RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 DPF2Q92785 391 aa23.95■■□□□ 1.42
HDAC4-212ENST00000495497 EAF2Q96CJ1 260 aaPredicted RBP23.95■■□□□ 1.42
HDAC4-212ENST00000495497 CCDC8Q9H0W5 538 aaPredicted RBP23.95■■□□□ 1.42
HDAC4-212ENST00000495497 EAPPQ56P03 285 aaPredicted RBP23.94■■□□□ 1.42
HDAC4-212ENST00000495497 DBNDD2Q9BQY9 259 aa23.94■■□□□ 1.42
HDAC4-212ENST00000495497 TLR7Q9NYK1 1049 aaKnown RBP23.94■■□□□ 1.42
HDAC4-212ENST00000495497 FAM205AQ6ZU69 1335 aa23.93■■□□□ 1.42
HDAC4-212ENST00000495497 RAB11FIP3O75154 756 aa23.93■■□□□ 1.42
HDAC4-212ENST00000495497 GORABQ5T7V8 394 aa23.93■■□□□ 1.42
HDAC4-212ENST00000495497 KIF1BPQ96EK5 621 aa23.93■■□□□ 1.42
HDAC4-212ENST00000495497 DCTPP1Q9H773 170 aa23.93■■□□□ 1.42
HDAC4-212ENST00000495497 H7C1D1 291 aa23.92■■□□□ 1.42
HDAC4-212ENST00000495497 RBM26Q5T8P6 1007 aaKnown RBP23.92■■□□□ 1.42
HDAC4-212ENST00000495497 SAMD7Q7Z3H4 446 aa23.92■■□□□ 1.42
HDAC4-212ENST00000495497 KIAA0825Q8IV33 1275 aa23.92■■□□□ 1.42
HDAC4-212ENST00000495497 TRPM4Q8TD43 1214 aa23.92■■□□□ 1.42
HDAC4-212ENST00000495497 ADARB2Q9NS39 739 aaKnown RBP23.92■■□□□ 1.42
HDAC4-212ENST00000495497 GNL3LQ9NVN8 582 aaKnown RBP23.92■■□□□ 1.42
HDAC4-212ENST00000495497 ZNF646O15015 1829 aaPredicted RBP23.91■■□□□ 1.42
HDAC4-212ENST00000495497 F8W031 263 aaPredicted RBP23.91■■□□□ 1.42
HDAC4-212ENST00000495497 SMARCA5O60264 1052 aaPredicted RBP23.91■■□□□ 1.42
HDAC4-212ENST00000495497 EGFRP00533 1210 aa23.91■■□□□ 1.42
HDAC4-212ENST00000495497 AAMPQ13685 434 aa23.91■■□□□ 1.42
HDAC4-212ENST00000495497 TBC1D10BQ4KMP7 808 aaPredicted RBP23.91■■□□□ 1.42
HDAC4-212ENST00000495497 AACSQ86V21 672 aa23.91■■□□□ 1.42
HDAC4-212ENST00000495497 DBNLQ9UJU6 430 aaKnown RBP23.91■■□□□ 1.42
HDAC4-212ENST00000495497 COL1A1P02452 1464 aaPredicted RBP23.91■■□□□ 1.42
HDAC4-212ENST00000495497 SCN4AP35499 1836 aa23.91■■□□□ 1.42
HDAC4-212ENST00000495497 PSME4Q14997 1843 aa23.91■■□□□ 1.42
HDAC4-212ENST00000495497 MYO3BQ8WXR4 1341 aa23.9■■□□□ 1.42
HDAC4-212ENST00000495497 USP17L8P0C7I0 530 aa23.9■■□□□ 1.42
HDAC4-212ENST00000495497 HIRAP54198 1017 aaPredicted RBP23.9■■□□□ 1.42
HDAC4-212ENST00000495497 GRIK5Q16478 980 aa23.9■■□□□ 1.42
HDAC4-212ENST00000495497 MFSD14BQ5SR56 506 aa23.9■■□□□ 1.42
HDAC4-212ENST00000495497 ARAP2Q8WZ64 1704 aa23.9■■□□□ 1.42
HDAC4-212ENST00000495497 TOMM70O94826 608 aa23.89■■□□□ 1.41
HDAC4-212ENST00000495497 PNMA8AQ86V59 439 aaPredicted RBP23.89■■□□□ 1.41
HDAC4-212ENST00000495497 CLEC11AQ9Y240 323 aa23.89■■□□□ 1.41
HDAC4-212ENST00000495497 ZNF280AP59817 542 aaPredicted RBP23.88■■□□□ 1.41
HDAC4-212ENST00000495497 FKBP1AP62942 108 aaKnown RBP23.88■■□□□ 1.41
HDAC4-212ENST00000495497 RASGRF1Q13972 1273 aa23.88■■□□□ 1.41
HDAC4-212ENST00000495497 USP50Q70EL3 339 aaPredicted RBP23.88■■□□□ 1.41
HDAC4-212ENST00000495497 CLASRPQ8N2M8 674 aaKnown RBP23.88■■□□□ 1.41
HDAC4-212ENST00000495497 LRRCC1Q9C099 1032 aa23.88■■□□□ 1.41
HDAC4-212ENST00000495497 DENND2AQ9ULE3 1009 aa23.88■■□□□ 1.41
HDAC4-212ENST00000495497 CENPBP07199 599 aaPredicted RBP23.87■■□□□ 1.41
HDAC4-212ENST00000495497 HDAC1Q13547 482 aaPredicted RBP23.87■■□□□ 1.41
HDAC4-212ENST00000495497 SCARF1Q14162 830 aa23.87■■□□□ 1.41
HDAC4-212ENST00000495497 TTC39AQ5SRH9 613 aa23.87■■□□□ 1.41
HDAC4-212ENST00000495497 PI16Q6UXB8 463 aa23.87■■□□□ 1.41
HDAC4-212ENST00000495497 ARID4AP29374 1257 aaPredicted RBP23.86■■□□□ 1.41
HDAC4-212ENST00000495497 KIF4BQ2VIQ3 1234 aa23.86■■□□□ 1.41
HDAC4-212ENST00000495497 CCDC158Q5M9N0 1113 aa23.86■■□□□ 1.41
HDAC4-212ENST00000495497 RBM46Q8TBY0 533 aaKnown RBP23.86■■□□□ 1.41
HDAC4-212ENST00000495497 MYOZ2Q9NPC6 264 aa23.86■■□□□ 1.41
HDAC4-212ENST00000495497 SEMA3EO15041 775 aa23.85■■□□□ 1.41
HDAC4-212ENST00000495497 IGHDP01880 384 aa23.85■■□□□ 1.41
HDAC4-212ENST00000495497 LDHDQ86WU2 507 aa23.85■■□□□ 1.41
HDAC4-212ENST00000495497 OGFOD1Q8N543 542 aa23.85■■□□□ 1.41
HDAC4-212ENST00000495497 TBC1D22AQ8WUA7 517 aa23.85■■□□□ 1.41
HDAC4-212ENST00000495497 HMG20BQ9P0W2 317 aa23.85■■□□□ 1.41
HDAC4-212ENST00000495497 PCDHAC2Q9Y5I4 1007 aa23.85■■□□□ 1.41
HDAC4-212ENST00000495497 IFIT2P09913 472 aaKnown RBP23.84■■□□□ 1.41
HDAC4-212ENST00000495497 MCAMP43121 646 aa23.84■■□□□ 1.41
HDAC4-212ENST00000495497 WDR66Q8TBY9 1149 aa23.84■■□□□ 1.41
HDAC4-212ENST00000495497 SNRKQ9NRH2 765 aa23.84■■□□□ 1.41
HDAC4-212ENST00000495497 TTF2Q9UNY4 1162 aaKnown RBP23.84■■□□□ 1.41
HDAC4-212ENST00000495497 ASTN2O75129 1339 aaPredicted RBP23.84■■□□□ 1.41
HDAC4-212ENST00000495497 UQCRFS1P1P0C7P4 283 aa23.83■■□□□ 1.41
HDAC4-212ENST00000495497 MAP1SQ66K74 1059 aaPredicted RBP23.83■■□□□ 1.41
HDAC4-212ENST00000495497 CHADLQ6NUI6 762 aa23.83■■□□□ 1.41
HDAC4-212ENST00000495497 SPATA5Q8NB90 893 aa23.83■■□□□ 1.41
HDAC4-212ENST00000495497 RWDD1Q9H446 243 aaPredicted RBP23.83■■□□□ 1.41
HDAC4-212ENST00000495497 HDAC9Q9UKV0 1011 aa23.83■■□□□ 1.41
HDAC4-212ENST00000495497 ZBTB22O15209 634 aa23.82■■□□□ 1.4
HDAC4-212ENST00000495497 SMC1BQ8NDV3 1235 aa23.82■■□□□ 1.4
HDAC4-212ENST00000495497 PRDX5P30044 214 aa23.81■■□□□ 1.4
HDAC4-212ENST00000495497 NBPF9Q3BBW0 867 aa23.81■■□□□ 1.4
HDAC4-212ENST00000495497 TBC1D9Q6ZT07 1266 aa23.81■■□□□ 1.4
HDAC4-212ENST00000495497 NDUFB9Q9Y6M9 179 aa23.81■■□□□ 1.4
HDAC4-212ENST00000495497 C1QTNF8P60827 252 aa23.8■■□□□ 1.4
HDAC4-212ENST00000495497 CFAP100Q494V2 611 aa23.8■■□□□ 1.4
HDAC4-212ENST00000495497 ABCF2Q9UG63 623 aa23.8■■□□□ 1.4
HDAC4-212ENST00000495497 ADAMTSL1Q8N6G6 1762 aa23.8■■□□□ 1.4
HDAC4-212ENST00000495497 RBM5P52756 815 aaKnown RBP eCLIP23.79■■□□□ 1.4
HDAC4-212ENST00000495497 ANKRD45Q5TZF3 282 aa23.79■■□□□ 1.4
HDAC4-212ENST00000495497 GCC1Q96CN9 775 aa23.79■■□□□ 1.4
HDAC4-212ENST00000495497 ZNF512BQ96KM6 892 aaPredicted RBP23.79■■□□□ 1.4
HDAC4-212ENST00000495497 PDS5AQ29RF7 1337 aaKnown RBP23.79■■□□□ 1.4
HDAC4-212ENST00000495497 SALL1Q9NSC2 1324 aa23.79■■□□□ 1.4
HDAC4-212ENST00000495497 WNT10BO00744 389 aa23.78■■□□□ 1.4
HDAC4-212ENST00000495497 LDHBP07195 334 aaKnown RBP23.78■■□□□ 1.4
HDAC4-212ENST00000495497 ZAP70P43403 619 aa23.78■■□□□ 1.4
HDAC4-212ENST00000495497 DLGAP5Q15398 846 aa23.78■■□□□ 1.4
HDAC4-212ENST00000495497 CNTROBQ8N137 903 aa23.78■■□□□ 1.4
HDAC4-212ENST00000495497 ZBED3Q96IU2 234 aaPredicted RBP23.78■■□□□ 1.4
HDAC4-212ENST00000495497 PGAP2Q9UHJ9 254 aa23.78■■□□□ 1.4
HDAC4-212ENST00000495497 AOX1Q06278 1338 aa23.78■■□□□ 1.4
HDAC4-212ENST00000495497 CRKP46108 304 aa23.77■■□□□ 1.4
HDAC4-212ENST00000495497 MMP14P50281 582 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms