RNA–Protein interactions for RNA: ENST00000517276.1

SCARNA11.3-201, small Cajal body-specific RNA 11, humanhuman

BASIC

Gene SCARNA11, Length 130 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA11.3-201ENST00000517276 TMEM214Q6NUQ4 689 aaKnown RBP3.56□□□□□ -1.84
SCARNA11.3-201ENST00000517276 C6orf15Q6UXA7 325 aaPredicted RBP3.56□□□□□ -1.84
SCARNA11.3-201ENST00000517276 DTHD1Q6ZMT9 781 aa3.56□□□□□ -1.84
SCARNA11.3-201ENST00000517276 RUFY4Q6ZNE9 571 aa3.56□□□□□ -1.84
SCARNA11.3-201ENST00000517276 GK5Q6ZS86 529 aa3.56□□□□□ -1.84
SCARNA11.3-201ENST00000517276 SV2BQ7L1I2 683 aa3.56□□□□□ -1.84
SCARNA11.3-201ENST00000517276 JMYQ8N9B5 988 aa3.56□□□□□ -1.84
SCARNA11.3-201ENST00000517276 ANKRD24Q8TF21 1146 aa3.56□□□□□ -1.84
SCARNA11.3-201ENST00000517276 CHAC2Q8WUX2 184 aa3.56□□□□□ -1.84
SCARNA11.3-201ENST00000517276 JARID2Q92833 1246 aaPredicted RBP3.56□□□□□ -1.84
SCARNA11.3-201ENST00000517276 AIDAQ96BJ3 306 aa3.56□□□□□ -1.84
SCARNA11.3-201ENST00000517276 CRBNQ96SW2 442 aa3.56□□□□□ -1.84
SCARNA11.3-201ENST00000517276 TMX1Q9H3N1 280 aa3.56□□□□□ -1.84
SCARNA11.3-201ENST00000517276 IL21Q9HBE4 155 aa3.56□□□□□ -1.84
SCARNA11.3-201ENST00000517276 ABCB6Q9NP58 842 aa3.56□□□□□ -1.84
SCARNA11.3-201ENST00000517276 TERF2IPQ9NYB0 399 aa3.56□□□□□ -1.84
SCARNA11.3-201ENST00000517276 ANKIB1Q9P2G1 1089 aa3.56□□□□□ -1.84
SCARNA11.3-201ENST00000517276 ZMYM5Q9UJ78 669 aa3.56□□□□□ -1.84
SCARNA11.3-201ENST00000517276 FNDC3AQ9Y2H6 1198 aaKnown RBP3.56□□□□□ -1.84
SCARNA11.3-201ENST00000517276 PCDHB5Q9Y5E4 795 aa3.56□□□□□ -1.84
SCARNA11.3-201ENST00000517276 TMEM238LA0A1B0GVL6 79 aa3.55□□□□□ -1.84
SCARNA11.3-201ENST00000517276 CCDC189A1A4V9 331 aa3.55□□□□□ -1.84
SCARNA11.3-201ENST00000517276 KIF3BO15066 747 aa3.55□□□□□ -1.84
SCARNA11.3-201ENST00000517276 XYLBO75191 536 aa3.55□□□□□ -1.84
SCARNA11.3-201ENST00000517276 TRPA1O75762 1119 aa3.55□□□□□ -1.84
SCARNA11.3-201ENST00000517276 ADH1CP00326 375 aa3.55□□□□□ -1.84
SCARNA11.3-201ENST00000517276 FAM153BP0C7A2 387 aa3.55□□□□□ -1.84
SCARNA11.3-201ENST00000517276 ATF3P18847 181 aa3.55□□□□□ -1.84
SCARNA11.3-201ENST00000517276 CES1P23141 567 aa3.55□□□□□ -1.84
SCARNA11.3-201ENST00000517276 STAT3P40763 770 aa3.55□□□□□ -1.84
SCARNA11.3-201ENST00000517276 PTGIRP43119 386 aa3.55□□□□□ -1.84
SCARNA11.3-201ENST00000517276 PHKA2P46019 1235 aa3.55□□□□□ -1.84
SCARNA11.3-201ENST00000517276 VEGFBP49765 207 aa3.55□□□□□ -1.84
SCARNA11.3-201ENST00000517276 RELBQ01201 579 aa3.55□□□□□ -1.84
SCARNA11.3-201ENST00000517276 CLCQ05315 142 aa3.55□□□□□ -1.84
SCARNA11.3-201ENST00000517276 MCL1Q07820 350 aa3.55□□□□□ -1.84
SCARNA11.3-201ENST00000517276 FXNQ16595 210 aa3.55□□□□□ -1.84
SCARNA11.3-201ENST00000517276 ZFYVE27Q5T4F4 411 aa3.55□□□□□ -1.84
SCARNA11.3-201ENST00000517276 RC3H1Q5TC82 1133 aaKnown RBP3.55□□□□□ -1.84
SCARNA11.3-201ENST00000517276 PPP4R4Q6NUP7 873 aa3.55□□□□□ -1.84
SCARNA11.3-201ENST00000517276 THSD4Q6ZMP0 1018 aa3.55□□□□□ -1.84
SCARNA11.3-201ENST00000517276 MAMSTRQ6ZN01 415 aa3.55□□□□□ -1.84
SCARNA11.3-201ENST00000517276 ANKRD13DQ6ZTN6 518 aa3.55□□□□□ -1.84
SCARNA11.3-201ENST00000517276 BTLAQ7Z6A9 289 aa3.55□□□□□ -1.84
SCARNA11.3-201ENST00000517276 LSRQ86X29 649 aaPredicted RBP3.55□□□□□ -1.84
SCARNA11.3-201ENST00000517276 TEX2Q8IWB9 1127 aa3.55□□□□□ -1.84
SCARNA11.3-201ENST00000517276 NIM1KQ8IY84 436 aa3.55□□□□□ -1.84
SCARNA11.3-201ENST00000517276 RHBDD1Q8TEB9 315 aa3.55□□□□□ -1.84
SCARNA11.3-201ENST00000517276 MFSD3Q96ES6 412 aa3.55□□□□□ -1.84
SCARNA11.3-201ENST00000517276 IL17RAQ96F46 866 aa3.55□□□□□ -1.84
SCARNA11.3-201ENST00000517276 NLRP3Q96P20 1036 aa3.55□□□□□ -1.84
SCARNA11.3-201ENST00000517276 SMAD5Q99717 465 aaKnown RBP3.55□□□□□ -1.84
SCARNA11.3-201ENST00000517276 APBA2Q99767 749 aa3.55□□□□□ -1.84
SCARNA11.3-201ENST00000517276 ARPC5LQ9BPX5 153 aa3.55□□□□□ -1.84
SCARNA11.3-201ENST00000517276 UBA5Q9GZZ9 404 aa3.55□□□□□ -1.84
SCARNA11.3-201ENST00000517276 ZNF395Q9H8N7 513 aaPredicted RBP3.55□□□□□ -1.84
SCARNA11.3-201ENST00000517276 BRMS1Q9HCU9 246 aa3.55□□□□□ -1.84
SCARNA11.3-201ENST00000517276 PPP4R2Q9NY27 417 aa3.55□□□□□ -1.84
SCARNA11.3-201ENST00000517276 ABI2Q9NYB9 513 aaPredicted RBP3.55□□□□□ -1.84
SCARNA11.3-201ENST00000517276 SALL4Q9UJQ4 1053 aa3.55□□□□□ -1.84
SCARNA11.3-201ENST00000517276 TRAK1Q9UPV9 953 aa3.55□□□□□ -1.84
SCARNA11.3-201ENST00000517276 A0A0U1RQG5 324 aaPredicted RBP3.54□□□□□ -1.84
SCARNA11.3-201ENST00000517276 METTL12A8MUP2 240 aa3.54□□□□□ -1.84
SCARNA11.3-201ENST00000517276 ENC1O14682 589 aa3.54□□□□□ -1.84
SCARNA11.3-201ENST00000517276 SIAH2O43255 324 aa3.54□□□□□ -1.84
SCARNA11.3-201ENST00000517276 PDE8AO60658 829 aa3.54□□□□□ -1.84
SCARNA11.3-201ENST00000517276 CAND2O75155 1236 aa3.54□□□□□ -1.84
SCARNA11.3-201ENST00000517276 WDHD1O75717 1129 aaPredicted RBP3.54□□□□□ -1.84
SCARNA11.3-201ENST00000517276 BPNT1O95861 308 aa3.54□□□□□ -1.84
SCARNA11.3-201ENST00000517276 RLBP1P12271 317 aa3.54□□□□□ -1.84
SCARNA11.3-201ENST00000517276 RAB27AP51159 221 aa3.54□□□□□ -1.84
SCARNA11.3-201ENST00000517276 FOXD4Q12950 439 aaPredicted RBP3.54□□□□□ -1.84
SCARNA11.3-201ENST00000517276 SPRED3Q2MJR0 410 aa3.54□□□□□ -1.84
SCARNA11.3-201ENST00000517276 CT47A1Q5JQC4 288 aaPredicted RBP3.54□□□□□ -1.84
SCARNA11.3-201ENST00000517276 RASIP1Q5U651 963 aa3.54□□□□□ -1.84
SCARNA11.3-201ENST00000517276 IER5Q5VY09 327 aa3.54□□□□□ -1.84
SCARNA11.3-201ENST00000517276 CCSAPQ6IQ19 270 aaPredicted RBP3.54□□□□□ -1.84
SCARNA11.3-201ENST00000517276 AGMOQ6ZNB7 445 aa3.54□□□□□ -1.84
SCARNA11.3-201ENST00000517276 LRRC69Q6ZNQ3 347 aa3.54□□□□□ -1.84
SCARNA11.3-201ENST00000517276 BICDL1Q6ZP65 573 aa3.54□□□□□ -1.84
SCARNA11.3-201ENST00000517276 STRA8Q7Z7C7 330 aa3.54□□□□□ -1.84
SCARNA11.3-201ENST00000517276 RNF180Q86T96 592 aa3.54□□□□□ -1.84
SCARNA11.3-201ENST00000517276 FAM178BQ8IXR5 827 aa3.54□□□□□ -1.84
SCARNA11.3-201ENST00000517276 NINJ1Q92982 152 aa3.54□□□□□ -1.84
SCARNA11.3-201ENST00000517276 TCF12Q99081 682 aa3.54□□□□□ -1.84
SCARNA11.3-201ENST00000517276 CAAP1Q9H8G2 361 aa3.54□□□□□ -1.84
SCARNA11.3-201ENST00000517276 LIN7BQ9HAP6 207 aa3.54□□□□□ -1.84
SCARNA11.3-201ENST00000517276 ARNT2Q9HBZ2 717 aa3.54□□□□□ -1.84
SCARNA11.3-201ENST00000517276 DZANK1Q9NVP4 752 aa3.54□□□□□ -1.84
SCARNA11.3-201ENST00000517276 PGPEP1Q9NXJ5 209 aa3.54□□□□□ -1.84
SCARNA11.3-201ENST00000517276 SFMBT1Q9UHJ3 866 aa3.54□□□□□ -1.84
SCARNA11.3-201ENST00000517276 PPM1HQ9ULR3 514 aa3.54□□□□□ -1.84
SCARNA11.3-201ENST00000517276 PLAAQ9Y263 795 aa3.54□□□□□ -1.84
SCARNA11.3-201ENST00000517276 COMMD10Q9Y6G5 202 aa3.54□□□□□ -1.84
SCARNA11.3-201ENST00000517276 UPK3BL1B0FP48 263 aa3.53□□□□□ -1.84
SCARNA11.3-201ENST00000517276 UPK3BL2E5RIL1 263 aa3.53□□□□□ -1.84
SCARNA11.3-201ENST00000517276 PRPF3O43395 683 aaKnown RBP3.53□□□□□ -1.84
SCARNA11.3-201ENST00000517276 PLIN1O60240 522 aa3.53□□□□□ -1.84
SCARNA11.3-201ENST00000517276 RASGRP1O95267 797 aa3.53□□□□□ -1.84
SCARNA11.3-201ENST00000517276 KRT18P05783 430 aaKnown RBP3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms