RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 EDC3Q96F86 508 aaKnown RBP24.83■■□□□ 1.57
CDC42SE2-206ENST00000503291 AKAP11Q9UKA4 1901 aa24.83■■□□□ 1.57
CDC42SE2-206ENST00000503291 GPR162Q16538 588 aa24.83■■□□□ 1.56
CDC42SE2-206ENST00000503291 TRIM6-TRIM34B2RNG4 842 aa24.82■■□□□ 1.56
CDC42SE2-206ENST00000503291 ZBTB22O15209 634 aa24.82■■□□□ 1.56
CDC42SE2-206ENST00000503291 PODNQ7Z5L7 613 aa24.82■■□□□ 1.56
CDC42SE2-206ENST00000503291 SDSP20132 328 aa24.81■■□□□ 1.56
CDC42SE2-206ENST00000503291 PAG1Q9NWQ8 432 aa24.81■■□□□ 1.56
CDC42SE2-206ENST00000503291 GOLIM4O00461 696 aa24.81■■□□□ 1.56
CDC42SE2-206ENST00000503291 ECE2O60344 883 aa24.81■■□□□ 1.56
CDC42SE2-206ENST00000503291 RILPL2Q969X0 211 aa24.81■■□□□ 1.56
CDC42SE2-206ENST00000503291 ANTXR1Q9H6X2 564 aa24.81■■□□□ 1.56
CDC42SE2-206ENST00000503291 COL1A1P02452 1464 aaPredicted RBP24.8■■□□□ 1.56
CDC42SE2-206ENST00000503291 CYP2E1P05181 493 aaPredicted RBP24.8■■□□□ 1.56
CDC42SE2-206ENST00000503291 PRELPP51888 382 aa24.8■■□□□ 1.56
CDC42SE2-206ENST00000503291 CHAF1AQ13111 956 aaPredicted RBP24.79■■□□□ 1.56
CDC42SE2-206ENST00000503291 JAG2Q9Y219 1238 aa24.79■■□□□ 1.56
CDC42SE2-206ENST00000503291 CHD4Q14839 1912 aa24.79■■□□□ 1.56
CDC42SE2-206ENST00000503291 CNTROBQ8N137 903 aa24.79■■□□□ 1.56
CDC42SE2-206ENST00000503291 EVI5LQ96CN4 794 aa24.79■■□□□ 1.56
CDC42SE2-206ENST00000503291 TBC1D9Q6ZT07 1266 aa24.78■■□□□ 1.56
CDC42SE2-206ENST00000503291 KCNQ5Q9NR82 932 aa24.78■■□□□ 1.56
CDC42SE2-206ENST00000503291 PDS5AQ29RF7 1337 aaKnown RBP24.78■■□□□ 1.56
CDC42SE2-206ENST00000503291 COL4A5P29400 1685 aa24.78■■□□□ 1.56
CDC42SE2-206ENST00000503291 NIM1KQ8IY84 436 aa24.78■■□□□ 1.56
CDC42SE2-206ENST00000503291 MYH13Q9UKX3 1938 aa24.77■■□□□ 1.56
CDC42SE2-206ENST00000503291 GTF2IP78347 998 aa24.77■■□□□ 1.56
CDC42SE2-206ENST00000503291 JDP2Q8WYK2 163 aa24.77■■□□□ 1.56
CDC42SE2-206ENST00000503291 YDJCA8MPS7 323 aa24.76■■□□□ 1.55
CDC42SE2-206ENST00000503291 TTF1Q15361 905 aaPredicted RBP24.76■■□□□ 1.55
CDC42SE2-206ENST00000503291 TTLL5Q6EMB2 1281 aa24.76■■□□□ 1.55
CDC42SE2-206ENST00000503291 GRIN3BO60391 1043 aa24.76■■□□□ 1.55
CDC42SE2-206ENST00000503291 LMNB1P20700 586 aa24.76■■□□□ 1.55
CDC42SE2-206ENST00000503291 WDR66Q8TBY9 1149 aa24.76■■□□□ 1.55
CDC42SE2-206ENST00000503291 PIH1D3Q9NQM4 214 aaKnown RBP24.76■■□□□ 1.55
CDC42SE2-206ENST00000503291 ZNRF3Q9ULT6 936 aa24.76■■□□□ 1.55
CDC42SE2-206ENST00000503291 FAM205AQ6ZU69 1335 aa24.76■■□□□ 1.55
CDC42SE2-206ENST00000503291 KBTBD3Q8NAB2 608 aa24.75■■□□□ 1.55
CDC42SE2-206ENST00000503291 ABCF2Q9UG63 623 aa24.75■■□□□ 1.55
CDC42SE2-206ENST00000503291 CCDC88AQ3V6T2 1871 aa24.74■■□□□ 1.55
CDC42SE2-206ENST00000503291 FBXW7Q969H0 707 aa24.74■■□□□ 1.55
CDC42SE2-206ENST00000503291 FSD1Q9BTV5 496 aa24.74■■□□□ 1.55
CDC42SE2-206ENST00000503291 SCN9AQ15858 1988 aa24.73■■□□□ 1.55
CDC42SE2-206ENST00000503291 STRIP1Q5VSL9 837 aa24.73■■□□□ 1.55
CDC42SE2-206ENST00000503291 SALL1Q9NSC2 1324 aa24.73■■□□□ 1.55
CDC42SE2-206ENST00000503291 LRP2BPQ9P2M1 347 aa24.73■■□□□ 1.55
CDC42SE2-206ENST00000503291 USP17L3A6NCW0 530 aa24.72■■□□□ 1.55
CDC42SE2-206ENST00000503291 USP17L4A6NCW7 530 aa24.72■■□□□ 1.55
CDC42SE2-206ENST00000503291 IDH1O75874 414 aaKnown RBP24.72■■□□□ 1.55
CDC42SE2-206ENST00000503291 USP17L1Q7RTZ2 530 aa24.72■■□□□ 1.55
CDC42SE2-206ENST00000503291 TBC1D22AQ8WUA7 517 aa24.72■■□□□ 1.55
CDC42SE2-206ENST00000503291 MFSD14BQ5SR56 506 aa24.71■■□□□ 1.55
CDC42SE2-206ENST00000503291 ZGPATQ8N5A5 531 aaKnown RBP24.71■■□□□ 1.55
CDC42SE2-206ENST00000503291 SBF1O95248 1867 aa24.71■■□□□ 1.55
CDC42SE2-206ENST00000503291 RAD17O75943 681 aa24.71■■□□□ 1.55
CDC42SE2-206ENST00000503291 AK9Q5TCS8 1911 aa24.7■■□□□ 1.55
CDC42SE2-206ENST00000503291 DACT2Q5SW24 774 aa24.7■■□□□ 1.54
CDC42SE2-206ENST00000503291 MXD3Q9BW11 206 aa24.7■■□□□ 1.54
CDC42SE2-206ENST00000503291 MYO5AQ9Y4I1 1855 aaKnown RBP24.7■■□□□ 1.54
CDC42SE2-206ENST00000503291 PRDX5P30044 214 aa24.69■■□□□ 1.54
CDC42SE2-206ENST00000503291 ERICH6Q7L0X2 663 aa24.69■■□□□ 1.54
CDC42SE2-206ENST00000503291 CXCL9Q07325 125 aa24.69■■□□□ 1.54
CDC42SE2-206ENST00000503291 MAP3K12Q12852 859 aa24.69■■□□□ 1.54
CDC42SE2-206ENST00000503291 GRIK5Q16478 980 aa24.69■■□□□ 1.54
CDC42SE2-206ENST00000503291 SPTY2D1Q68D10 685 aaPredicted RBP24.69■■□□□ 1.54
CDC42SE2-206ENST00000503291 CERS5Q8N5B7 392 aa24.69■■□□□ 1.54
CDC42SE2-206ENST00000503291 RAI14Q9P0K7 980 aa24.69■■□□□ 1.54
CDC42SE2-206ENST00000503291 FZD9O00144 591 aa24.68■■□□□ 1.54
CDC42SE2-206ENST00000503291 CHGBP05060 677 aa24.68■■□□□ 1.54
CDC42SE2-206ENST00000503291 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.68■■□□□ 1.54
CDC42SE2-206ENST00000503291 RNF181Q9P0P0 153 aa24.68■■□□□ 1.54
CDC42SE2-206ENST00000503291 LDHBP07195 334 aaKnown RBP24.68■■□□□ 1.54
CDC42SE2-206ENST00000503291 SLC9C2Q5TAH2 1124 aa24.68■■□□□ 1.54
CDC42SE2-206ENST00000503291 PSMD14O00487 310 aa24.67■■□□□ 1.54
CDC42SE2-206ENST00000503291 VIL1P09327 827 aaKnown RBP24.67■■□□□ 1.54
CDC42SE2-206ENST00000503291 FKBP1AP62942 108 aaKnown RBP24.67■■□□□ 1.54
CDC42SE2-206ENST00000503291 DICER1Q9UPY3 1922 aaKnown RBP24.67■■□□□ 1.54
CDC42SE2-206ENST00000503291 CDC45O75419 566 aa24.66■■□□□ 1.54
CDC42SE2-206ENST00000503291 CHMLP26374 656 aa24.66■■□□□ 1.54
CDC42SE2-206ENST00000503291 LRRFIP1Q32MZ4 808 aaKnown RBP24.66■■□□□ 1.54
CDC42SE2-206ENST00000503291 C9orf131Q5VYM1 1079 aa24.66■■□□□ 1.54
CDC42SE2-206ENST00000503291 TICAM2Q86XR7 235 aa24.66■■□□□ 1.54
CDC42SE2-206ENST00000503291 EIF6P56537 245 aaKnown RBP24.66■■□□□ 1.54
CDC42SE2-206ENST00000503291 SLFNL1Q499Z3 407 aa24.66■■□□□ 1.54
CDC42SE2-206ENST00000503291 CIAPIN1Q6FI81 312 aa24.66■■□□□ 1.54
CDC42SE2-206ENST00000503291 ZSCAN25Q6NSZ9 544 aa24.66■■□□□ 1.54
CDC42SE2-206ENST00000503291 DOCK2Q92608 1830 aa24.66■■□□□ 1.54
CDC42SE2-206ENST00000503291 RNF113AO15541 343 aaKnown RBP24.65■■□□□ 1.54
CDC42SE2-206ENST00000503291 MAGEB6Q8N7X4 407 aa24.65■■□□□ 1.54
CDC42SE2-206ENST00000503291 DIAPH3Q9NSV4 1193 aa24.65■■□□□ 1.54
CDC42SE2-206ENST00000503291 SUGT1Q9Y2Z0 365 aa24.65■■□□□ 1.54
CDC42SE2-206ENST00000503291 RFX7Q2KHR2 1363 aa24.64■■□□□ 1.54
CDC42SE2-206ENST00000503291 HIP1O00291 1037 aa24.64■■□□□ 1.54
CDC42SE2-206ENST00000503291 ZFYP08048 801 aaPredicted RBP24.64■■□□□ 1.54
CDC42SE2-206ENST00000503291 PDE6AP16499 860 aa24.64■■□□□ 1.54
CDC42SE2-206ENST00000503291 ADD2P35612 726 aa24.64■■□□□ 1.54
CDC42SE2-206ENST00000503291 MECOMQ03112 1051 aa24.64■■□□□ 1.54
CDC42SE2-206ENST00000503291 ZNF384Q8TF68 577 aa24.64■■□□□ 1.54
CDC42SE2-206ENST00000503291 NSUN4Q96CB9 384 aaKnown RBP24.64■■□□□ 1.54
CDC42SE2-206ENST00000503291 PSME4Q14997 1843 aa24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms