RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 AKAP4Q5JQC9 854 aa6.71□□□□□ -1.33
SOX2-OT-218ENST00000498731 LRRC31Q6UY01 552 aa6.71□□□□□ -1.33
SOX2-OT-218ENST00000498731 LRRC8AQ8IWT6 810 aa6.71□□□□□ -1.33
SOX2-OT-218ENST00000498731 ANKRD20A12PQ8NF67 263 aa6.71□□□□□ -1.33
SOX2-OT-218ENST00000498731 GOLGA5Q8TBA6 731 aa6.71□□□□□ -1.33
SOX2-OT-218ENST00000498731 PIK3R5Q8WYR1 880 aa6.71□□□□□ -1.33
SOX2-OT-218ENST00000498731 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.71□□□□□ -1.33
SOX2-OT-218ENST00000498731 USP32Q8NFA0 1604 aa6.71□□□□□ -1.34
SOX2-OT-218ENST00000498731 TFRCP02786 760 aaKnown RBP6.71□□□□□ -1.34
SOX2-OT-218ENST00000498731 ZNF16P17020 682 aaPredicted RBP6.71□□□□□ -1.34
SOX2-OT-218ENST00000498731 ACTN2P35609 894 aa6.71□□□□□ -1.34
SOX2-OT-218ENST00000498731 SNX1Q13596 522 aa6.71□□□□□ -1.34
SOX2-OT-218ENST00000498731 AMOTQ4VCS5 1084 aa6.71□□□□□ -1.34
SOX2-OT-218ENST00000498731 CCDC93Q567U6 631 aa6.71□□□□□ -1.34
SOX2-OT-218ENST00000498731 ZC3H12AQ5D1E8 599 aaKnown RBP6.71□□□□□ -1.34
SOX2-OT-218ENST00000498731 CTR9Q6PD62 1173 aa6.71□□□□□ -1.34
SOX2-OT-218ENST00000498731 PLA2G4DQ86XP0 818 aa6.71□□□□□ -1.34
SOX2-OT-218ENST00000498731 TRIM5Q9C035 493 aa6.71□□□□□ -1.34
SOX2-OT-218ENST00000498731 ORC3Q9UBD5 711 aaPredicted RBP6.71□□□□□ -1.34
SOX2-OT-218ENST00000498731 SPG7Q9UQ90 795 aa6.71□□□□□ -1.34
SOX2-OT-218ENST00000498731 AKAP2Q9Y2D5 859 aa6.71□□□□□ -1.34
SOX2-OT-218ENST00000498731 CAND2O75155 1236 aa6.7□□□□□ -1.34
SOX2-OT-218ENST00000498731 PHACTR2O75167 634 aa6.7□□□□□ -1.34
SOX2-OT-218ENST00000498731 GNAI3P08754 354 aa6.7□□□□□ -1.34
SOX2-OT-218ENST00000498731 ATP6V1AP38606 617 aa6.7□□□□□ -1.34
SOX2-OT-218ENST00000498731 LIG3P49916 1009 aa6.7□□□□□ -1.34
SOX2-OT-218ENST00000498731 DNM1Q05193 864 aaKnown RBP6.7□□□□□ -1.34
SOX2-OT-218ENST00000498731 COL9A3Q14050 684 aaPredicted RBP6.7□□□□□ -1.34
SOX2-OT-218ENST00000498731 SLFNL1Q499Z3 407 aa6.7□□□□□ -1.34
SOX2-OT-218ENST00000498731 ANO6Q4KMQ2 910 aa6.7□□□□□ -1.34
SOX2-OT-218ENST00000498731 CCDC91Q7Z6B0 441 aa6.7□□□□□ -1.34
SOX2-OT-218ENST00000498731 FILIP1Q7Z7B0 1213 aa6.7□□□□□ -1.34
SOX2-OT-218ENST00000498731 ARHGAP45Q92619 1136 aa6.7□□□□□ -1.34
SOX2-OT-218ENST00000498731 ERCC4Q92889 916 aaPredicted RBP6.7□□□□□ -1.34
SOX2-OT-218ENST00000498731 MST1RQ04912 1400 aa6.7□□□□□ -1.34
SOX2-OT-218ENST00000498731 ANKARQ7Z5J8 1434 aa6.7□□□□□ -1.34
SOX2-OT-218ENST00000498731 KIAA0232Q92628 1395 aa6.7□□□□□ -1.34
SOX2-OT-218ENST00000498731 CREB3O43889 395 aa6.7□□□□□ -1.34
SOX2-OT-218ENST00000498731 SDSP20132 328 aa6.7□□□□□ -1.34
SOX2-OT-218ENST00000498731 POLD1P28340 1107 aa6.7□□□□□ -1.34
SOX2-OT-218ENST00000498731 CCT4P50991 539 aaKnown RBP6.7□□□□□ -1.34
SOX2-OT-218ENST00000498731 CCNHP51946 323 aaPredicted RBP6.7□□□□□ -1.34
SOX2-OT-218ENST00000498731 CCT2P78371 535 aaKnown RBP6.7□□□□□ -1.34
SOX2-OT-218ENST00000498731 ZFYVE27Q5T4F4 411 aa6.7□□□□□ -1.34
SOX2-OT-218ENST00000498731 MICALL1Q8N3F8 863 aa6.7□□□□□ -1.34
SOX2-OT-218ENST00000498731 ZNF513Q8N8E2 541 aaPredicted RBP6.7□□□□□ -1.34
SOX2-OT-218ENST00000498731 JPH2Q9BR39 696 aaPredicted RBP6.7□□□□□ -1.34
SOX2-OT-218ENST00000498731 SIL1Q9H173 461 aa6.7□□□□□ -1.34
SOX2-OT-218ENST00000498731 EHD4Q9H223 541 aa6.7□□□□□ -1.34
SOX2-OT-218ENST00000498731 CLIP2Q9UDT6 1046 aa6.7□□□□□ -1.34
SOX2-OT-218ENST00000498731 SETD1AO15047 1707 aaKnown RBP6.7□□□□□ -1.34
SOX2-OT-218ENST00000498731 SKILP12757 684 aa6.7□□□□□ -1.34
SOX2-OT-218ENST00000498731 CORO7P57737 925 aa6.7□□□□□ -1.34
SOX2-OT-218ENST00000498731 TBC1D8BQ0IIM8 1120 aa6.7□□□□□ -1.34
SOX2-OT-218ENST00000498731 SF3B2Q13435 895 aaKnown RBP6.7□□□□□ -1.34
SOX2-OT-218ENST00000498731 SWT1Q5T5J6 900 aaKnown RBP6.7□□□□□ -1.34
SOX2-OT-218ENST00000498731 GCC1Q96CN9 775 aa6.7□□□□□ -1.34
SOX2-OT-218ENST00000498731 CD248Q9HCU0 757 aa6.7□□□□□ -1.34
SOX2-OT-218ENST00000498731 VPS18Q9P253 973 aa6.7□□□□□ -1.34
SOX2-OT-218ENST00000498731 SPATA31A6Q5VVP1 1343 aa6.7□□□□□ -1.34
SOX2-OT-218ENST00000498731 SRGAP3O43295 1099 aa6.69□□□□□ -1.34
SOX2-OT-218ENST00000498731 NEBLO76041 1014 aa6.69□□□□□ -1.34
SOX2-OT-218ENST00000498731 PYGBP11216 843 aa6.69□□□□□ -1.34
SOX2-OT-218ENST00000498731 CPA1P15085 419 aa6.69□□□□□ -1.34
SOX2-OT-218ENST00000498731 RFX1P22670 979 aa6.69□□□□□ -1.34
SOX2-OT-218ENST00000498731 HNRNPH1P31943 449 aaKnown RBP6.69□□□□□ -1.34
SOX2-OT-218ENST00000498731 PROSER3Q2NL68 480 aa6.69□□□□□ -1.34
SOX2-OT-218ENST00000498731 CWF19L2Q2TBE0 894 aaKnown RBP6.69□□□□□ -1.34
SOX2-OT-218ENST00000498731 C11orf91Q3C1V1 193 aa6.69□□□□□ -1.34
SOX2-OT-218ENST00000498731 E4F1Q66K89 784 aaPredicted RBP6.69□□□□□ -1.34
SOX2-OT-218ENST00000498731 MMS22LQ6ZRQ5 1243 aa6.69□□□□□ -1.34
SOX2-OT-218ENST00000498731 NUTM1Q86Y26 1132 aa6.69□□□□□ -1.34
SOX2-OT-218ENST00000498731 SUGP1Q8IWZ8 645 aaKnown RBP6.69□□□□□ -1.34
SOX2-OT-218ENST00000498731 LARGE2Q8N3Y3 721 aa6.69□□□□□ -1.34
SOX2-OT-218ENST00000498731 SPOCK3Q9BQ16 436 aa6.69□□□□□ -1.34
SOX2-OT-218ENST00000498731 DNAJC25Q9H1X3 360 aa6.69□□□□□ -1.34
SOX2-OT-218ENST00000498731 TRPC5Q9UL62 973 aaPredicted RBP6.69□□□□□ -1.34
SOX2-OT-218ENST00000498731 MAP3K2Q9Y2U5 619 aa6.69□□□□□ -1.34
SOX2-OT-218ENST00000498731 ATP5J2-PTCD1G3V325 749 aa6.69□□□□□ -1.34
SOX2-OT-218ENST00000498731 EIF4A1P60842 406 aaKnown RBP6.69□□□□□ -1.34
SOX2-OT-218ENST00000498731 GOLGA8FQ08AF8 430 aa6.69□□□□□ -1.34
SOX2-OT-218ENST00000498731 GOLGA8DPQ0D2H9 430 aa6.69□□□□□ -1.34
SOX2-OT-218ENST00000498731 CC2D1AQ6P1N0 951 aaPredicted RBP6.69□□□□□ -1.34
SOX2-OT-218ENST00000498731 IFNL2Q8IZJ0 200 aa6.69□□□□□ -1.34
SOX2-OT-218ENST00000498731 CCAR2Q8N163 923 aaKnown RBP6.69□□□□□ -1.34
SOX2-OT-218ENST00000498731 NLGN1Q8N2Q7 840 aa6.69□□□□□ -1.34
SOX2-OT-218ENST00000498731 HELBQ8NG08 1087 aaPredicted RBP6.69□□□□□ -1.34
SOX2-OT-218ENST00000498731 KCNB2Q92953 911 aa6.69□□□□□ -1.34
SOX2-OT-218ENST00000498731 AP1G2O75843 785 aa6.69□□□□□ -1.34
SOX2-OT-218ENST00000498731 MNAT1P51948 309 aa6.69□□□□□ -1.34
SOX2-OT-218ENST00000498731 CEP85Q6P2H3 762 aa6.69□□□□□ -1.34
SOX2-OT-218ENST00000498731 SYAP1Q96A49 352 aaPredicted RBP6.69□□□□□ -1.34
SOX2-OT-218ENST00000498731 CCDC85AQ96PX6 553 aaPredicted RBP6.69□□□□□ -1.34
SOX2-OT-218ENST00000498731 FUT8Q9BYC5 575 aa6.69□□□□□ -1.34
SOX2-OT-218ENST00000498731 BIN2Q9UBW5 565 aaPredicted RBP6.69□□□□□ -1.34
SOX2-OT-218ENST00000498731 POM121CA8CG34 1229 aa6.68□□□□□ -1.34
SOX2-OT-218ENST00000498731 PPP1R12AO14974 1030 aaPredicted RBP6.68□□□□□ -1.34
SOX2-OT-218ENST00000498731 LARGE1O95461 756 aa6.68□□□□□ -1.34
SOX2-OT-218ENST00000498731 MCM2P49736 904 aa6.68□□□□□ -1.34
SOX2-OT-218ENST00000498731 TYRO3Q06418 890 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms