RNA–Protein interactions for RNA: ENST00000507485.1

RPS3A-206, Transcript of ribosomal protein S3A, humanhuman

TSL 1 (best)

Gene RPS3A, Length 1,526 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-206ENST00000507485 TSPYL6Q8N831 410 aa11.68□□□□□ -0.54
RPS3A-206ENST00000507485 DPF2Q92785 391 aa11.68□□□□□ -0.54
RPS3A-206ENST00000507485 MYD88Q99836 296 aa11.68□□□□□ -0.54
RPS3A-206ENST00000507485 ADM5C9JUS6 153 aa11.67□□□□□ -0.54
RPS3A-206ENST00000507485 CDC37L1Q7L3B6 337 aa11.67□□□□□ -0.54
RPS3A-206ENST00000507485 RIC3Q7Z5B4 369 aa11.67□□□□□ -0.54
RPS3A-206ENST00000507485 ZBTB38Q8NAP3 1195 aaPredicted RBP11.67□□□□□ -0.54
RPS3A-206ENST00000507485 CCDC85AQ96PX6 553 aaPredicted RBP11.67□□□□□ -0.54
RPS3A-206ENST00000507485 ADAM33Q9BZ11 813 aa11.67□□□□□ -0.54
RPS3A-206ENST00000507485 IFT57Q9NWB7 429 aa11.67□□□□□ -0.54
RPS3A-206ENST00000507485 ZNF646O15015 1829 aaPredicted RBP11.67□□□□□ -0.54
RPS3A-206ENST00000507485 CASP8AP2Q9UKL3 1982 aa11.66□□□□□ -0.54
RPS3A-206ENST00000507485 MAP2K2P36507 400 aa11.66□□□□□ -0.54
RPS3A-206ENST00000507485 RBM26Q5T8P6 1007 aaKnown RBP11.66□□□□□ -0.54
RPS3A-206ENST00000507485 HHIPL1Q96JK4 782 aa11.66□□□□□ -0.54
RPS3A-206ENST00000507485 PODXL2Q9NZ53 605 aa11.66□□□□□ -0.54
RPS3A-206ENST00000507485 PSME4Q14997 1843 aa11.66□□□□□ -0.54
RPS3A-206ENST00000507485 FAM155AB1AL88 458 aaPredicted RBP11.65□□□□□ -0.54
RPS3A-206ENST00000507485 H7C1D1 291 aa11.65□□□□□ -0.54
RPS3A-206ENST00000507485 PCCAP05165 728 aaPredicted RBP11.65□□□□□ -0.54
RPS3A-206ENST00000507485 IGKV5-2P06315 115 aa11.65□□□□□ -0.54
RPS3A-206ENST00000507485 SPEF2Q9C093 1822 aa11.65□□□□□ -0.54
RPS3A-206ENST00000507485 UFL1O94874 794 aa11.65□□□□□ -0.55
RPS3A-206ENST00000507485 VIL1P09327 827 aaKnown RBP11.65□□□□□ -0.55
RPS3A-206ENST00000507485 GNAI1P63096 354 aa11.65□□□□□ -0.55
RPS3A-206ENST00000507485 MAP3K9P80192 1104 aa11.65□□□□□ -0.55
RPS3A-206ENST00000507485 TSR2Q969E8 191 aaKnown RBP11.65□□□□□ -0.55
RPS3A-206ENST00000507485 METTL22Q9BUU2 404 aaPredicted RBP11.65□□□□□ -0.55
RPS3A-206ENST00000507485 RPS12P25398 132 aaKnown RBP11.64□□□□□ -0.55
RPS3A-206ENST00000507485 BRPF1P55201 1214 aaPredicted RBP11.64□□□□□ -0.55
RPS3A-206ENST00000507485 HUNKP57058 714 aa11.64□□□□□ -0.55
RPS3A-206ENST00000507485 KIF4BQ2VIQ3 1234 aa11.64□□□□□ -0.55
RPS3A-206ENST00000507485 KRT26Q7Z3Y9 468 aa11.64□□□□□ -0.55
RPS3A-206ENST00000507485 CCDC191Q8NCU4 936 aa11.64□□□□□ -0.55
RPS3A-206ENST00000507485 EYA3Q99504 573 aa11.64□□□□□ -0.55
RPS3A-206ENST00000507485 PDE8AO60658 829 aa11.63□□□□□ -0.55
RPS3A-206ENST00000507485 G2E3Q7L622 706 aa11.63□□□□□ -0.55
RPS3A-206ENST00000507485 ANKK1Q8NFD2 765 aa11.63□□□□□ -0.55
RPS3A-206ENST00000507485 GMLQ99445 158 aa11.63□□□□□ -0.55
RPS3A-206ENST00000507485 BEGAINQ9BUH8 593 aa11.63□□□□□ -0.55
RPS3A-206ENST00000507485 ZC3H12CQ9C0D7 883 aaKnown RBP11.63□□□□□ -0.55
RPS3A-206ENST00000507485 CWC25Q9NXE8 425 aaPredicted RBP11.63□□□□□ -0.55
RPS3A-206ENST00000507485 GGA3Q9NZ52 723 aa11.63□□□□□ -0.55
RPS3A-206ENST00000507485 SCAF8Q9UPN6 1271 aaKnown RBP11.63□□□□□ -0.55
RPS3A-206ENST00000507485 MAP3K2Q9Y2U5 619 aa11.63□□□□□ -0.55
RPS3A-206ENST00000507485 ZNF609O15014 1411 aa11.62□□□□□ -0.55
RPS3A-206ENST00000507485 DDX27Q96GQ7 796 aaKnown RBP11.62□□□□□ -0.55
RPS3A-206ENST00000507485 MCOLN1Q9GZU1 580 aa11.62□□□□□ -0.55
RPS3A-206ENST00000507485 GBA2Q9HCG7 927 aaPredicted RBP11.62□□□□□ -0.55
RPS3A-206ENST00000507485 ANKIB1Q9P2G1 1089 aa11.62□□□□□ -0.55
RPS3A-206ENST00000507485 GGA1Q9UJY5 639 aa11.62□□□□□ -0.55
RPS3A-206ENST00000507485 PI4KAP2A4QPH2 592 aa11.61□□□□□ -0.55
RPS3A-206ENST00000507485 PPP1R3GB7ZBB8 358 aa11.61□□□□□ -0.55
RPS3A-206ENST00000507485 ZNF280AP59817 542 aaPredicted RBP11.61□□□□□ -0.55
RPS3A-206ENST00000507485 CWF19L2Q2TBE0 894 aaKnown RBP11.61□□□□□ -0.55
RPS3A-206ENST00000507485 FAM161AQ3B820 660 aa11.61□□□□□ -0.55
RPS3A-206ENST00000507485 CCDC152Q4G0S7 254 aa11.61□□□□□ -0.55
RPS3A-206ENST00000507485 RGMBQ6NW40 437 aa11.61□□□□□ -0.55
RPS3A-206ENST00000507485 RSBN1LQ6PCB5 846 aaPredicted RBP11.61□□□□□ -0.55
RPS3A-206ENST00000507485 PI4KAP1Q8N8J0 262 aa11.61□□□□□ -0.55
RPS3A-206ENST00000507485 TTLL11Q8NHH1 800 aa11.61□□□□□ -0.55
RPS3A-206ENST00000507485 LARP6Q9BRS8 491 aaKnown RBP11.61□□□□□ -0.55
RPS3A-206ENST00000507485 MXD3Q9BW11 206 aa11.61□□□□□ -0.55
RPS3A-206ENST00000507485 RABGEF1Q9UJ41 708 aa11.61□□□□□ -0.55
RPS3A-206ENST00000507485 MYH3P11055 1940 aa11.61□□□□□ -0.55
RPS3A-206ENST00000507485 CCDC85CA6NKD9 419 aa11.6□□□□□ -0.55
RPS3A-206ENST00000507485 CTSWP56202 376 aa11.6□□□□□ -0.55
RPS3A-206ENST00000507485 KIF23Q02241 960 aaPredicted RBP11.6□□□□□ -0.55
RPS3A-206ENST00000507485 NOGQ13253 232 aa11.6□□□□□ -0.55
RPS3A-206ENST00000507485 ANGEL2Q5VTE6 544 aaKnown RBP11.6□□□□□ -0.55
RPS3A-206ENST00000507485 CCDC30Q5VVM6 783 aa11.6□□□□□ -0.55
RPS3A-206ENST00000507485 KSR2Q6VAB6 950 aa11.6□□□□□ -0.55
RPS3A-206ENST00000507485 TXNRD3Q86VQ6 643 aa11.6□□□□□ -0.55
RPS3A-206ENST00000507485 ANKRD18AQ8IVF6 992 aa11.6□□□□□ -0.55
RPS3A-206ENST00000507485 DCPSQ96C86 337 aaKnown RBP11.6□□□□□ -0.55
RPS3A-206ENST00000507485 CDCA5Q96FF9 252 aa11.6□□□□□ -0.55
RPS3A-206ENST00000507485 GREM2Q9H772 168 aa11.6□□□□□ -0.55
RPS3A-206ENST00000507485 XDHP47989 1333 aa11.6□□□□□ -0.55
RPS3A-206ENST00000507485 KLRK1P26718 216 aa11.6□□□□□ -0.55
RPS3A-206ENST00000507485 SCARF1Q14162 830 aa11.6□□□□□ -0.55
RPS3A-206ENST00000507485 MOB2Q70IA6 237 aa11.6□□□□□ -0.55
RPS3A-206ENST00000507485 MINPP1Q9UNW1 487 aa11.6□□□□□ -0.55
RPS3A-206ENST00000507485 NEURL1BA8MQ27 555 aa11.59□□□□□ -0.55
RPS3A-206ENST00000507485 CA12O43570 354 aa11.59□□□□□ -0.55
RPS3A-206ENST00000507485 SLC10A3P09131 477 aa11.59□□□□□ -0.55
RPS3A-206ENST00000507485 CALD1Q05682 793 aaKnown RBP11.59□□□□□ -0.55
RPS3A-206ENST00000507485 NYAP1Q6ZVC0 841 aa11.59□□□□□ -0.55
RPS3A-206ENST00000507485 AGBL3Q8NEM8 1001 aa11.59□□□□□ -0.55
RPS3A-206ENST00000507485 H7C1W4 665 aa11.58□□□□□ -0.56
RPS3A-206ENST00000507485 ATP2B4P23634 1241 aa11.58□□□□□ -0.56
RPS3A-206ENST00000507485 RGS19P49795 217 aa11.58□□□□□ -0.56
RPS3A-206ENST00000507485 ZNF157P51786 506 aaPredicted RBP11.58□□□□□ -0.56
RPS3A-206ENST00000507485 CASP7P55210 303 aa11.58□□□□□ -0.56
RPS3A-206ENST00000507485 PRAMEF18Q5VWM3 479 aa11.58□□□□□ -0.56
RPS3A-206ENST00000507485 WWC1Q8IX03 1113 aa11.58□□□□□ -0.56
RPS3A-206ENST00000507485 C2orf69Q8N8R5 385 aa11.58□□□□□ -0.56
RPS3A-206ENST00000507485 MYOZ2Q9NPC6 264 aa11.58□□□□□ -0.56
RPS3A-206ENST00000507485 MED23Q9ULK4 1368 aa11.57□□□□□ -0.56
RPS3A-206ENST00000507485 USP17L3A6NCW0 530 aa11.57□□□□□ -0.56
RPS3A-206ENST00000507485 USP17L4A6NCW7 530 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms