aa6.84□□□□□ -1.31
HMGB1P23-201ENST00000518743 LYSMD3Q7Z3D4 306 aa6.84□□□□□ -1.31
HMGB1P23-201ENST00000518743 CMTR1Q8N1G2 835 aaKnown RBP6.84□□□□□ -1.31
HMGB1P23-201ENST00000518743 LINC00528Q8N1L1 170 aa6.84□□□□□ -1.31
HMGB1P23-201ENST00000518743 C7orf43Q8WVR3 580 aa6.84□□□□□ -1.31
HMGB1P23-201ENST00000518743 RREB1Q92766 1687 aa6.84□□□□□ -1.32
HMGB1P23-201ENST00000518743 GOLGB1Q14789 3259 aaKnown RBP6.83□□□□□ -1.32
HMGB1P23-201ENST00000518743 EFCAB6Q5THR3 1501 aa6.83□□□□□ -1.32
HMGB1P23-201ENST00000518743 EGFRP00533 1210 aa6.83□□□□□ -1.32
HMGB1P23-201ENST00000518743 CTSHP09668 335 aa6.83□□□□□ -1.32
HMGB1P23-201ENST00000518743 INSM2Q96T92 566 aaPredicted RBP6.83□□□□□ -1.32
HMGB1P23-201ENST00000518743 NOC4LQ9BVI4 516 aaKnown RBP6.83□□□□□ -1.32
HMGB1P23-201ENST00000518743 ACBD3Q9H3P7 528 aa6.83□□□□□ -1.32
HMGB1P23-201ENST00000518743 PDE4DIPQ5VU43 2346 aa6.83□□□□□ -1.32
HMGB1P23-201ENST00000518743 MST1RQ04912 1400 aa6.83□□□□□ -1.32
HMGB1P23-201ENST00000518743 POTECB2RU33 542 aa6.82□□□□□ -1.32
HMGB1P23-201ENST00000518743 J3QL48 77 aa6.82□□□□□ -1.32
HMGB1P23-201ENST00000518743 GADD45BO75293 160 aaPredicted RBP6.82□□□□□ -1.32
HMGB1P23-201ENST00000518743 DGAT1O75907 488 aa6.82□□□□□ -1.32
HMGB1P23-201ENST00000518743 XRCC5P13010 732 aaKnown RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms