RNA–Protein interactions for RNA: ENST00000506080.5

PTPN20-216, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-216ENST00000506080 MYD88Q99836 296 aa11.93□□□□□ -0.5
PTPN20-216ENST00000506080 ZNF609O15014 1411 aa11.92□□□□□ -0.5
PTPN20-216ENST00000506080 USP17L3A6NCW0 530 aa11.92□□□□□ -0.5
PTPN20-216ENST00000506080 USP17L4A6NCW7 530 aa11.92□□□□□ -0.5
PTPN20-216ENST00000506080 WTIPA6NIX2 430 aaPredicted RBP11.92□□□□□ -0.5
PTPN20-216ENST00000506080 GPR25O00155 361 aa11.92□□□□□ -0.5
PTPN20-216ENST00000506080 PDE8AO60658 829 aa11.92□□□□□ -0.5
PTPN20-216ENST00000506080 HOXB1P14653 301 aaPredicted RBP11.92□□□□□ -0.5
PTPN20-216ENST00000506080 NBPF9Q3BBW0 867 aa11.92□□□□□ -0.5
PTPN20-216ENST00000506080 USP17L1Q7RTZ2 530 aa11.92□□□□□ -0.5
PTPN20-216ENST00000506080 FBXW7Q969H0 707 aa11.92□□□□□ -0.5
PTPN20-216ENST00000506080 MXD3Q9BW11 206 aa11.92□□□□□ -0.5
PTPN20-216ENST00000506080 PHAXQ9H814 394 aaKnown RBP11.92□□□□□ -0.5
PTPN20-216ENST00000506080 XDHP47989 1333 aa11.92□□□□□ -0.5
PTPN20-216ENST00000506080 HSP90B1P14625 803 aaKnown RBP11.91□□□□□ -0.5
PTPN20-216ENST00000506080 ATP2B4P23634 1241 aa11.91□□□□□ -0.5
PTPN20-216ENST00000506080 TM4SF4P48230 202 aa11.91□□□□□ -0.5
PTPN20-216ENST00000506080 PRKG1Q13976 671 aa11.91□□□□□ -0.5
PTPN20-216ENST00000506080 PODNQ7Z5L7 613 aa11.91□□□□□ -0.5
PTPN20-216ENST00000506080 ANKRD18AQ8IVF6 992 aa11.91□□□□□ -0.5
PTPN20-216ENST00000506080 PSME4Q14997 1843 aa11.9□□□□□ -0.5
PTPN20-216ENST00000506080 PCCAP05165 728 aaPredicted RBP11.9□□□□□ -0.5
PTPN20-216ENST00000506080 FBXO46Q6PJ61 603 aaPredicted RBP11.9□□□□□ -0.5
PTPN20-216ENST00000506080 RUNDC1Q96C34 613 aa11.9□□□□□ -0.5
PTPN20-216ENST00000506080 R3HDMLQ9H3Y0 253 aa11.9□□□□□ -0.5
PTPN20-216ENST00000506080 MBIPQ9NS73 344 aa11.9□□□□□ -0.5
PTPN20-216ENST00000506080 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.9□□□□□ -0.5
PTPN20-216ENST00000506080 ELL2O00472 640 aaPredicted RBP11.89□□□□□ -0.51
PTPN20-216ENST00000506080 WNT10BO00744 389 aa11.89□□□□□ -0.51
PTPN20-216ENST00000506080 FKTNO75072 461 aa11.89□□□□□ -0.51
PTPN20-216ENST00000506080 NF2P35240 595 aa11.89□□□□□ -0.51
PTPN20-216ENST00000506080 RALBP1Q15311 655 aa11.89□□□□□ -0.51
PTPN20-216ENST00000506080 CCDC191Q8NCU4 936 aa11.89□□□□□ -0.51
PTPN20-216ENST00000506080 CWC25Q9NXE8 425 aaPredicted RBP11.89□□□□□ -0.51
PTPN20-216ENST00000506080 PPP1R37O75864 691 aa11.88□□□□□ -0.51
PTPN20-216ENST00000506080 SASH1O94885 1247 aa11.88□□□□□ -0.51
PTPN20-216ENST00000506080 PTPN12Q05209 780 aaKnown RBP11.88□□□□□ -0.51
PTPN20-216ENST00000506080 SREBF2Q12772 1141 aa11.88□□□□□ -0.51
PTPN20-216ENST00000506080 DACT2Q5SW24 774 aa11.88□□□□□ -0.51
PTPN20-216ENST00000506080 OGFOD1Q8N543 542 aa11.88□□□□□ -0.51
PTPN20-216ENST00000506080 WDR43Q15061 677 aaKnown RBP eCLIP11.87□□□□□ -0.51
PTPN20-216ENST00000506080 ARMC9Q7Z3E5 817 aa11.87□□□□□ -0.51
PTPN20-216ENST00000506080 CDC5LQ99459 802 aaKnown RBP11.87□□□□□ -0.51
PTPN20-216ENST00000506080 MINPP1Q9UNW1 487 aa11.87□□□□□ -0.51
PTPN20-216ENST00000506080 FZD1Q9UP38 647 aa11.87□□□□□ -0.51
PTPN20-216ENST00000506080 MED23Q9ULK4 1368 aa11.87□□□□□ -0.51
PTPN20-216ENST00000506080 CCT4P50991 539 aaKnown RBP11.86□□□□□ -0.51
PTPN20-216ENST00000506080 NOM1Q5C9Z4 860 aaKnown RBP11.86□□□□□ -0.51
PTPN20-216ENST00000506080 METTL22Q9BUU2 404 aaPredicted RBP11.86□□□□□ -0.51
PTPN20-216ENST00000506080 ANGEL1Q9UNK9 670 aaKnown RBP11.86□□□□□ -0.51
PTPN20-216ENST00000506080 MYO3BQ8WXR4 1341 aa11.86□□□□□ -0.51
PTPN20-216ENST00000506080 CTSWP56202 376 aa11.86□□□□□ -0.51
PTPN20-216ENST00000506080 STRIP1Q5VSL9 837 aa11.86□□□□□ -0.51
PTPN20-216ENST00000506080 SPRYD7Q5W111 196 aa11.86□□□□□ -0.51
PTPN20-216ENST00000506080 TXNRD3Q86VQ6 643 aa11.86□□□□□ -0.51
PTPN20-216ENST00000506080 COA1Q9GZY4 146 aa11.86□□□□□ -0.51
PTPN20-216ENST00000506080 GREM2Q9H772 168 aa11.86□□□□□ -0.51
PTPN20-216ENST00000506080 BSDC1Q9NW68 430 aaPredicted RBP11.86□□□□□ -0.51
PTPN20-216ENST00000506080 ADAMTS8Q9UP79 889 aa11.86□□□□□ -0.51
PTPN20-216ENST00000506080 MYBBP1AQ9BQG0 1328 aaKnown RBP11.85□□□□□ -0.51
PTPN20-216ENST00000506080 C2orf72A6NCS6 295 aa11.85□□□□□ -0.51
PTPN20-216ENST00000506080 DDX58O95786 925 aaKnown RBP11.85□□□□□ -0.51
PTPN20-216ENST00000506080 ZNF853P0CG23 659 aa11.85□□□□□ -0.51
PTPN20-216ENST00000506080 TTLL5Q6EMB2 1281 aa11.85□□□□□ -0.51
PTPN20-216ENST00000506080 APOBEC3FQ8IUX4 373 aaKnown RBP11.85□□□□□ -0.51
PTPN20-216ENST00000506080 KIAA0825Q8IV33 1275 aa11.85□□□□□ -0.51
PTPN20-216ENST00000506080 SPNS2Q8IVW8 549 aa11.85□□□□□ -0.51
PTPN20-216ENST00000506080 HS6ST3Q8IZP7 471 aa11.85□□□□□ -0.51
PTPN20-216ENST00000506080 TTLL11Q8NHH1 800 aa11.85□□□□□ -0.51
PTPN20-216ENST00000506080 GCC1Q96CN9 775 aa11.85□□□□□ -0.51
PTPN20-216ENST00000506080 CFHR5Q9BXR6 569 aa11.85□□□□□ -0.51
PTPN20-216ENST00000506080 KRTAP3-3Q9BYR6 98 aa11.85□□□□□ -0.51
PTPN20-216ENST00000506080 KRTAP3-2Q9BYR7 98 aa11.85□□□□□ -0.51
PTPN20-216ENST00000506080 MAP3K2Q9Y2U5 619 aa11.85□□□□□ -0.51
PTPN20-216ENST00000506080 TRIM17Q9Y577 477 aa11.85□□□□□ -0.51
PTPN20-216ENST00000506080 SPEF2Q9C093 1822 aa11.85□□□□□ -0.51
PTPN20-216ENST00000506080 KLRK1P26718 216 aa11.84□□□□□ -0.51
PTPN20-216ENST00000506080 LDLRAD1Q5T700 205 aa11.84□□□□□ -0.51
PTPN20-216ENST00000506080 GPR153Q6NV75 609 aa11.84□□□□□ -0.51
PTPN20-216ENST00000506080 C8orf58Q8NAV2 365 aa11.84□□□□□ -0.51
PTPN20-216ENST00000506080 ZNF646O15015 1829 aaPredicted RBP11.83□□□□□ -0.52
PTPN20-216ENST00000506080 ALDH1A1P00352 501 aa11.83□□□□□ -0.52
PTPN20-216ENST00000506080 IGKV5-2P06315 115 aa11.83□□□□□ -0.52
PTPN20-216ENST00000506080 GTF2IP78347 998 aa11.83□□□□□ -0.52
PTPN20-216ENST00000506080 HABP4Q5JVS0 413 aaKnown RBP11.83□□□□□ -0.52
PTPN20-216ENST00000506080 OTOP1Q7RTM1 612 aa11.83□□□□□ -0.52
PTPN20-216ENST00000506080 SLC10A4Q96EP9 437 aa11.83□□□□□ -0.52
PTPN20-216ENST00000506080 IFT57Q9NWB7 429 aa11.83□□□□□ -0.52
PTPN20-216ENST00000506080 LEMD3Q9Y2U8 911 aa11.83□□□□□ -0.52
PTPN20-216ENST00000506080 PI4KAP2A4QPH2 592 aa11.82□□□□□ -0.52
PTPN20-216ENST00000506080 MANSC4A6NHS7 340 aaPredicted RBP11.82□□□□□ -0.52
PTPN20-216ENST00000506080 IGHMBP2P38935 993 aaKnown RBP11.82□□□□□ -0.52
PTPN20-216ENST00000506080 GNAI1P63096 354 aa11.82□□□□□ -0.52
PTPN20-216ENST00000506080 CWF19L2Q2TBE0 894 aaKnown RBP11.82□□□□□ -0.52
PTPN20-216ENST00000506080 CCDC30Q5VVM6 783 aa11.82□□□□□ -0.52
PTPN20-216ENST00000506080 PI4KAP1Q8N8J0 262 aa11.82□□□□□ -0.52
PTPN20-216ENST00000506080 CLMNQ96JQ2 1002 aa11.82□□□□□ -0.52
PTPN20-216ENST00000506080 DEFB129Q9H1M3 183 aa11.82□□□□□ -0.52
PTPN20-216ENST00000506080 ZSWIM6Q9HCJ5 1215 aa11.82□□□□□ -0.52
PTPN20-216ENST00000506080 ZNF804BA4D1E1 1349 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms