RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 TMPOP42166 694 aaKnown RBP11.78□□□□□ -0.52
DHFR-202ENST00000504396 GPSM2P81274 684 aa11.78□□□□□ -0.52
DHFR-202ENST00000504396 KIF4BQ2VIQ3 1234 aa11.78□□□□□ -0.52
DHFR-202ENST00000504396 SULF1Q8IWU6 871 aa11.78□□□□□ -0.52
DHFR-202ENST00000504396 CCDC146Q8IYE0 955 aa11.78□□□□□ -0.52
DHFR-202ENST00000504396 DPF2Q92785 391 aa11.78□□□□□ -0.52
DHFR-202ENST00000504396 CCDC102AQ96A19 550 aa11.78□□□□□ -0.52
DHFR-202ENST00000504396 ZBED2Q9BTP6 218 aa11.78□□□□□ -0.52
DHFR-202ENST00000504396 PPP1R3GB7ZBB8 358 aa11.77□□□□□ -0.52
DHFR-202ENST00000504396 TRPA1O75762 1119 aa11.77□□□□□ -0.52
DHFR-202ENST00000504396 RPS12P25398 132 aaKnown RBP11.77□□□□□ -0.52
DHFR-202ENST00000504396 SOX10P56693 466 aa11.77□□□□□ -0.52
DHFR-202ENST00000504396 KIF23Q02241 960 aaPredicted RBP11.77□□□□□ -0.52
DHFR-202ENST00000504396 C6orf132Q5T0Z8 1188 aa11.77□□□□□ -0.52
DHFR-202ENST00000504396 PLBD2Q8NHP8 589 aa11.77□□□□□ -0.52
DHFR-202ENST00000504396 GGA3Q9NZ52 723 aa11.77□□□□□ -0.52
DHFR-202ENST00000504396 POLLQ9UGP5 575 aa11.77□□□□□ -0.52
DHFR-202ENST00000504396 AKAP11Q9UKA4 1901 aa11.77□□□□□ -0.53
DHFR-202ENST00000504396 HOXB7P09629 217 aa11.77□□□□□ -0.53
DHFR-202ENST00000504396 KCNQ5Q9NR82 932 aa11.77□□□□□ -0.53
DHFR-202ENST00000504396 ANKIB1Q9P2G1 1089 aa11.77□□□□□ -0.53
DHFR-202ENST00000504396 POLR2AP24928 1970 aaKnown RBP11.76□□□□□ -0.53
DHFR-202ENST00000504396 FAM155AB1AL88 458 aaPredicted RBP11.76□□□□□ -0.53
DHFR-202ENST00000504396 IRS4O14654 1257 aaPredicted RBP11.76□□□□□ -0.53
DHFR-202ENST00000504396 UFL1O94874 794 aa11.76□□□□□ -0.53
DHFR-202ENST00000504396 RALBP1Q15311 655 aa11.76□□□□□ -0.53
DHFR-202ENST00000504396 SLC4A5Q9BY07 1137 aa11.76□□□□□ -0.53
DHFR-202ENST00000504396 ZC3H12CQ9C0D7 883 aaKnown RBP11.76□□□□□ -0.53
DHFR-202ENST00000504396 SAGE1Q9NXZ1 904 aa11.76□□□□□ -0.53
DHFR-202ENST00000504396 DBF4Q9UBU7 674 aaPredicted RBP11.76□□□□□ -0.53
DHFR-202ENST00000504396 RTL9Q8NET4 1388 aa11.76□□□□□ -0.53
DHFR-202ENST00000504396 COL4A1P02462 1669 aa11.76□□□□□ -0.53
DHFR-202ENST00000504396 MAP3K7O43318 606 aa11.75□□□□□ -0.53
DHFR-202ENST00000504396 SF3B3Q15393 1217 aaKnown RBP11.75□□□□□ -0.53
DHFR-202ENST00000504396 TBC1D16Q8TBP0 767 aa11.75□□□□□ -0.53
DHFR-202ENST00000504396 CDCA5Q96FF9 252 aa11.75□□□□□ -0.53
DHFR-202ENST00000504396 RNF186Q9NXI6 227 aa11.75□□□□□ -0.53
DHFR-202ENST00000504396 CHL1O00533 1208 aa11.74□□□□□ -0.53
DHFR-202ENST00000504396 SLC10A3P09131 477 aa11.74□□□□□ -0.53
DHFR-202ENST00000504396 RPS8P62241 208 aaKnown RBP11.74□□□□□ -0.53
DHFR-202ENST00000504396 WDR43Q15061 677 aaKnown RBP eCLIP11.74□□□□□ -0.537e-6■■■■■ 27.3
DHFR-202ENST00000504396 TSR1Q2NL82 804 aaKnown RBP11.74□□□□□ -0.53
DHFR-202ENST00000504396 ANGEL2Q5VTE6 544 aaKnown RBP11.74□□□□□ -0.53
DHFR-202ENST00000504396 RIC3Q7Z5B4 369 aa11.74□□□□□ -0.53
DHFR-202ENST00000504396 CCDC85AQ96PX6 553 aaPredicted RBP11.74□□□□□ -0.53
DHFR-202ENST00000504396 ISCA1Q9BUE6 129 aa11.74□□□□□ -0.53
DHFR-202ENST00000504396 GGA1Q9UJY5 639 aa11.74□□□□□ -0.53
DHFR-202ENST00000504396 ASTN2O75129 1339 aaPredicted RBP11.74□□□□□ -0.53
DHFR-202ENST00000504396 SCN9AQ15858 1988 aa11.73□□□□□ -0.53
DHFR-202ENST00000504396 HSP90B1P14625 803 aaKnown RBP11.73□□□□□ -0.53
DHFR-202ENST00000504396 PROX2Q3B8N5 592 aa11.73□□□□□ -0.53
DHFR-202ENST00000504396 HYPKQ9NX55 129 aa11.73□□□□□ -0.53
DHFR-202ENST00000504396 SCARF1Q14162 830 aa11.72□□□□□ -0.53
DHFR-202ENST00000504396 TTLL12Q14166 644 aaPredicted RBP11.72□□□□□ -0.53
DHFR-202ENST00000504396 SEC31BQ9NQW1 1179 aa11.72□□□□□ -0.53
DHFR-202ENST00000504396 PAPPA2Q9BXP8 1791 aa11.72□□□□□ -0.53
DHFR-202ENST00000504396 VIL1P09327 827 aaKnown RBP11.71□□□□□ -0.53
DHFR-202ENST00000504396 OSBPP22059 807 aa11.71□□□□□ -0.53
DHFR-202ENST00000504396 TRIM28Q13263 835 aaKnown RBP11.71□□□□□ -0.53
DHFR-202ENST00000504396 CCDC152Q4G0S7 254 aa11.71□□□□□ -0.53
DHFR-202ENST00000504396 DUSP27Q5VZP5 1158 aa11.71□□□□□ -0.53
DHFR-202ENST00000504396 RSBN1LQ6PCB5 846 aaPredicted RBP11.71□□□□□ -0.53
DHFR-202ENST00000504396 CTU1Q7Z7A3 348 aaKnown RBP11.71□□□□□ -0.53
DHFR-202ENST00000504396 RASAL3Q86YV0 1011 aa11.71□□□□□ -0.53
DHFR-202ENST00000504396 CSRNP1Q96S65 589 aa11.71□□□□□ -0.53
DHFR-202ENST00000504396 MYD88Q99836 296 aa11.71□□□□□ -0.53
DHFR-202ENST00000504396 HDAC9Q9UKV0 1011 aa11.71□□□□□ -0.53
DHFR-202ENST00000504396 SCAF8Q9UPN6 1271 aaKnown RBP11.71□□□□□ -0.53
DHFR-202ENST00000504396 PSME4Q14997 1843 aa11.71□□□□□ -0.54
DHFR-202ENST00000504396 ZNF609O15014 1411 aa11.7□□□□□ -0.54
DHFR-202ENST00000504396 MLLT3P42568 568 aaPredicted RBP11.7□□□□□ -0.54
DHFR-202ENST00000504396 ZBTB38Q8NAP3 1195 aaPredicted RBP11.7□□□□□ -0.54
DHFR-202ENST00000504396 AGBL3Q8NEM8 1001 aa11.7□□□□□ -0.54
DHFR-202ENST00000504396 JARID2Q92833 1246 aaPredicted RBP11.7□□□□□ -0.54
DHFR-202ENST00000504396 RUNDC1Q96C34 613 aa11.7□□□□□ -0.54
DHFR-202ENST00000504396 SPEF2Q9C093 1822 aa11.7□□□□□ -0.54
DHFR-202ENST00000504396 USP17L8P0C7I0 530 aa11.69□□□□□ -0.54
DHFR-202ENST00000504396 ANKRD18AQ8IVF6 992 aa11.69□□□□□ -0.54
DHFR-202ENST00000504396 MYOZ2Q9NPC6 264 aa11.69□□□□□ -0.54
DHFR-202ENST00000504396 PODXL2Q9NZ53 605 aa11.69□□□□□ -0.54
DHFR-202ENST00000504396 MYBBP1AQ9BQG0 1328 aaKnown RBP11.69□□□□□ -0.54
DHFR-202ENST00000504396 BHMG1C9JSJ3 638 aaPredicted RBP11.69□□□□□ -0.54
DHFR-202ENST00000504396 ELL2O00472 640 aaPredicted RBP11.69□□□□□ -0.54
DHFR-202ENST00000504396 ZNF280AP59817 542 aaPredicted RBP11.69□□□□□ -0.54
DHFR-202ENST00000504396 FKBP1BP68106 108 aa11.69□□□□□ -0.54
DHFR-202ENST00000504396 MOB2Q70IA6 237 aa11.69□□□□□ -0.54
DHFR-202ENST00000504396 CHMP4AQ9BY43 222 aa11.69□□□□□ -0.54
DHFR-202ENST00000504396 PHAXQ9H814 394 aaKnown RBP11.69□□□□□ -0.54
DHFR-202ENST00000504396 MBIPQ9NS73 344 aa11.69□□□□□ -0.54
DHFR-202ENST00000504396 XDHP47989 1333 aa11.68□□□□□ -0.54
DHFR-202ENST00000504396 USP17L3A6NCW0 530 aa11.68□□□□□ -0.54
DHFR-202ENST00000504396 USP17L4A6NCW7 530 aa11.68□□□□□ -0.54
DHFR-202ENST00000504396 UBE2Q2LH0YL09 131 aa11.68□□□□□ -0.54
DHFR-202ENST00000504396 PDE8AO60658 829 aa11.68□□□□□ -0.54
DHFR-202ENST00000504396 TBC1D8O95759 1140 aa11.68□□□□□ -0.54
DHFR-202ENST00000504396 NF2P35240 595 aa11.68□□□□□ -0.54
DHFR-202ENST00000504396 PRAMEF18Q5VWM3 479 aa11.68□□□□□ -0.54
DHFR-202ENST00000504396 USP17L1Q7RTZ2 530 aa11.68□□□□□ -0.54
DHFR-202ENST00000504396 CWC25Q9NXE8 425 aaPredicted RBP11.68□□□□□ -0.54
DHFR-202ENST00000504396 HPS5Q9UPZ3 1129 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms