RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 LARP1Q6PKG0 1096 aaKnown RBP0.64□□□□□ -2.31
SNORA40.16-201ENST00000517238 DZIP3Q86Y13 1208 aaKnown RBP0.64□□□□□ -2.31
SNORA40.16-201ENST00000517238 GALNT11Q8NCW6 608 aa0.64□□□□□ -2.31
SNORA40.16-201ENST00000517238 TTC9Q92623 222 aa0.64□□□□□ -2.31
SNORA40.16-201ENST00000517238 GATA6Q92908 595 aa0.64□□□□□ -2.31
SNORA40.16-201ENST00000517238 WBP1Q96G27 269 aa0.64□□□□□ -2.31
SNORA40.16-201ENST00000517238 SGPP1Q9BX95 441 aa0.64□□□□□ -2.31
SNORA40.16-201ENST00000517238 TRIM8Q9BZR9 551 aa0.64□□□□□ -2.31
SNORA40.16-201ENST00000517238 KCNK4Q9NYG8 393 aa0.64□□□□□ -2.31
SNORA40.16-201ENST00000517238 IRAK3Q9Y616 596 aa0.64□□□□□ -2.31
SNORA40.16-201ENST00000517238 A0A0A6YYK5 440 aaPredicted RBP0.63□□□□□ -2.31
SNORA40.16-201ENST00000517238 CAPNS1P04632 268 aa0.63□□□□□ -2.31
SNORA40.16-201ENST00000517238 USP11P51784 963 aa0.63□□□□□ -2.31
SNORA40.16-201ENST00000517238 TLR1Q15399 786 aa0.63□□□□□ -2.31
SNORA40.16-201ENST00000517238 PCSK7Q16549 785 aa0.63□□□□□ -2.31
SNORA40.16-201ENST00000517238 KRT71Q3SY84 523 aa0.63□□□□□ -2.31
SNORA40.16-201ENST00000517238 LRRC69Q6ZNQ3 347 aa0.63□□□□□ -2.31
SNORA40.16-201ENST00000517238 ZNF605Q86T29 641 aa0.63□□□□□ -2.31
SNORA40.16-201ENST00000517238 FAM181AQ8N9Y4 354 aa0.63□□□□□ -2.31
SNORA40.16-201ENST00000517238 ADAM32Q8TC27 787 aa0.63□□□□□ -2.31
SNORA40.16-201ENST00000517238 UBASH3BQ8TF42 649 aa0.63□□□□□ -2.31
SNORA40.16-201ENST00000517238 FBLIM1Q8WUP2 373 aa0.63□□□□□ -2.31
SNORA40.16-201ENST00000517238 TSC1Q92574 1164 aa0.63□□□□□ -2.31
SNORA40.16-201ENST00000517238 ADGRE3Q9BY15 652 aa0.63□□□□□ -2.31
SNORA40.16-201ENST00000517238 RNF208Q9H0X6 261 aa0.63□□□□□ -2.31
SNORA40.16-201ENST00000517238 IGSF5Q9NSI5 407 aa0.63□□□□□ -2.31
SNORA40.16-201ENST00000517238 NOTCH3Q9UM47 2321 aa0.63□□□□□ -2.31
SNORA40.16-201ENST00000517238 LOC100289279A0A1B0GTE1 492 aa0.62□□□□□ -2.31
SNORA40.16-201ENST00000517238 MYOCOSA0A1B0GUC4 107 aa0.62□□□□□ -2.31
SNORA40.16-201ENST00000517238 NDUFV2P19404 249 aa0.62□□□□□ -2.31
SNORA40.16-201ENST00000517238 SCTRP47872 440 aa0.62□□□□□ -2.31
SNORA40.16-201ENST00000517238 CDSNQ15517 529 aa0.62□□□□□ -2.31
SNORA40.16-201ENST00000517238 IFI16Q16666 785 aaKnown RBP0.62□□□□□ -2.31
SNORA40.16-201ENST00000517238 KRTAP13-3Q3SY46 172 aa0.62□□□□□ -2.31
SNORA40.16-201ENST00000517238 AMER2Q8N7J2 671 aa0.62□□□□□ -2.31
SNORA40.16-201ENST00000517238 LINC01356Q8N9X3 169 aa0.62□□□□□ -2.31
SNORA40.16-201ENST00000517238 ABHD4Q8TB40 342 aa0.62□□□□□ -2.31
SNORA40.16-201ENST00000517238 XAGE2Q96GT9 111 aa0.62□□□□□ -2.31
SNORA40.16-201ENST00000517238 SIGLEC10Q96LC7 697 aa0.62□□□□□ -2.31
SNORA40.16-201ENST00000517238 BBC3Q96PG8 261 aaPredicted RBP0.62□□□□□ -2.31
SNORA40.16-201ENST00000517238 PNMA5Q96PV4 448 aa0.62□□□□□ -2.31
SNORA40.16-201ENST00000517238 RBM15Q96T37 977 aaKnown RBP eCLIP0.62□□□□□ -2.31
SNORA40.16-201ENST00000517238 NIFKQ9BYG3 293 aaKnown RBP0.62□□□□□ -2.31
SNORA40.16-201ENST00000517238 VPS33BQ9H267 617 aa0.62□□□□□ -2.31
SNORA40.16-201ENST00000517238 OSBPL3Q9H4L5 887 aa0.62□□□□□ -2.31
SNORA40.16-201ENST00000517238 NEUROD4Q9HD90 331 aa0.62□□□□□ -2.31
SNORA40.16-201ENST00000517238 GCM1Q9NP62 436 aa0.62□□□□□ -2.31
SNORA40.16-201ENST00000517238 BRD7Q9NPI1 651 aa0.62□□□□□ -2.31
SNORA40.16-201ENST00000517238 ZDHHC3Q9NYG2 299 aa0.62□□□□□ -2.31
SNORA40.16-201ENST00000517238 ST6GALNAC2Q9UJ37 374 aa0.62□□□□□ -2.31
SNORA40.16-201ENST00000517238 TEX51A0A1B0GUA7 166 aa0.61□□□□□ -2.31
SNORA40.16-201ENST00000517238 TRAK2O60296 914 aa0.61□□□□□ -2.31
SNORA40.16-201ENST00000517238 CHGAP10645 457 aaKnown RBP0.61□□□□□ -2.31
SNORA40.16-201ENST00000517238 CNR2P34972 360 aa0.61□□□□□ -2.31
SNORA40.16-201ENST00000517238 GDNFP39905 211 aa0.61□□□□□ -2.31
SNORA40.16-201ENST00000517238 MLLT3P42568 568 aaPredicted RBP0.61□□□□□ -2.31
SNORA40.16-201ENST00000517238 C21orf58P58505 322 aa0.61□□□□□ -2.31
SNORA40.16-201ENST00000517238 E2F4Q16254 413 aa0.61□□□□□ -2.31
SNORA40.16-201ENST00000517238 PPP2R2DQ66LE6 453 aa0.61□□□□□ -2.31
SNORA40.16-201ENST00000517238 CRELD2Q6UXH1 353 aaPredicted RBP0.61□□□□□ -2.31
SNORA40.16-201ENST00000517238 ZNF366Q8N895 744 aa0.61□□□□□ -2.31
SNORA40.16-201ENST00000517238 CDK5RAP1Q96SZ6 601 aaKnown RBP0.61□□□□□ -2.31
SNORA40.16-201ENST00000517238 RUSC1Q9BVN2 902 aa0.61□□□□□ -2.31
SNORA40.16-201ENST00000517238 YIPF2Q9BWQ6 316 aa0.61□□□□□ -2.31
SNORA40.16-201ENST00000517238 PTGFRNQ9P2B2 879 aa0.61□□□□□ -2.31
SNORA40.16-201ENST00000517238 KCNH4Q9UQ05 1017 aa0.61□□□□□ -2.31
SNORA40.16-201ENST00000517238 LINC01387J3KSC0 135 aa0.6□□□□□ -2.31
SNORA40.16-201ENST00000517238 DDX3YO15523 660 aaKnown RBP0.6□□□□□ -2.31
SNORA40.16-201ENST00000517238 PEX10O60683 326 aa0.6□□□□□ -2.31
SNORA40.16-201ENST00000517238 EIF2AK2P19525 551 aaKnown RBP0.6□□□□□ -2.31
SNORA40.16-201ENST00000517238 ZFP36P26651 326 aaKnown RBP0.6□□□□□ -2.31
SNORA40.16-201ENST00000517238 MLLT1Q03111 559 aaPredicted RBP0.6□□□□□ -2.31
SNORA40.16-201ENST00000517238 PTK2Q05397 1052 aa0.6□□□□□ -2.31
SNORA40.16-201ENST00000517238 KRTAP5-7Q6L8G8 165 aa0.6□□□□□ -2.31
SNORA40.16-201ENST00000517238 CDPF1Q6NVV7 123 aa0.6□□□□□ -2.31
SNORA40.16-201ENST00000517238 ARHGAP27Q6ZUM4 889 aa0.6□□□□□ -2.31
SNORA40.16-201ENST00000517238 USP43Q70EL4 1123 aa0.6□□□□□ -2.31
SNORA40.16-201ENST00000517238 C12orf50Q8NA57 414 aaPredicted RBP0.6□□□□□ -2.31
SNORA40.16-201ENST00000517238 PPP1R10Q96QC0 940 aaKnown RBP0.6□□□□□ -2.31
SNORA40.16-201ENST00000517238 CARD10Q9BWT7 1032 aa0.6□□□□□ -2.31
SNORA40.16-201ENST00000517238 MUC3BQ9H195 1237 aa0.6□□□□□ -2.31
SNORA40.16-201ENST00000517238 PPME1Q9Y570 386 aa0.6□□□□□ -2.31
SNORA40.16-201ENST00000517238 TMEM265A0A087WTH1 108 aa0.59□□□□□ -2.31
SNORA40.16-201ENST00000517238 ZNF202O95125 648 aa0.59□□□□□ -2.31
SNORA40.16-201ENST00000517238 RAC2P15153 192 aa0.59□□□□□ -2.31
SNORA40.16-201ENST00000517238 BMP5P22003 454 aa0.59□□□□□ -2.31
SNORA40.16-201ENST00000517238 WASP42768 502 aa0.59□□□□□ -2.31
SNORA40.16-201ENST00000517238 MVKQ03426 396 aa0.59□□□□□ -2.31
SNORA40.16-201ENST00000517238 CYP27C1Q4G0S4 372 aa0.59□□□□□ -2.31
SNORA40.16-201ENST00000517238 ESCO1Q5FWF5 840 aa0.59□□□□□ -2.31
SNORA40.16-201ENST00000517238 NT5DC1Q5TFE4 455 aa0.59□□□□□ -2.31
SNORA40.16-201ENST00000517238 TXNDC11Q6PKC3 985 aa0.59□□□□□ -2.31
SNORA40.16-201ENST00000517238 PALM2Q8IXS6 379 aa0.59□□□□□ -2.31
SNORA40.16-201ENST00000517238 KLHL23Q8NBE8 558 aa0.59□□□□□ -2.31
SNORA40.16-201ENST00000517238 DDX1Q92499 740 aaKnown RBP0.59□□□□□ -2.31
SNORA40.16-201ENST00000517238 CEP63Q96MT8 703 aa0.59□□□□□ -2.31
SNORA40.16-201ENST00000517238 AGAP2Q99490 1192 aa0.59□□□□□ -2.31
SNORA40.16-201ENST00000517238 OCSTAMPQ9BR26 566 aa0.59□□□□□ -2.31
SNORA40.16-201ENST00000517238 C19orf73Q9NVV2 129 aa0.59□□□□□ -2.31
SNORA40.16-201ENST00000517238 GTF3C5Q9Y5Q8 519 aaPredicted RBP0.59□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms