RNA–Protein interactions for RNA: ENST00000497171.1

PHC3-216, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-216ENST00000497171 TTC16Q8NEE8 873 aa6.75□□□□□ -1.33
PHC3-216ENST00000497171 TBC1D32Q96NH3 1257 aa6.75□□□□□ -1.33
PHC3-216ENST00000497171 SAP130Q9H0E3 1048 aa6.75□□□□□ -1.33
PHC3-216ENST00000497171 ACIN1Q9UKV3 1341 aaKnown RBP6.75□□□□□ -1.33
PHC3-216ENST00000497171 PDE2AO00408 941 aaPredicted RBP6.74□□□□□ -1.33
PHC3-216ENST00000497171 EIF4EBP3O60516 100 aaPredicted RBP6.74□□□□□ -1.33
PHC3-216ENST00000497171 CYP2E1P05181 493 aaPredicted RBP6.74□□□□□ -1.33
PHC3-216ENST00000497171 DUSP27Q5VZP5 1158 aa6.74□□□□□ -1.33
PHC3-216ENST00000497171 SMG8Q8ND04 991 aaKnown RBP6.74□□□□□ -1.33
PHC3-216ENST00000497171 ELP3Q9H9T3 547 aa6.74□□□□□ -1.33
PHC3-216ENST00000497171 SUGCTQ9HAC7 445 aa6.74□□□□□ -1.33
PHC3-216ENST00000497171 KANSL3Q9P2N6 904 aa6.74□□□□□ -1.33
PHC3-216ENST00000497171 NOVA2Q9UNW9 492 aaKnown RBP6.74□□□□□ -1.33
PHC3-216ENST00000497171 PCSK2P16519 638 aa6.73□□□□□ -1.33
PHC3-216ENST00000497171 CES1P23141 567 aa6.73□□□□□ -1.33
PHC3-216ENST00000497171 CYP27A1Q02318 531 aa6.73□□□□□ -1.33
PHC3-216ENST00000497171 IKBKEQ14164 716 aa6.73□□□□□ -1.33
PHC3-216ENST00000497171 ADAMTSL4Q6UY14 1074 aa6.73□□□□□ -1.33
PHC3-216ENST00000497171 CLUAP1Q96AJ1 413 aa6.73□□□□□ -1.33
PHC3-216ENST00000497171 STIM2Q9P246 746 aa6.73□□□□□ -1.33
PHC3-216ENST00000497171 ZAR1Q86SH2 424 aa6.72□□□□□ -1.33
PHC3-216ENST00000497171 FNBP4Q8N3X1 1017 aaPredicted RBP6.72□□□□□ -1.33
PHC3-216ENST00000497171 PMEPA1Q969W9 287 aa6.72□□□□□ -1.33
PHC3-216ENST00000497171 TMPRSS13Q9BYE2 586 aa6.72□□□□□ -1.33
PHC3-216ENST00000497171 TNFRSF10BO14763 440 aa6.71□□□□□ -1.34
PHC3-216ENST00000497171 TIAF1O95411 115 aa6.71□□□□□ -1.34
PHC3-216ENST00000497171 FBLIM1Q8WUP2 373 aa6.71□□□□□ -1.34
PHC3-216ENST00000497171 MKNK1Q9BUB5 465 aa6.71□□□□□ -1.34
PHC3-216ENST00000497171 DBX1A6NMT0 343 aa6.7□□□□□ -1.34
PHC3-216ENST00000497171 MAP7Q14244 749 aa6.7□□□□□ -1.34
PHC3-216ENST00000497171 NAA30Q147X3 362 aaPredicted RBP6.7□□□□□ -1.34
PHC3-216ENST00000497171 PLCL1Q15111 1095 aa6.7□□□□□ -1.34
PHC3-216ENST00000497171 EXOSC6Q5RKV6 272 aaKnown RBP6.7□□□□□ -1.34
PHC3-216ENST00000497171 STK11IPQ8N1F8 1099 aa6.7□□□□□ -1.34
PHC3-216ENST00000497171 BSNDQ8WZ55 320 aa6.7□□□□□ -1.34
PHC3-216ENST00000497171 LRRC4CQ9HCJ2 640 aa6.7□□□□□ -1.34
PHC3-216ENST00000497171 PAK6Q9NQU5 681 aaPredicted RBP6.7□□□□□ -1.34
PHC3-216ENST00000497171 DZANK1Q9NVP4 752 aa6.7□□□□□ -1.34
PHC3-216ENST00000497171 TMEM63CQ9P1W3 806 aa6.7□□□□□ -1.34
PHC3-216ENST00000497171 SOX13Q9UN79 622 aa6.7□□□□□ -1.34
PHC3-216ENST00000497171 LOC100289279A0A1B0GTE1 492 aa6.69□□□□□ -1.34
PHC3-216ENST00000497171 OCLNQ16625 522 aa6.69□□□□□ -1.34
PHC3-216ENST00000497171 HP1BP3Q5SSJ5 553 aaPredicted RBP6.69□□□□□ -1.34
PHC3-216ENST00000497171 ZNF648Q5T619 568 aaPredicted RBP6.69□□□□□ -1.34
PHC3-216ENST00000497171 NUDT16Q96DE0 195 aaKnown RBP6.69□□□□□ -1.34
PHC3-216ENST00000497171 PRKAG2Q9UGJ0 569 aa6.69□□□□□ -1.34
PHC3-216ENST00000497171 SALL4Q9UJQ4 1053 aa6.69□□□□□ -1.34
PHC3-216ENST00000497171 SLC5A6Q9Y289 635 aa6.69□□□□□ -1.34
PHC3-216ENST00000497171 FARP2O94887 1054 aaPredicted RBP6.68□□□□□ -1.34
PHC3-216ENST00000497171 CDCA8Q53HL2 280 aa6.68□□□□□ -1.34
PHC3-216ENST00000497171 FAM26DQ5JW98 314 aa6.68□□□□□ -1.34
PHC3-216ENST00000497171 NFXL1Q6ZNB6 911 aa6.68□□□□□ -1.34
PHC3-216ENST00000497171 KSR1Q8IVT5 923 aa6.68□□□□□ -1.34
PHC3-216ENST00000497171 SLC38A3Q99624 504 aa6.68□□□□□ -1.34
PHC3-216ENST00000497171 SOX17Q9H6I2 414 aaPredicted RBP6.68□□□□□ -1.34
PHC3-216ENST00000497171 FAM170BA6NMN3 283 aa6.67□□□□□ -1.34
PHC3-216ENST00000497171 DRD2P14416 443 aa6.67□□□□□ -1.34
PHC3-216ENST00000497171 CDPF1Q6NVV7 123 aa6.67□□□□□ -1.34
PHC3-216ENST00000497171 TMEM102Q8N9M5 508 aaPredicted RBP6.67□□□□□ -1.34
PHC3-216ENST00000497171 C2CD4AQ8NCU7 369 aaPredicted RBP6.67□□□□□ -1.34
PHC3-216ENST00000497171 EZH1Q92800 747 aaPredicted RBP6.67□□□□□ -1.34
PHC3-216ENST00000497171 CXXC1Q9P0U4 656 aaPredicted RBP6.67□□□□□ -1.34
PHC3-216ENST00000497171 NFKBIEO00221 500 aa6.66□□□□□ -1.34
PHC3-216ENST00000497171 SOX1O00570 391 aaPredicted RBP6.66□□□□□ -1.34
PHC3-216ENST00000497171 PAPLNO95428 1278 aa6.66□□□□□ -1.34
PHC3-216ENST00000497171 ACPPP15309 386 aa6.66□□□□□ -1.34
PHC3-216ENST00000497171 RAB6AP20340 208 aa6.66□□□□□ -1.34
PHC3-216ENST00000497171 ADMP35318 185 aa6.66□□□□□ -1.34
PHC3-216ENST00000497171 SOX4Q06945 474 aaPredicted RBP6.66□□□□□ -1.34
PHC3-216ENST00000497171 FBLN7Q53RD9 439 aa6.66□□□□□ -1.34
PHC3-216ENST00000497171 C1orf127Q8N9H9 656 aa6.66□□□□□ -1.34
PHC3-216ENST00000497171 CNTN3Q9P232 1028 aa6.66□□□□□ -1.34
PHC3-216ENST00000497171 ZC3H7BQ9UGR2 993 aaKnown RBP6.66□□□□□ -1.34
PHC3-216ENST00000497171 EDN3P14138 238 aa6.65□□□□□ -1.34
PHC3-216ENST00000497171 GSTM4Q03013 218 aa6.65□□□□□ -1.34
PHC3-216ENST00000497171 ZNF124Q15973 351 aa6.65□□□□□ -1.34
PHC3-216ENST00000497171 CFAP70Q5T0N1 1121 aa6.65□□□□□ -1.34
PHC3-216ENST00000497171 OSMRQ99650 979 aa6.65□□□□□ -1.34
PHC3-216ENST00000497171 ZFYVE1Q9HBF4 777 aa6.65□□□□□ -1.34
PHC3-216ENST00000497171 TRPA1O75762 1119 aa6.64□□□□□ -1.35
PHC3-216ENST00000497171 ADH5P11766 374 aa6.64□□□□□ -1.35
PHC3-216ENST00000497171 ELOAQ14241 798 aaKnown RBP6.64□□□□□ -1.35
PHC3-216ENST00000497171 COL19A1Q14993 1142 aa6.64□□□□□ -1.35
PHC3-216ENST00000497171 ZNF792Q3KQV3 632 aa6.64□□□□□ -1.35
PHC3-216ENST00000497171 C8orf34Q49A92 452 aa6.64□□□□□ -1.35
PHC3-216ENST00000497171 HGSNATQ68CP4 663 aa6.64□□□□□ -1.35
PHC3-216ENST00000497171 XKR5Q6UX68 686 aa6.64□□□□□ -1.35
PHC3-216ENST00000497171 SHISA5Q8N114 240 aa6.64□□□□□ -1.35
PHC3-216ENST00000497171 ASAP3Q8TDY4 903 aa6.64□□□□□ -1.35
PHC3-216ENST00000497171 MISP3Q96FF7 219 aa6.64□□□□□ -1.35
PHC3-216ENST00000497171 HHIPQ96QV1 700 aa6.64□□□□□ -1.35
PHC3-216ENST00000497171 TIMELESSQ9UNS1 1208 aa6.64□□□□□ -1.35
PHC3-216ENST00000497171 ZBTB39O15060 712 aa6.63□□□□□ -1.35
PHC3-216ENST00000497171 ZNF765Q7L2R6 523 aa6.63□□□□□ -1.35
PHC3-216ENST00000497171 VN1R5Q7Z5H4 357 aa6.63□□□□□ -1.35
PHC3-216ENST00000497171 BCL7CQ8WUZ0 217 aaPredicted RBP6.63□□□□□ -1.35
PHC3-216ENST00000497171 FAM168AQ92567 244 aa6.63□□□□□ -1.35
PHC3-216ENST00000497171 NXPE3Q969Y0 559 aa6.63□□□□□ -1.35
PHC3-216ENST00000497171 KRTAP4-2Q9BYR5 136 aa6.63□□□□□ -1.35
PHC3-216ENST00000497171 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms