RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 A0A1B0GUL6 1792 aa9.75□□□□□ -0.85
TOPBP1-202ENST00000503338 COL4A1P02462 1669 aa9.75□□□□□ -0.85
TOPBP1-202ENST00000503338 IDH1O75874 414 aaKnown RBP9.75□□□□□ -0.85
TOPBP1-202ENST00000503338 SLC9C2Q5TAH2 1124 aa9.75□□□□□ -0.85
TOPBP1-202ENST00000503338 SOGA3Q5TF21 947 aa9.75□□□□□ -0.85
TOPBP1-202ENST00000503338 DPP8Q6V1X1 898 aaPredicted RBP9.75□□□□□ -0.85
TOPBP1-202ENST00000503338 SUPT20HQ8NEM7 779 aa9.75□□□□□ -0.85
TOPBP1-202ENST00000503338 TDRD7Q8NHU6 1098 aaKnown RBP9.75□□□□□ -0.85
TOPBP1-202ENST00000503338 TBC1D16Q8TBP0 767 aa9.75□□□□□ -0.85
TOPBP1-202ENST00000503338 MAP4K1Q92918 833 aa9.75□□□□□ -0.85
TOPBP1-202ENST00000503338 SNX21Q969T3 373 aa9.75□□□□□ -0.85
TOPBP1-202ENST00000503338 COA1Q9GZY4 146 aa9.75□□□□□ -0.85
TOPBP1-202ENST00000503338 LRP2BPQ9P2M1 347 aa9.75□□□□□ -0.85
TOPBP1-202ENST00000503338 CTNNA3Q9UI47 895 aa9.75□□□□□ -0.85
TOPBP1-202ENST00000503338 NDUFB9Q9Y6M9 179 aa9.75□□□□□ -0.85
TOPBP1-202ENST00000503338 SALL1Q9NSC2 1324 aa9.75□□□□□ -0.85
TOPBP1-202ENST00000503338 IRS2Q9Y4H2 1338 aa9.75□□□□□ -0.85
TOPBP1-202ENST00000503338 AKAP11Q9UKA4 1901 aa9.74□□□□□ -0.85
TOPBP1-202ENST00000503338 LRRC37AA6NMS7 1700 aa9.74□□□□□ -0.85
TOPBP1-202ENST00000503338 C6orf229H3BNL8 230 aa9.74□□□□□ -0.85
TOPBP1-202ENST00000503338 ST18O60284 1047 aa9.74□□□□□ -0.85
TOPBP1-202ENST00000503338 IL1R1P14778 569 aa9.74□□□□□ -0.85
TOPBP1-202ENST00000503338 PDE6AP16499 860 aa9.74□□□□□ -0.85
TOPBP1-202ENST00000503338 GNAT2P19087 354 aa9.74□□□□□ -0.85
TOPBP1-202ENST00000503338 MCM2P49736 904 aa9.74□□□□□ -0.85
TOPBP1-202ENST00000503338 KRT32Q14532 448 aa9.74□□□□□ -0.85
TOPBP1-202ENST00000503338 PRPF40BQ6NWY9 871 aaKnown RBP9.74□□□□□ -0.85
TOPBP1-202ENST00000503338 PI16Q6UXB8 463 aa9.74□□□□□ -0.85
TOPBP1-202ENST00000503338 ERICH6Q7L0X2 663 aa9.74□□□□□ -0.85
TOPBP1-202ENST00000503338 CERS3Q8IU89 383 aa9.74□□□□□ -0.85
TOPBP1-202ENST00000503338 HSCBQ8IWL3 235 aa9.74□□□□□ -0.85
TOPBP1-202ENST00000503338 TTLL6Q8N841 843 aa9.74□□□□□ -0.85
TOPBP1-202ENST00000503338 TBC1D22AQ8WUA7 517 aa9.74□□□□□ -0.85
TOPBP1-202ENST00000503338 KCNB2Q92953 911 aa9.74□□□□□ -0.85
TOPBP1-202ENST00000503338 ZC3H12CQ9C0D7 883 aaKnown RBP9.74□□□□□ -0.85
TOPBP1-202ENST00000503338 PIH1D3Q9NQM4 214 aaKnown RBP9.74□□□□□ -0.85
TOPBP1-202ENST00000503338 DUOX1Q9NRD9 1551 aa9.74□□□□□ -0.85
TOPBP1-202ENST00000503338 TAF1P21675 1872 aa9.74□□□□□ -0.85
TOPBP1-202ENST00000503338 RPAP1Q9BWH6 1393 aaPredicted RBP9.74□□□□□ -0.85
TOPBP1-202ENST00000503338 PSMA5P28066 241 aa9.73□□□□□ -0.85
TOPBP1-202ENST00000503338 R3HDM1Q15032 1099 aaKnown RBP9.73□□□□□ -0.85
TOPBP1-202ENST00000503338 NECTIN1Q15223 517 aa9.73□□□□□ -0.85
TOPBP1-202ENST00000503338 TSGA10IPQ3SY00 556 aa9.73□□□□□ -0.85
TOPBP1-202ENST00000503338 ZNF589Q86UQ0 364 aaPredicted RBP9.73□□□□□ -0.85
TOPBP1-202ENST00000503338 RTKN2Q8IZC4 609 aa9.73□□□□□ -0.85
TOPBP1-202ENST00000503338 OSBP2Q969R2 916 aa9.73□□□□□ -0.85
TOPBP1-202ENST00000503338 AIDAQ96BJ3 306 aa9.73□□□□□ -0.85
TOPBP1-202ENST00000503338 RTFDC1Q9BY42 306 aaPredicted RBP9.73□□□□□ -0.85
TOPBP1-202ENST00000503338 PDGFDQ9GZP0 370 aaPredicted RBP9.73□□□□□ -0.85
TOPBP1-202ENST00000503338 VPS33BQ9H267 617 aa9.73□□□□□ -0.85
TOPBP1-202ENST00000503338 IL25Q9H293 177 aa9.73□□□□□ -0.85
TOPBP1-202ENST00000503338 CD209Q9NNX6 404 aa9.73□□□□□ -0.85
TOPBP1-202ENST00000503338 ABCF2Q9UG63 623 aa9.73□□□□□ -0.85
TOPBP1-202ENST00000503338 POLLQ9UGP5 575 aa9.73□□□□□ -0.85
TOPBP1-202ENST00000503338 SUGT1Q9Y2Z0 365 aa9.73□□□□□ -0.85
TOPBP1-202ENST00000503338 RBM8AQ9Y5S9 174 aaKnown RBP9.73□□□□□ -0.85
TOPBP1-202ENST00000503338 MAST3O60307 1309 aa9.73□□□□□ -0.85
TOPBP1-202ENST00000503338 ZNF532Q9HCE3 1301 aa9.73□□□□□ -0.85
TOPBP1-202ENST00000503338 TCRBV5S4A2TA0A5A2 114 aa9.72□□□□□ -0.85
TOPBP1-202ENST00000503338 G3V3G9 751 aa9.72□□□□□ -0.85
TOPBP1-202ENST00000503338 ZBTB7AO95365 584 aa9.72□□□□□ -0.85
TOPBP1-202ENST00000503338 CHRNA5P30532 468 aa9.72□□□□□ -0.85
TOPBP1-202ENST00000503338 GSTO1P78417 241 aa9.72□□□□□ -0.85
TOPBP1-202ENST00000503338 DCAF8Q5TAQ9 597 aa9.72□□□□□ -0.85
TOPBP1-202ENST00000503338 SLF2Q8IX21 1173 aa9.72□□□□□ -0.85
TOPBP1-202ENST00000503338 MAGEB6Q8N7X4 407 aa9.72□□□□□ -0.85
TOPBP1-202ENST00000503338 C7orf43Q8WVR3 580 aa9.72□□□□□ -0.85
TOPBP1-202ENST00000503338 KIF2CQ99661 725 aa9.72□□□□□ -0.85
TOPBP1-202ENST00000503338 TM6SF1Q9BZW5 370 aa9.72□□□□□ -0.85
TOPBP1-202ENST00000503338 RAI14Q9P0K7 980 aa9.72□□□□□ -0.85
TOPBP1-202ENST00000503338 CD2APQ9Y5K6 639 aa9.72□□□□□ -0.85
TOPBP1-202ENST00000503338 COL11A2P13942 1736 aaPredicted RBP9.71□□□□□ -0.85
TOPBP1-202ENST00000503338 GPAA1O43292 621 aa9.71□□□□□ -0.86
TOPBP1-202ENST00000503338 LDHCP07864 332 aa9.71□□□□□ -0.86
TOPBP1-202ENST00000503338 HSPD1P10809 573 aaKnown RBP9.71□□□□□ -0.86
TOPBP1-202ENST00000503338 KLRK1P26718 216 aa9.71□□□□□ -0.86
TOPBP1-202ENST00000503338 PTH1RQ03431 593 aa9.71□□□□□ -0.86
TOPBP1-202ENST00000503338 CCDC93Q567U6 631 aa9.71□□□□□ -0.86
TOPBP1-202ENST00000503338 CREB3L3Q68CJ9 461 aa9.71□□□□□ -0.86
TOPBP1-202ENST00000503338 NAA16Q6N069 864 aaPredicted RBP9.71□□□□□ -0.86
TOPBP1-202ENST00000503338 PODNQ7Z5L7 613 aa9.71□□□□□ -0.86
TOPBP1-202ENST00000503338 TXNRD3Q86VQ6 643 aa9.71□□□□□ -0.86
TOPBP1-202ENST00000503338 NACAP1Q9BZK3 213 aa9.71□□□□□ -0.86
TOPBP1-202ENST00000503338 PIM2Q9P1W9 311 aa9.71□□□□□ -0.86
TOPBP1-202ENST00000503338 WWC3Q9ULE0 1092 aa9.71□□□□□ -0.86
TOPBP1-202ENST00000503338 IQSEC3Q9UPP2 1182 aaPredicted RBP9.71□□□□□ -0.86
TOPBP1-202ENST00000503338 ZMYM6O95789 1325 aa9.71□□□□□ -0.86
TOPBP1-202ENST00000503338 FAM205AQ6ZU69 1335 aa9.71□□□□□ -0.86
TOPBP1-202ENST00000503338 WTIPA6NIX2 430 aaPredicted RBP9.7□□□□□ -0.86
TOPBP1-202ENST00000503338 M0R2C6 588 aa9.7□□□□□ -0.86
TOPBP1-202ENST00000503338 SLC27A2O14975 620 aa9.7□□□□□ -0.86
TOPBP1-202ENST00000503338 LDHBP07195 334 aaKnown RBP9.7□□□□□ -0.86
TOPBP1-202ENST00000503338 HMGB1P09429 215 aaKnown RBP9.7□□□□□ -0.86
TOPBP1-202ENST00000503338 CYP7A1P22680 504 aa9.7□□□□□ -0.86
TOPBP1-202ENST00000503338 CHAF1AQ13111 956 aaPredicted RBP9.7□□□□□ -0.86
TOPBP1-202ENST00000503338 ALX1Q15699 326 aa9.7□□□□□ -0.86
TOPBP1-202ENST00000503338 IMMTQ16891 758 aaKnown RBP9.7□□□□□ -0.86
TOPBP1-202ENST00000503338 DZIP1Q86YF9 867 aaKnown RBP9.7□□□□□ -0.86
TOPBP1-202ENST00000503338 SEC62Q99442 399 aaKnown RBP9.7□□□□□ -0.86
TOPBP1-202ENST00000503338 PSMD1Q99460 953 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms