RNA–Protein interactions for RNA: ENST00000513206.5

TRIO-221, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 7,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-221ENST00000513206 NOLC1Q14978 699 aaKnown RBP eCLIP18.25■□□□□ 0.51
TRIO-221ENST00000513206 FAM13AO94988 1023 aa18.25■□□□□ 0.51
TRIO-221ENST00000513206 MARCKSP29966 332 aaPredicted RBP18.25■□□□□ 0.51
TRIO-221ENST00000513206 CEP135Q66GS9 1140 aa18.25■□□□□ 0.51
TRIO-221ENST00000513206 C8orf58Q8NAV2 365 aa18.25■□□□□ 0.51
TRIO-221ENST00000513206 CTAGE1Q96RT6 745 aa18.25■□□□□ 0.51
TRIO-221ENST00000513206 ZFYVE9O95405 1425 aa18.25■□□□□ 0.51
TRIO-221ENST00000513206 ALDH1L1O75891 902 aa18.25■□□□□ 0.51
TRIO-221ENST00000513206 MRVI1Q9Y6F6 885 aa18.25■□□□□ 0.51
TRIO-221ENST00000513206 USP25Q9UHP3 1055 aa18.25■□□□□ 0.51
TRIO-221ENST00000513206 CEP83Q9Y592 693 aa18.25■□□□□ 0.51
TRIO-221ENST00000513206 SP4Q02446 784 aa18.24■□□□□ 0.51
TRIO-221ENST00000513206 TAF12Q16514 161 aa18.24■□□□□ 0.51
TRIO-221ENST00000513206 ZRANB1Q9UGI0 708 aa18.24■□□□□ 0.51
TRIO-221ENST00000513206 MCM7P33993 719 aa18.24■□□□□ 0.51
TRIO-221ENST00000513206 SAP30BPQ9UHR5 308 aaKnown RBP18.24■□□□□ 0.51
TRIO-221ENST00000513206 SBNO2Q9Y2G9 1366 aa18.24■□□□□ 0.51
TRIO-221ENST00000513206 ASIC1P78348 528 aa18.24■□□□□ 0.51
TRIO-221ENST00000513206 GNA11P29992 359 aa18.24■□□□□ 0.51
TRIO-221ENST00000513206 TERF1P54274 439 aa18.24■□□□□ 0.51
TRIO-221ENST00000513206 ARHGAP45Q92619 1136 aa18.24■□□□□ 0.51
TRIO-221ENST00000513206 PDE1AP54750 535 aa18.24■□□□□ 0.51
TRIO-221ENST00000513206 CWF19L2Q2TBE0 894 aaKnown RBP18.24■□□□□ 0.51
TRIO-221ENST00000513206 SPAG5Q96R06 1193 aa18.24■□□□□ 0.51
TRIO-221ENST00000513206 GOLGA6L9A6NEM1 432 aa18.23■□□□□ 0.51
TRIO-221ENST00000513206 KIAA0753Q2KHM9 967 aa18.23■□□□□ 0.51
TRIO-221ENST00000513206 KLHL40Q2TBA0 621 aa18.23■□□□□ 0.51
TRIO-221ENST00000513206 CCNL1Q9UK58 526 aaPredicted RBP18.23■□□□□ 0.51
TRIO-221ENST00000513206 ATP7AQ04656 1500 aa18.23■□□□□ 0.51
TRIO-221ENST00000513206 KIF4AO95239 1232 aa18.23■□□□□ 0.51
TRIO-221ENST00000513206 MTHFSDQ2M296 383 aaKnown RBP18.23■□□□□ 0.51
TRIO-221ENST00000513206 ZNF408Q9H9D4 720 aa18.23■□□□□ 0.51
TRIO-221ENST00000513206 IGSF3O75054 1194 aa18.23■□□□□ 0.51
TRIO-221ENST00000513206 ARL1P40616 181 aaPredicted RBP18.23■□□□□ 0.51
TRIO-221ENST00000513206 HSP90AA4PQ58FG1 418 aa18.23■□□□□ 0.51
TRIO-221ENST00000513206 RGS22Q8NE09 1264 aa18.23■□□□□ 0.51
TRIO-221ENST00000513206 SELENOOQ9BVL4 669 aa18.23■□□□□ 0.51
TRIO-221ENST00000513206 PLXNC1O60486 1568 aa18.23■□□□□ 0.51
TRIO-221ENST00000513206 ZSCAN22P10073 491 aaPredicted RBP18.23■□□□□ 0.51
TRIO-221ENST00000513206 FERP16591 822 aa18.23■□□□□ 0.51
TRIO-221ENST00000513206 TCEANC2Q96MN5 208 aa18.23■□□□□ 0.51
TRIO-221ENST00000513206 PSMA7O14818 248 aa18.23■□□□□ 0.51
TRIO-221ENST00000513206 DTHD1Q6ZMT9 781 aa18.23■□□□□ 0.51
TRIO-221ENST00000513206 SREK1Q8WXA9 508 aaKnown RBP18.23■□□□□ 0.51
TRIO-221ENST00000513206 ARID5AQ03989 594 aa18.22■□□□□ 0.51
TRIO-221ENST00000513206 PPP1R14CQ8TAE6 165 aa18.22■□□□□ 0.51
TRIO-221ENST00000513206 NUP160Q12769 1436 aa18.22■□□□□ 0.51
TRIO-221ENST00000513206 POTEB2H3BUK9 544 aa18.22■□□□□ 0.51
TRIO-221ENST00000513206 OTUD6BQ8N6M0 293 aa18.22■□□□□ 0.51
TRIO-221ENST00000513206 A0A1B0GUL7 405 aa18.22■□□□□ 0.51
TRIO-221ENST00000513206 BACH1O14867 736 aa18.22■□□□□ 0.51
TRIO-221ENST00000513206 TMOD4Q9NZQ9 345 aa18.22■□□□□ 0.51
TRIO-221ENST00000513206 RBM27Q9P2N5 1060 aaKnown RBP18.22■□□□□ 0.51
TRIO-221ENST00000513206 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.22■□□□□ 0.518e-7■■□□□ 14.2
TRIO-221ENST00000513206 HDAC1Q13547 482 aaPredicted RBP18.22■□□□□ 0.51
TRIO-221ENST00000513206 ESYT1Q9BSJ8 1104 aa18.22■□□□□ 0.51
TRIO-221ENST00000513206 IGHDP01880 384 aa18.22■□□□□ 0.51
TRIO-221ENST00000513206 SMC1AQ14683 1233 aaKnown RBP18.22■□□□□ 0.51
TRIO-221ENST00000513206 EHBP1Q8NDI1 1231 aa18.22■□□□□ 0.51
TRIO-221ENST00000513206 RBM28Q9NW13 759 aaKnown RBP18.22■□□□□ 0.51
TRIO-221ENST00000513206 STK32BQ9NY57 414 aa18.22■□□□□ 0.51
TRIO-221ENST00000513206 NUP153P49790 1475 aaKnown RBP18.22■□□□□ 0.51
TRIO-221ENST00000513206 H0YIN7 160 aa18.22■□□□□ 0.51
TRIO-221ENST00000513206 AKNAD1Q5T1N1 836 aa18.22■□□□□ 0.51
TRIO-221ENST00000513206 TFCP2Q12800 502 aa18.21■□□□□ 0.51
TRIO-221ENST00000513206 CAVIN2O95810 425 aa18.21■□□□□ 0.51
TRIO-221ENST00000513206 SNW1Q13573 536 aaKnown RBP18.21■□□□□ 0.51
TRIO-221ENST00000513206 UVSSAQ2YD98 709 aa18.21■□□□□ 0.51
TRIO-221ENST00000513206 A0A1W2PRG0 241 aa18.21■□□□□ 0.51
TRIO-221ENST00000513206 ATP8B2P98198 1209 aa18.21■□□□□ 0.51
TRIO-221ENST00000513206 TMX3Q96JJ7 454 aa18.21■□□□□ 0.51
TRIO-221ENST00000513206 ARHGEF10LQ9HCE6 1279 aa18.21■□□□□ 0.51
TRIO-221ENST00000513206 ARFGAP3Q9NP61 516 aa18.21■□□□□ 0.51
TRIO-221ENST00000513206 GIMAP6Q6P9H5 292 aa18.21■□□□□ 0.51
TRIO-221ENST00000513206 LINS1Q8NG48 757 aa18.21■□□□□ 0.51
TRIO-221ENST00000513206 PARP1P09874 1014 aaKnown RBP18.2■□□□□ 0.5
TRIO-221ENST00000513206 RNMTO43148 476 aaKnown RBP18.2■□□□□ 0.5
TRIO-221ENST00000513206 NMIQ13287 307 aaPredicted RBP18.2■□□□□ 0.5
TRIO-221ENST00000513206 ZSCAN23Q3MJ62 389 aa18.2■□□□□ 0.5
TRIO-221ENST00000513206 MRPL50Q8N5N7 158 aaKnown RBP18.2■□□□□ 0.5
TRIO-221ENST00000513206 IP6K1Q92551 441 aa18.2■□□□□ 0.5
TRIO-221ENST00000513206 POLKQ9UBT6 870 aa18.2■□□□□ 0.5
TRIO-221ENST00000513206 AKR1B10O60218 316 aa18.2■□□□□ 0.5
TRIO-221ENST00000513206 UFL1O94874 794 aa18.2■□□□□ 0.5
TRIO-221ENST00000513206 ANKRD44Q8N8A2 993 aa18.2■□□□□ 0.5
TRIO-221ENST00000513206 PPM1EQ8WY54 764 aa18.2■□□□□ 0.5
TRIO-221ENST00000513206 FAM98CQ17RN3 349 aaKnown RBP18.2■□□□□ 0.5
TRIO-221ENST00000513206 GBP6Q6ZN66 633 aa18.2■□□□□ 0.5
TRIO-221ENST00000513206 PTGS1P23219 599 aa18.2■□□□□ 0.5
TRIO-221ENST00000513206 EIF6P56537 245 aaKnown RBP18.2■□□□□ 0.5
TRIO-221ENST00000513206 MICALL1Q8N3F8 863 aa18.19■□□□□ 0.5
TRIO-221ENST00000513206 PAIP2Q9BPZ3 127 aaKnown RBP18.19■□□□□ 0.5
TRIO-221ENST00000513206 DENND2AQ9ULE3 1009 aa18.19■□□□□ 0.5
TRIO-221ENST00000513206 TMEM110-MUSTN1A8MSY1 372 aa18.19■□□□□ 0.5
TRIO-221ENST00000513206 SH2D4AQ9H788 454 aa18.19■□□□□ 0.5
TRIO-221ENST00000513206 TRIM75PA6NK02 468 aa18.19■□□□□ 0.5
TRIO-221ENST00000513206 TEX11Q8IYF3 940 aa18.19■□□□□ 0.5
TRIO-221ENST00000513206 DDX12PQ92771 950 aa18.19■□□□□ 0.5
TRIO-221ENST00000513206 TRAPPC8Q9Y2L5 1435 aa18.19■□□□□ 0.5
TRIO-221ENST00000513206 CCDC175P0C221 793 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms