RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 GGA1Q9UJY5 639 aa13.94□□□□□ -0.18
PCDHGA6-201ENST00000517434 NPC1L1Q9UHC9 1359 aa13.94□□□□□ -0.18
PCDHGA6-201ENST00000517434 LIG1P18858 919 aa13.94□□□□□ -0.18
PCDHGA6-201ENST00000517434 CCDC114Q96M63 670 aa13.94□□□□□ -0.18
PCDHGA6-201ENST00000517434 CCDC6Q16204 474 aa13.94□□□□□ -0.18
PCDHGA6-201ENST00000517434 CEP83Q9Y592 693 aa13.94□□□□□ -0.18
PCDHGA6-201ENST00000517434 WTAPQ15007 396 aa13.93□□□□□ -0.18
PCDHGA6-201ENST00000517434 ALS2CR12Q96Q35 445 aa13.93□□□□□ -0.18
PCDHGA6-201ENST00000517434 QTRT2Q9H974 415 aaKnown RBP13.93□□□□□ -0.18
PCDHGA6-201ENST00000517434 PDE8AO60658 829 aa13.93□□□□□ -0.18
PCDHGA6-201ENST00000517434 FKBP15Q5T1M5 1219 aa13.93□□□□□ -0.18
PCDHGA6-201ENST00000517434 BANK1Q8NDB2 785 aa13.93□□□□□ -0.18
PCDHGA6-201ENST00000517434 NSRP1Q9H0G5 558 aaKnown RBP13.93□□□□□ -0.18
PCDHGA6-201ENST00000517434 SLC4A4Q9Y6R1 1079 aa13.93□□□□□ -0.18
PCDHGA6-201ENST00000517434 MAGEB6P1A0A0J9YX57 407 aa13.93□□□□□ -0.18
PCDHGA6-201ENST00000517434 SMARCA5O60264 1052 aaPredicted RBP13.93□□□□□ -0.18
PCDHGA6-201ENST00000517434 U2AF2P26368 475 aaKnown RBP eCLIP13.93□□□□□ -0.18
PCDHGA6-201ENST00000517434 RAB3GAP1Q15042 981 aa13.93□□□□□ -0.18
PCDHGA6-201ENST00000517434 WDR66Q8TBY9 1149 aa13.93□□□□□ -0.18
PCDHGA6-201ENST00000517434 USP37Q86T82 979 aa13.92□□□□□ -0.18
PCDHGA6-201ENST00000517434 VPS36Q86VN1 386 aa13.92□□□□□ -0.18
PCDHGA6-201ENST00000517434 LARGE2Q8N3Y3 721 aa13.92□□□□□ -0.18
PCDHGA6-201ENST00000517434 GTF3C6Q969F1 213 aa13.92□□□□□ -0.18
PCDHGA6-201ENST00000517434 NUP88Q99567 741 aaPredicted RBP13.92□□□□□ -0.18
PCDHGA6-201ENST00000517434 SLC52A2Q9HAB3 445 aa13.92□□□□□ -0.18
PCDHGA6-201ENST00000517434 DPY19L2Q6NUT2 758 aa13.92□□□□□ -0.18
PCDHGA6-201ENST00000517434 ARFGAP2Q8N6H7 521 aa13.92□□□□□ -0.18
PCDHGA6-201ENST00000517434 CPLX3Q8WVH0 158 aa13.92□□□□□ -0.18
PCDHGA6-201ENST00000517434 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.92□□□□□ -0.18
PCDHGA6-201ENST00000517434 NLGN1Q8N2Q7 840 aa13.92□□□□□ -0.18
PCDHGA6-201ENST00000517434 EFCAB6Q5THR3 1501 aa13.92□□□□□ -0.18
PCDHGA6-201ENST00000517434 BRDTQ58F21 947 aaPredicted RBP13.92□□□□□ -0.18
PCDHGA6-201ENST00000517434 TBC1D9Q6ZT07 1266 aa13.92□□□□□ -0.18
PCDHGA6-201ENST00000517434 POTEDQ86YR6 584 aa13.92□□□□□ -0.18
PCDHGA6-201ENST00000517434 TTC41PQ6P2S7 1318 aa13.92□□□□□ -0.18
PCDHGA6-201ENST00000517434 TMCO5BA8MYB1 307 aa13.91□□□□□ -0.18
PCDHGA6-201ENST00000517434 F8W031 263 aaPredicted RBP13.91□□□□□ -0.18
PCDHGA6-201ENST00000517434 MAP2K2P36507 400 aa13.91□□□□□ -0.18
PCDHGA6-201ENST00000517434 KLHL10Q6JEL2 608 aa13.91□□□□□ -0.18
PCDHGA6-201ENST00000517434 DPP8Q6V1X1 898 aaPredicted RBP13.91□□□□□ -0.18
PCDHGA6-201ENST00000517434 SMC5Q8IY18 1101 aa13.91□□□□□ -0.18
PCDHGA6-201ENST00000517434 NIM1KQ8IY84 436 aa13.91□□□□□ -0.18
PCDHGA6-201ENST00000517434 ZRANB1Q9UGI0 708 aa13.91□□□□□ -0.18
PCDHGA6-201ENST00000517434 C8orf34Q49A92 452 aa13.91□□□□□ -0.18
PCDHGA6-201ENST00000517434 ANKRD44Q8N8A2 993 aa13.91□□□□□ -0.18
PCDHGA6-201ENST00000517434 TBC1D22AQ8WUA7 517 aa13.91□□□□□ -0.18
PCDHGA6-201ENST00000517434 NEK1Q96PY6 1258 aa13.91□□□□□ -0.18
PCDHGA6-201ENST00000517434 TAOK3Q9H2K8 898 aa13.91□□□□□ -0.18
PCDHGA6-201ENST00000517434 USP16Q9Y5T5 823 aa13.91□□□□□ -0.18
PCDHGA6-201ENST00000517434 METAP2P50579 478 aaKnown RBP eCLIP13.91□□□□□ -0.18
PCDHGA6-201ENST00000517434 PICK1Q9NRD5 415 aa13.91□□□□□ -0.18
PCDHGA6-201ENST00000517434 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.91□□□□□ -0.18
PCDHGA6-201ENST00000517434 ERBB4Q15303 1308 aa13.91□□□□□ -0.18
PCDHGA6-201ENST00000517434 LTKP29376 864 aa13.91□□□□□ -0.18
PCDHGA6-201ENST00000517434 SLC9C2Q5TAH2 1124 aa13.91□□□□□ -0.18
PCDHGA6-201ENST00000517434 ANKS4BQ8N8V4 417 aa13.91□□□□□ -0.18
PCDHGA6-201ENST00000517434 UFL1O94874 794 aa13.9□□□□□ -0.18
PCDHGA6-201ENST00000517434 SETSIPP0DME0 302 aa13.9□□□□□ -0.18
PCDHGA6-201ENST00000517434 NCBP1Q09161 790 aaKnown RBP13.9□□□□□ -0.18
PCDHGA6-201ENST00000517434 GRM1Q13255 1194 aa13.9□□□□□ -0.18
PCDHGA6-201ENST00000517434 GOPCQ9HD26 462 aa13.9□□□□□ -0.18
PCDHGA6-201ENST00000517434 KAT6BQ8WYB5 2073 aa13.9□□□□□ -0.18
PCDHGA6-201ENST00000517434 GSTTP1A0A1W2PQM5 241 aa13.9□□□□□ -0.18
PCDHGA6-201ENST00000517434 GPR162Q16538 588 aa13.9□□□□□ -0.18
PCDHGA6-201ENST00000517434 RBM26Q5T8P6 1007 aaKnown RBP13.9□□□□□ -0.18
PCDHGA6-201ENST00000517434 GJA3Q9Y6H8 435 aa13.9□□□□□ -0.18
PCDHGA6-201ENST00000517434 ADGBQ8N7X0 1667 aa13.9□□□□□ -0.18
PCDHGA6-201ENST00000517434 MCMDC2Q4G0Z9 681 aa13.9□□□□□ -0.18
PCDHGA6-201ENST00000517434 IFIT1BQ5T764 474 aaKnown RBP13.9□□□□□ -0.18
PCDHGA6-201ENST00000517434 B4GALNT4Q76KP1 1039 aa13.9□□□□□ -0.18
PCDHGA6-201ENST00000517434 DAAM2Q86T65 1068 aa13.9□□□□□ -0.18
PCDHGA6-201ENST00000517434 CNKSR1Q969H4 720 aa13.9□□□□□ -0.18
PCDHGA6-201ENST00000517434 VTI1AQ96AJ9 217 aa13.9□□□□□ -0.18
PCDHGA6-201ENST00000517434 TFIP11Q9UBB9 837 aaKnown RBP13.9□□□□□ -0.18
PCDHGA6-201ENST00000517434 STAMBPO95630 424 aa13.9□□□□□ -0.19
PCDHGA6-201ENST00000517434 UBE4AQ14139 1066 aa13.9□□□□□ -0.19
PCDHGA6-201ENST00000517434 DNAJC21Q5F1R6 531 aaKnown RBP13.9□□□□□ -0.19
PCDHGA6-201ENST00000517434 UTP14CQ5TAP6 766 aaKnown RBP13.9□□□□□ -0.19
PCDHGA6-201ENST00000517434 HDXQ7Z353 690 aa13.9□□□□□ -0.19
PCDHGA6-201ENST00000517434 NAP1L4Q99733 375 aaKnown RBP13.9□□□□□ -0.19
PCDHGA6-201ENST00000517434 SAMM50Q9Y512 469 aa13.9□□□□□ -0.19
PCDHGA6-201ENST00000517434 ANO6Q4KMQ2 910 aa13.89□□□□□ -0.19
PCDHGA6-201ENST00000517434 KANK3Q6NY19 840 aa13.89□□□□□ -0.19
PCDHGA6-201ENST00000517434 TMOD4Q9NZQ9 345 aa13.89□□□□□ -0.19
PCDHGA6-201ENST00000517434 UBA7P41226 1012 aa13.89□□□□□ -0.19
PCDHGA6-201ENST00000517434 CLNS1AP54105 237 aaKnown RBP13.89□□□□□ -0.19
PCDHGA6-201ENST00000517434 CACNA2D4Q7Z3S7 1137 aa13.89□□□□□ -0.19
PCDHGA6-201ENST00000517434 RTL9Q8NET4 1388 aa13.89□□□□□ -0.19
PCDHGA6-201ENST00000517434 H7C1D1 291 aa13.89□□□□□ -0.19
PCDHGA6-201ENST00000517434 RIOK3O14730 519 aaKnown RBP13.89□□□□□ -0.19
PCDHGA6-201ENST00000517434 ZSCAN22P10073 491 aaPredicted RBP13.89□□□□□ -0.19
PCDHGA6-201ENST00000517434 FBLN1P23142 703 aa13.89□□□□□ -0.19
PCDHGA6-201ENST00000517434 CALML3P27482 149 aa13.89□□□□□ -0.19
PCDHGA6-201ENST00000517434 HIBADHP31937 336 aaKnown RBP13.89□□□□□ -0.19
PCDHGA6-201ENST00000517434 SEPT6Q14141 434 aa13.89□□□□□ -0.19
PCDHGA6-201ENST00000517434 MRPL50Q8N5N7 158 aaKnown RBP13.89□□□□□ -0.19
PCDHGA6-201ENST00000517434 METTL22Q9BUU2 404 aaPredicted RBP13.89□□□□□ -0.19
PCDHGA6-201ENST00000517434 PICALMQ13492 652 aa13.88□□□□□ -0.19
PCDHGA6-201ENST00000517434 HDAC1Q13547 482 aaPredicted RBP13.88□□□□□ -0.19
PCDHGA6-201ENST00000517434 TNFAIP1Q13829 316 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms