RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 TESPA1A2RU30 521 aaPredicted RBP20.11■□□□□ 0.81
HDAC6-236ENST00000498808 PI4KAP2A4QPH2 592 aa20.11■□□□□ 0.81
HDAC6-236ENST00000498808 USP2O75604 605 aaPredicted RBP20.11■□□□□ 0.81
HDAC6-236ENST00000498808 CWF19L2Q2TBE0 894 aaKnown RBP20.11■□□□□ 0.81
HDAC6-236ENST00000498808 OTUD7BQ6GQQ9 843 aa20.11■□□□□ 0.81
HDAC6-236ENST00000498808 KSR2Q6VAB6 950 aa20.11■□□□□ 0.81
HDAC6-236ENST00000498808 PI4KAP1Q8N8J0 262 aa20.11■□□□□ 0.81
HDAC6-236ENST00000498808 ANKRD2Q9GZV1 360 aa20.11■□□□□ 0.81
HDAC6-236ENST00000498808 CEP290O15078 2479 aa20.11■□□□□ 0.81
HDAC6-236ENST00000498808 MYBBP1AQ9BQG0 1328 aaKnown RBP20.1■□□□□ 0.81
HDAC6-236ENST00000498808 IRS2Q9Y4H2 1338 aa20.1■□□□□ 0.81
HDAC6-236ENST00000498808 WDR43Q15061 677 aaKnown RBP eCLIP20.1■□□□□ 0.81
HDAC6-236ENST00000498808 SUPT20HL1Q3ZLR7 823 aa20.1■□□□□ 0.81
HDAC6-236ENST00000498808 TMEM106CQ9BVX2 250 aa20.1■□□□□ 0.81
HDAC6-236ENST00000498808 SPDYE2BA6NHP3 402 aa20.09■□□□□ 0.81
HDAC6-236ENST00000498808 NEURL1BA8MQ27 555 aa20.09■□□□□ 0.81
HDAC6-236ENST00000498808 SNAP23O00161 211 aa20.09■□□□□ 0.81
HDAC6-236ENST00000498808 SPDYE6P0CI01 402 aa20.09■□□□□ 0.81
HDAC6-236ENST00000498808 ITGA6P23229 1130 aa20.09■□□□□ 0.81
HDAC6-236ENST00000498808 IREB2P48200 963 aaKnown RBP20.09■□□□□ 0.81
HDAC6-236ENST00000498808 GNAI1P63096 354 aa20.09■□□□□ 0.81
HDAC6-236ENST00000498808 CFAP100Q494V2 611 aa20.09■□□□□ 0.81
HDAC6-236ENST00000498808 CCDC30Q5VVM6 783 aa20.09■□□□□ 0.81
HDAC6-236ENST00000498808 UBE3BQ7Z3V4 1068 aa20.09■□□□□ 0.81
HDAC6-236ENST00000498808 PRMT6Q96LA8 375 aaPredicted RBP20.09■□□□□ 0.81
HDAC6-236ENST00000498808 F8W031 263 aaPredicted RBP20.08■□□□□ 0.81
HDAC6-236ENST00000498808 H7C1W4 665 aa20.08■□□□□ 0.81
HDAC6-236ENST00000498808 CHRNDQ07001 517 aa20.08■□□□□ 0.81
HDAC6-236ENST00000498808 ANKRD13AQ8IZ07 590 aa20.08■□□□□ 0.81
HDAC6-236ENST00000498808 VEZTQ9HBM0 779 aa20.08■□□□□ 0.81
HDAC6-236ENST00000498808 PTCH2Q9Y6C5 1203 aa20.08■□□□□ 0.81
HDAC6-236ENST00000498808 KCNJ4P48050 445 aa20.07■□□□□ 0.8
HDAC6-236ENST00000498808 MS4A4AQ96JQ5 239 aa20.07■□□□□ 0.8
HDAC6-236ENST00000498808 MPHOSPH8Q99549 860 aa20.07■□□□□ 0.8
HDAC6-236ENST00000498808 PLA2G12BQ9BX93 195 aa20.07■□□□□ 0.8
HDAC6-236ENST00000498808 A0A1B0GUL6 1792 aa20.07■□□□□ 0.8
HDAC6-236ENST00000498808 SZT2Q5T011 3432 aa20.07■□□□□ 0.8
HDAC6-236ENST00000498808 MYO1BO43795 1136 aa20.06■□□□□ 0.8
HDAC6-236ENST00000498808 NEXNQ0ZGT2 675 aa20.06■□□□□ 0.8
HDAC6-236ENST00000498808 RASA3Q14644 834 aa20.06■□□□□ 0.8
HDAC6-236ENST00000498808 SLC9C1Q4G0N8 1177 aa20.06■□□□□ 0.8
HDAC6-236ENST00000498808 TSPYL6Q8N831 410 aa20.06■□□□□ 0.8
HDAC6-236ENST00000498808 OPTNQ96CV9 577 aa20.06■□□□□ 0.8
HDAC6-236ENST00000498808 ELP3Q9H9T3 547 aa20.06■□□□□ 0.8
HDAC6-236ENST00000498808 H0YGN5 161 aa20.05■□□□□ 0.8
HDAC6-236ENST00000498808 C15orf52Q6ZUT6 534 aaKnown RBP20.05■□□□□ 0.8
HDAC6-236ENST00000498808 BRI3BPQ8WY22 251 aa20.05■□□□□ 0.8
HDAC6-236ENST00000498808 OTUD5Q96G74 571 aa20.05■□□□□ 0.8
HDAC6-236ENST00000498808 ZSWIM8A7E2V4 1837 aa20.04■□□□□ 0.8
HDAC6-236ENST00000498808 TAF5LO75529 589 aa20.04■□□□□ 0.8
HDAC6-236ENST00000498808 CSF1RP07333 972 aa20.04■□□□□ 0.8
HDAC6-236ENST00000498808 CASP7P55210 303 aa20.04■□□□□ 0.8
HDAC6-236ENST00000498808 SLC4A8Q2Y0W8 1093 aa20.04■□□□□ 0.8
HDAC6-236ENST00000498808 NBPF11Q86T75 865 aa20.04■□□□□ 0.8
HDAC6-236ENST00000498808 CNKSR2Q8WXI2 1034 aa20.04■□□□□ 0.8
HDAC6-236ENST00000498808 APAF1O14727 1248 aa20.03■□□□□ 0.8
HDAC6-236ENST00000498808 IL1R1P14778 569 aa20.03■□□□□ 0.8
HDAC6-236ENST00000498808 FKBP1AP62942 108 aaKnown RBP20.03■□□□□ 0.8
HDAC6-236ENST00000498808 CALD1Q05682 793 aaKnown RBP20.03■□□□□ 0.8
HDAC6-236ENST00000498808 TAF1CQ15572 869 aaPredicted RBP20.03■□□□□ 0.8
HDAC6-236ENST00000498808 CDAN1Q8IWY9 1227 aa20.03■□□□□ 0.8
HDAC6-236ENST00000498808 HELBQ8NG08 1087 aaPredicted RBP20.03■□□□□ 0.8
HDAC6-236ENST00000498808 JAG2Q9Y219 1238 aa20.03■□□□□ 0.8
HDAC6-236ENST00000498808 MYCP01106 439 aaPredicted RBP20.02■□□□□ 0.8
HDAC6-236ENST00000498808 GCKRQ14397 625 aa20.02■□□□□ 0.8
HDAC6-236ENST00000498808 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.02■□□□□ 0.8
HDAC6-236ENST00000498808 G2E3Q7L622 706 aa20.02■□□□□ 0.8
HDAC6-236ENST00000498808 CHMP4AQ9BY43 222 aa20.02■□□□□ 0.8
HDAC6-236ENST00000498808 ZFYVE28Q9HCC9 887 aa20.02■□□□□ 0.8
HDAC6-236ENST00000498808 CCL15-CCL14A0A0B4J2E2 113 aa20.01■□□□□ 0.79
HDAC6-236ENST00000498808 RBM5P52756 815 aaKnown RBP eCLIP20.01■□□□□ 0.79
HDAC6-236ENST00000498808 ARHGEF6Q15052 776 aa20.01■□□□□ 0.79
HDAC6-236ENST00000498808 CCL15Q16663 113 aa20.01■□□□□ 0.79
HDAC6-236ENST00000498808 FAM43AQ8N2R8 423 aa20.01■□□□□ 0.79
HDAC6-236ENST00000498808 SH3TC2Q8TF17 1288 aa20.01■□□□□ 0.79
HDAC6-236ENST00000498808 SPDYE2Q495Y8 402 aa20■□□□□ 0.79
HDAC6-236ENST00000498808 ZNF804AQ7Z570 1209 aa20■□□□□ 0.79
HDAC6-236ENST00000498808 TEPSINQ96N21 525 aa20■□□□□ 0.79
HDAC6-236ENST00000498808 VGLL4Q14135 290 aa19.99■□□□□ 0.79
HDAC6-236ENST00000498808 CHRDL2Q6WN34 429 aa19.99■□□□□ 0.79
HDAC6-236ENST00000498808 ARHGAP39Q9C0H5 1083 aa19.99■□□□□ 0.79
HDAC6-236ENST00000498808 ZNF70Q9UC06 446 aaPredicted RBP19.99■□□□□ 0.79
HDAC6-236ENST00000498808 ANKRD18BA2A2Z9 1011 aa19.98■□□□□ 0.79
HDAC6-236ENST00000498808 GTF2A2P52657 109 aa19.98■□□□□ 0.79
HDAC6-236ENST00000498808 TNFAIP1Q13829 316 aa19.98■□□□□ 0.79
HDAC6-236ENST00000498808 STK31Q9BXU1 1019 aa19.98■□□□□ 0.79
HDAC6-236ENST00000498808 TDRD3Q9H7E2 651 aaKnown RBP19.98■□□□□ 0.79
HDAC6-236ENST00000498808 ARAP2Q8WZ64 1704 aa19.98■□□□□ 0.79
HDAC6-236ENST00000498808 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.97■□□□□ 0.79
HDAC6-236ENST00000498808 SHISA4Q96DD7 197 aa19.97■□□□□ 0.79
HDAC6-236ENST00000498808 RANBP2P49792 3224 aaKnown RBP19.96■□□□□ 0.79
HDAC6-236ENST00000498808 MAP3K9P80192 1104 aa19.96■□□□□ 0.79
HDAC6-236ENST00000498808 TSR2Q969E8 191 aaKnown RBP19.96■□□□□ 0.79
HDAC6-236ENST00000498808 TMEM39BQ9GZU3 492 aa19.96■□□□□ 0.79
HDAC6-236ENST00000498808 RBM27Q9P2N5 1060 aaKnown RBP19.96■□□□□ 0.79
HDAC6-236ENST00000498808 FAM205AQ6ZU69 1335 aa19.96■□□□□ 0.79
HDAC6-236ENST00000498808 TLR2O60603 784 aa19.95■□□□□ 0.78
HDAC6-236ENST00000498808 LACTBP83111 547 aaPredicted RBP19.95■□□□□ 0.78
HDAC6-236ENST00000498808 MYH16Q9H6N6 1097 aa19.95■□□□□ 0.78
HDAC6-236ENST00000498808 SERPINA10Q9UK55 444 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms