RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 NBPF9Q3BBW0 867 aa16.9■□□□□ 0.3
SNF8-206ENST00000509989 ECM29Q5VYK3 1845 aa16.9■□□□□ 0.3
SNF8-206ENST00000509989 ADM5C9JUS6 153 aa16.89■□□□□ 0.29
SNF8-206ENST00000509989 SASH1O94885 1247 aa16.89■□□□□ 0.29
SNF8-206ENST00000509989 TIMM10P62072 90 aa16.89■□□□□ 0.29
SNF8-206ENST00000509989 SCARF1Q14162 830 aa16.89■□□□□ 0.29
SNF8-206ENST00000509989 PUM3Q15397 648 aaKnown RBP16.89■□□□□ 0.29
SNF8-206ENST00000509989 CST9Q5W186 159 aa16.89■□□□□ 0.29
SNF8-206ENST00000509989 USP48Q86UV5 1035 aa16.89■□□□□ 0.29
SNF8-206ENST00000509989 MYOZ2Q9NPC6 264 aa16.89■□□□□ 0.29
SNF8-206ENST00000509989 IL15P40933 162 aaPredicted RBP16.88■□□□□ 0.29
SNF8-206ENST00000509989 CHAF1AQ13111 956 aaPredicted RBP16.88■□□□□ 0.29
SNF8-206ENST00000509989 MVPQ14764 893 aaKnown RBP16.88■□□□□ 0.29
SNF8-206ENST00000509989 ATP2B3Q16720 1220 aa16.88■□□□□ 0.29
SNF8-206ENST00000509989 CEP85Q6P2H3 762 aa16.88■□□□□ 0.29
SNF8-206ENST00000509989 SSH3Q8TE77 659 aa16.88■□□□□ 0.29
SNF8-206ENST00000509989 GGA3Q9NZ52 723 aa16.88■□□□□ 0.29
SNF8-206ENST00000509989 CEP126Q9P2H0 1117 aa16.88■□□□□ 0.29
SNF8-206ENST00000509989 MYO5AQ9Y4I1 1855 aaKnown RBP16.87■□□□□ 0.29
SNF8-206ENST00000509989 ANGEL2Q5VTE6 544 aaKnown RBP16.87■□□□□ 0.29
SNF8-206ENST00000509989 SIRT2Q8IXJ6 389 aa16.87■□□□□ 0.29
SNF8-206ENST00000509989 HDAC5Q9UQL6 1122 aa16.87■□□□□ 0.29
SNF8-206ENST00000509989 FAM205AQ6ZU69 1335 aa16.87■□□□□ 0.29
SNF8-206ENST00000509989 SLC5A1P13866 664 aa16.86■□□□□ 0.29
SNF8-206ENST00000509989 PHKA1P46020 1223 aa16.86■□□□□ 0.29
SNF8-206ENST00000509989 LPIN2Q92539 896 aa16.86■□□□□ 0.29
SNF8-206ENST00000509989 ZBED3Q96IU2 234 aaPredicted RBP16.86■□□□□ 0.29
SNF8-206ENST00000509989 FBXO3Q9UK99 471 aa16.86■□□□□ 0.29
SNF8-206ENST00000509989 WNT10BO00744 389 aa16.85■□□□□ 0.29
SNF8-206ENST00000509989 IFIT1P09914 478 aaKnown RBP16.85■□□□□ 0.29
SNF8-206ENST00000509989 MFSD14BQ5SR56 506 aa16.85■□□□□ 0.29
SNF8-206ENST00000509989 PRAMEF18Q5VWM3 479 aa16.85■□□□□ 0.29
SNF8-206ENST00000509989 ZC3H15Q8WU90 426 aaKnown RBP16.85■□□□□ 0.29
SNF8-206ENST00000509989 ZBTB40Q9NUA8 1239 aa16.85■□□□□ 0.29
SNF8-206ENST00000509989 MKRN1Q9UHC7 482 aaKnown RBP16.85■□□□□ 0.29
SNF8-206ENST00000509989 A0A1B0GUL7 405 aa16.84■□□□□ 0.29
SNF8-206ENST00000509989 ZNF408Q9H9D4 720 aa16.84■□□□□ 0.29
SNF8-206ENST00000509989 MYO3BQ8WXR4 1341 aa16.84■□□□□ 0.29
SNF8-206ENST00000509989 AKAP11Q9UKA4 1901 aa16.84■□□□□ 0.29
SNF8-206ENST00000509989 TMEM88BA6NKF7 163 aa16.83■□□□□ 0.28
SNF8-206ENST00000509989 SURF6O75683 361 aaKnown RBP16.83■□□□□ 0.28
SNF8-206ENST00000509989 CAVIN4Q5BKX8 364 aa16.83■□□□□ 0.28
SNF8-206ENST00000509989 CDC37L1Q7L3B6 337 aa16.83■□□□□ 0.28
SNF8-206ENST00000509989 KRT26Q7Z3Y9 468 aa16.83■□□□□ 0.28
SNF8-206ENST00000509989 VPS37DQ86XT2 251 aa16.83■□□□□ 0.28
SNF8-206ENST00000509989 XAGE2Q96GT9 111 aa16.83■□□□□ 0.28
SNF8-206ENST00000509989 PRMT6Q96LA8 375 aaPredicted RBP16.83■□□□□ 0.28
SNF8-206ENST00000509989 CREBZFQ9NS37 354 aa16.83■□□□□ 0.28
SNF8-206ENST00000509989 CELF2O95319 508 aaKnown RBP16.82■□□□□ 0.28
SNF8-206ENST00000509989 FKBP1AP62942 108 aaKnown RBP16.82■□□□□ 0.28
SNF8-206ENST00000509989 G3BP1Q13283 466 aaKnown RBP eCLIP16.82■□□□□ 0.28
SNF8-206ENST00000509989 CFAP100Q494V2 611 aa16.82■□□□□ 0.28
SNF8-206ENST00000509989 CCDC102BQ68D86 513 aa16.82■□□□□ 0.28
SNF8-206ENST00000509989 PI16Q6UXB8 463 aa16.82■□□□□ 0.28
SNF8-206ENST00000509989 KLRG1Q96E93 195 aa16.82■□□□□ 0.28
SNF8-206ENST00000509989 EXOC6BQ9Y2D4 811 aa16.82■□□□□ 0.28
SNF8-206ENST00000509989 PDE3AQ14432 1141 aa16.81■□□□□ 0.28
SNF8-206ENST00000509989 DCPSQ96C86 337 aaKnown RBP16.81■□□□□ 0.28
SNF8-206ENST00000509989 NEUROD6Q96NK8 337 aa16.81■□□□□ 0.28
SNF8-206ENST00000509989 TLR7Q9NYK1 1049 aaKnown RBP16.81■□□□□ 0.28
SNF8-206ENST00000509989 DDX19BQ9UMR2 479 aa16.81■□□□□ 0.28
SNF8-206ENST00000509989 TTF2Q9UNY4 1162 aaKnown RBP16.81■□□□□ 0.28
SNF8-206ENST00000509989 NOP58Q9Y2X3 529 aaKnown RBP16.81■□□□□ 0.28
SNF8-206ENST00000509989 MYH2Q9UKX2 1941 aa16.8■□□□□ 0.28
SNF8-206ENST00000509989 CLRN2A0PK11 232 aa16.8■□□□□ 0.28
SNF8-206ENST00000509989 FRAT2O75474 233 aaPredicted RBP16.8■□□□□ 0.28
SNF8-206ENST00000509989 MS4A1P11836 297 aa16.8■□□□□ 0.28
SNF8-206ENST00000509989 RRP1P56182 461 aaKnown RBP16.8■□□□□ 0.28
SNF8-206ENST00000509989 OGFOD1Q8N543 542 aa16.8■□□□□ 0.28
SNF8-206ENST00000509989 CDCA5Q96FF9 252 aa16.8■□□□□ 0.28
SNF8-206ENST00000509989 RASGRF1Q13972 1273 aa16.79■□□□□ 0.28
SNF8-206ENST00000509989 MOB2Q70IA6 237 aa16.79■□□□□ 0.28
SNF8-206ENST00000509989 DBNDD2Q9BQY9 259 aa16.79■□□□□ 0.28
SNF8-206ENST00000509989 HDAC9Q9UKV0 1011 aa16.79■□□□□ 0.28
SNF8-206ENST00000509989 FZD1Q9UP38 647 aa16.79■□□□□ 0.28
SNF8-206ENST00000509989 PCNTO95613 3336 aa16.78■□□□□ 0.28
SNF8-206ENST00000509989 CNTNAP1P78357 1384 aa16.78■□□□□ 0.28
SNF8-206ENST00000509989 SPDYE2BA6NHP3 402 aa16.78■□□□□ 0.28
SNF8-206ENST00000509989 SPDYE6P0CI01 402 aa16.78■□□□□ 0.28
SNF8-206ENST00000509989 PRDX5P30044 214 aa16.78■□□□□ 0.28
SNF8-206ENST00000509989 VEGFBP49765 207 aa16.78■□□□□ 0.28
SNF8-206ENST00000509989 DLGAP5Q15398 846 aa16.78■□□□□ 0.28
SNF8-206ENST00000509989 TNNI3KQ59H18 835 aa16.78■□□□□ 0.28
SNF8-206ENST00000509989 CDAN1Q8IWY9 1227 aa16.78■□□□□ 0.28
SNF8-206ENST00000509989 ABT1Q9ULW3 272 aaKnown RBP16.78■□□□□ 0.28
SNF8-206ENST00000509989 FPGT-TNNI3KV9GXZ4 949 aa16.78■□□□□ 0.28
SNF8-206ENST00000509989 APBB1O00213 710 aa16.77■□□□□ 0.28
SNF8-206ENST00000509989 CRKP46108 304 aa16.77■□□□□ 0.28
SNF8-206ENST00000509989 RBM5P52756 815 aaKnown RBP eCLIP16.77■□□□□ 0.28
SNF8-206ENST00000509989 OS9Q13438 667 aaPredicted RBP16.77■□□□□ 0.28
SNF8-206ENST00000509989 CYP4F22Q6NT55 531 aa16.77■□□□□ 0.28
SNF8-206ENST00000509989 SULF1Q8IWU6 871 aa16.77■□□□□ 0.28
SNF8-206ENST00000509989 MTMR14Q8NCE2 650 aa16.77■□□□□ 0.28
SNF8-206ENST00000509989 EAF2Q96CJ1 260 aaPredicted RBP16.77■□□□□ 0.28
SNF8-206ENST00000509989 CCDC8Q9H0W5 538 aaPredicted RBP16.77■□□□□ 0.28
SNF8-206ENST00000509989 TDRD3Q9H7E2 651 aaKnown RBP16.77■□□□□ 0.28
SNF8-206ENST00000509989 TLL2Q9Y6L7 1015 aa16.77■□□□□ 0.28
SNF8-206ENST00000509989 RASSF10A6NK89 507 aa16.76■□□□□ 0.27
SNF8-206ENST00000509989 CACNB3P54284 484 aa16.76■□□□□ 0.27
SNF8-206ENST00000509989 DIXDC1Q155Q3 683 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms