RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 HELBQ8NG08 1087 aaPredicted RBP18.79■□□□□ 0.6
TRAF4-212ENST00000498540 DNAAF4Q8WXU2 420 aa18.79■□□□□ 0.6
TRAF4-212ENST00000498540 SLC10A4Q96EP9 437 aa18.79■□□□□ 0.6
TRAF4-212ENST00000498540 WNK4Q96J92 1243 aa18.79■□□□□ 0.6
TRAF4-212ENST00000498540 MYH16Q9H6N6 1097 aa18.79■□□□□ 0.6
TRAF4-212ENST00000498540 CACNA1FO60840 1977 aa18.79■□□□□ 0.6
TRAF4-212ENST00000498540 OTOFQ9HC10 1997 aa18.79■□□□□ 0.6
TRAF4-212ENST00000498540 CLRN2A0PK11 232 aa18.78■□□□□ 0.6
TRAF4-212ENST00000498540 ANKRD18BA2A2Z9 1011 aa18.78■□□□□ 0.6
TRAF4-212ENST00000498540 F8W031 263 aaPredicted RBP18.78■□□□□ 0.6
TRAF4-212ENST00000498540 IGF2BP3O00425 579 aaKnown RBP eCLIP18.78■□□□□ 0.6
TRAF4-212ENST00000498540 FKBP5Q13451 457 aaPredicted RBP18.78■□□□□ 0.6
TRAF4-212ENST00000498540 WWC1Q8IX03 1113 aa18.78■□□□□ 0.6
TRAF4-212ENST00000498540 LINS1Q8NG48 757 aa18.78■□□□□ 0.6
TRAF4-212ENST00000498540 ZBTB48P10074 688 aaPredicted RBP18.77■□□□□ 0.6
TRAF4-212ENST00000498540 CCDC27Q2M243 656 aa18.77■□□□□ 0.6
TRAF4-212ENST00000498540 CFAP100Q494V2 611 aa18.77■□□□□ 0.6
TRAF4-212ENST00000498540 C15orf52Q6ZUT6 534 aaKnown RBP18.77■□□□□ 0.6
TRAF4-212ENST00000498540 OTOP1Q7RTM1 612 aa18.77■□□□□ 0.6
TRAF4-212ENST00000498540 JAG2Q9Y219 1238 aa18.77■□□□□ 0.6
TRAF4-212ENST00000498540 TRIM17Q9Y577 477 aa18.77■□□□□ 0.6
TRAF4-212ENST00000498540 PPP2R3BQ9Y5P8 575 aa18.77■□□□□ 0.6
TRAF4-212ENST00000498540 RBBP6Q7Z6E9 1792 aaKnown RBP18.76■□□□□ 0.59
TRAF4-212ENST00000498540 SPDYE2BA6NHP3 402 aa18.76■□□□□ 0.59
TRAF4-212ENST00000498540 SPDYE6P0CI01 402 aa18.76■□□□□ 0.59
TRAF4-212ENST00000498540 IL1R1P14778 569 aa18.76■□□□□ 0.59
TRAF4-212ENST00000498540 INHBEP58166 350 aa18.76■□□□□ 0.59
TRAF4-212ENST00000498540 CCDC184Q52MB2 194 aa18.76■□□□□ 0.59
TRAF4-212ENST00000498540 PRMT6Q96LA8 375 aaPredicted RBP18.76■□□□□ 0.59
TRAF4-212ENST00000498540 PPP1R12BO60237 982 aaPredicted RBP18.75■□□□□ 0.59
TRAF4-212ENST00000498540 GJA5P36382 358 aa18.75■□□□□ 0.59
TRAF4-212ENST00000498540 FOXO4P98177 505 aa18.75■□□□□ 0.59
TRAF4-212ENST00000498540 NBPF12Q5TAG4 269 aaPredicted RBP18.75■□□□□ 0.59
TRAF4-212ENST00000498540 ZNF804AQ7Z570 1209 aa18.75■□□□□ 0.59
TRAF4-212ENST00000498540 VEZTQ9HBM0 779 aa18.75■□□□□ 0.59
TRAF4-212ENST00000498540 POTEFA5A3E0 1075 aa18.74■□□□□ 0.59
TRAF4-212ENST00000498540 MYO1BO43795 1136 aa18.74■□□□□ 0.59
TRAF4-212ENST00000498540 IFIT5Q13325 482 aaKnown RBP18.74■□□□□ 0.59
TRAF4-212ENST00000498540 CHMP3Q9Y3E7 222 aa18.74■□□□□ 0.59
TRAF4-212ENST00000498540 ARAP2Q8WZ64 1704 aa18.74■□□□□ 0.59
TRAF4-212ENST00000498540 FANCIQ9NVI1 1328 aa18.74■□□□□ 0.59
TRAF4-212ENST00000498540 FKBP1AP62942 108 aaKnown RBP18.73■□□□□ 0.59
TRAF4-212ENST00000498540 CRHR2Q13324 411 aa18.73■□□□□ 0.59
TRAF4-212ENST00000498540 SUPT20HL1Q3ZLR7 823 aa18.73■□□□□ 0.59
TRAF4-212ENST00000498540 MKI67P46013 3256 aaKnown RBP18.73■□□□□ 0.59
TRAF4-212ENST00000498540 CENPFP49454 3210 aa18.73■□□□□ 0.59
TRAF4-212ENST00000498540 IL16Q14005 1332 aa18.73■□□□□ 0.59
TRAF4-212ENST00000498540 F6X3S4 739 aa18.72■□□□□ 0.59
TRAF4-212ENST00000498540 USP2O75604 605 aaPredicted RBP18.72■□□□□ 0.59
TRAF4-212ENST00000498540 CD99L2Q8TCZ2 262 aa18.72■□□□□ 0.59
TRAF4-212ENST00000498540 ZNF594Q96JF6 807 aaPredicted RBP18.72■□□□□ 0.59
TRAF4-212ENST00000498540 UNCXA6NJT0 531 aa18.71■□□□□ 0.59
TRAF4-212ENST00000498540 IREB2P48200 963 aaKnown RBP18.71■□□□□ 0.59
TRAF4-212ENST00000498540 RBM5P52756 815 aaKnown RBP eCLIP18.71■□□□□ 0.598e-14■■■■□ 26.3
TRAF4-212ENST00000498540 CAP1Q01518 475 aa18.71■□□□□ 0.59
TRAF4-212ENST00000498540 RASA3Q14644 834 aa18.71■□□□□ 0.59
TRAF4-212ENST00000498540 EPHA10Q5JZY3 1008 aa18.71■□□□□ 0.59
TRAF4-212ENST00000498540 PTPN18Q99952 460 aa18.71■□□□□ 0.59
TRAF4-212ENST00000498540 PTPN22Q9Y2R2 807 aa18.71■□□□□ 0.59
TRAF4-212ENST00000498540 PLIN1O60240 522 aa18.7■□□□□ 0.58
TRAF4-212ENST00000498540 VAMP4O75379 141 aa18.7■□□□□ 0.58
TRAF4-212ENST00000498540 BEND3Q5T5X7 828 aa18.7■□□□□ 0.58
TRAF4-212ENST00000498540 LMBR1LQ6UX01 489 aa18.7■□□□□ 0.58
TRAF4-212ENST00000498540 ANKRD13AQ8IZ07 590 aa18.7■□□□□ 0.58
TRAF4-212ENST00000498540 ERO1AQ96HE7 468 aa18.7■□□□□ 0.58
TRAF4-212ENST00000498540 KIAA0100Q14667 2235 aaKnown RBP18.7■□□□□ 0.58
TRAF4-212ENST00000498540 INTS3Q68E01 1043 aaKnown RBP18.69■□□□□ 0.58
TRAF4-212ENST00000498540 CDAN1Q8IWY9 1227 aa18.69■□□□□ 0.58
TRAF4-212ENST00000498540 ELP3Q9H9T3 547 aa18.69■□□□□ 0.58
TRAF4-212ENST00000498540 TESPA1A2RU30 521 aaPredicted RBP18.68■□□□□ 0.58
TRAF4-212ENST00000498540 SPDYE2Q495Y8 402 aa18.68■□□□□ 0.58
TRAF4-212ENST00000498540 MFSD14BQ5SR56 506 aa18.68■□□□□ 0.58
TRAF4-212ENST00000498540 OTUD7BQ6GQQ9 843 aa18.68■□□□□ 0.58
TRAF4-212ENST00000498540 LDHAL6AQ6ZMR3 332 aa18.68■□□□□ 0.58
TRAF4-212ENST00000498540 OPTNQ96CV9 577 aa18.68■□□□□ 0.58
TRAF4-212ENST00000498540 ZNF70Q9UC06 446 aaPredicted RBP18.68■□□□□ 0.58
TRAF4-212ENST00000498540 FAM205AQ6ZU69 1335 aa18.68■□□□□ 0.58
TRAF4-212ENST00000498540 BRCA2P51587 3418 aa18.67■□□□□ 0.58
TRAF4-212ENST00000498540 EXOSC9Q06265 439 aaKnown RBP18.67■□□□□ 0.58
TRAF4-212ENST00000498540 CCDC57Q2TAC2 916 aa18.67■□□□□ 0.58
TRAF4-212ENST00000498540 TAF7LQ5H9L4 462 aa18.67■□□□□ 0.58
TRAF4-212ENST00000498540 CNKSR2Q8WXI2 1034 aa18.67■□□□□ 0.58
TRAF4-212ENST00000498540 ARMC5Q96C12 935 aa18.67■□□□□ 0.58
TRAF4-212ENST00000498540 GCC1Q96CN9 775 aa18.67■□□□□ 0.58
TRAF4-212ENST00000498540 TEPSINQ96N21 525 aa18.67■□□□□ 0.58
TRAF4-212ENST00000498540 TDRD3Q9H7E2 651 aaKnown RBP18.67■□□□□ 0.58
TRAF4-212ENST00000498540 EFCC1Q9HA90 598 aa18.67■□□□□ 0.58
TRAF4-212ENST00000498540 CNNM1Q9NRU3 951 aa18.67■□□□□ 0.58
TRAF4-212ENST00000498540 GYG1P46976 350 aa18.66■□□□□ 0.58
TRAF4-212ENST00000498540 SP3Q02447 781 aa18.66■□□□□ 0.58
TRAF4-212ENST00000498540 TNFAIP1Q13829 316 aa18.66■□□□□ 0.58
TRAF4-212ENST00000498540 TDRD7Q8NHU6 1098 aaKnown RBP18.66■□□□□ 0.58
TRAF4-212ENST00000498540 MS4A4AQ96JQ5 239 aa18.66■□□□□ 0.58
TRAF4-212ENST00000498540 SERPINA10Q9UK55 444 aa18.66■□□□□ 0.58
TRAF4-212ENST00000498540 TTF2Q9UNY4 1162 aaKnown RBP18.66■□□□□ 0.58
TRAF4-212ENST00000498540 GRM8O00222 908 aa18.65■□□□□ 0.58
TRAF4-212ENST00000498540 EN2P19622 333 aaPredicted RBP18.65■□□□□ 0.58
TRAF4-212ENST00000498540 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.65■□□□□ 0.58
TRAF4-212ENST00000498540 TCP10L2B9ZVM9 353 aa18.64■□□□□ 0.57
TRAF4-212ENST00000498540 NCBP3Q53F19 620 aaKnown RBP18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms