RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 PARP10Q53GL7 1025 aa11.96□□□□□ -0.49
GARNL3-219ENST00000495172 NBPF12Q5TAG4 269 aaPredicted RBP11.96□□□□□ -0.49
GARNL3-219ENST00000495172 USP17L1Q7RTZ2 530 aa11.96□□□□□ -0.49
GARNL3-219ENST00000495172 ALYREFQ86V81 257 aaKnown RBP11.96□□□□□ -0.49
GARNL3-219ENST00000495172 DEFB129Q9H1M3 183 aa11.96□□□□□ -0.49
GARNL3-219ENST00000495172 SRRDQ9UH36 339 aa11.96□□□□□ -0.49
GARNL3-219ENST00000495172 CPA4Q9UI42 421 aa11.96□□□□□ -0.49
GARNL3-219ENST00000495172 PSMC4P43686 418 aa11.95□□□□□ -0.5
GARNL3-219ENST00000495172 KIF22Q14807 665 aa11.95□□□□□ -0.5
GARNL3-219ENST00000495172 RTL5Q5HYW3 569 aaPredicted RBP11.95□□□□□ -0.5
GARNL3-219ENST00000495172 NLRP10Q86W26 655 aa11.95□□□□□ -0.5
GARNL3-219ENST00000495172 GAS2L2Q8NHY3 880 aa11.95□□□□□ -0.5
GARNL3-219ENST00000495172 TRMT112Q9UI30 125 aaKnown RBP11.95□□□□□ -0.5
GARNL3-219ENST00000495172 MUC6Q6W4X9 2439 aa11.95□□□□□ -0.5
GARNL3-219ENST00000495172 MYPNQ86TC9 1320 aa11.94□□□□□ -0.5
GARNL3-219ENST00000495172 U2SURPO15042 1029 aaKnown RBP11.94□□□□□ -0.5
GARNL3-219ENST00000495172 ELNP15502 786 aa11.94□□□□□ -0.5
GARNL3-219ENST00000495172 PRKCZQ05513 592 aa11.94□□□□□ -0.5
GARNL3-219ENST00000495172 TJAP1Q5JTD0 557 aa11.94□□□□□ -0.5
GARNL3-219ENST00000495172 APOBEC3FQ8IUX4 373 aaKnown RBP11.94□□□□□ -0.5
GARNL3-219ENST00000495172 CDAN1Q8IWY9 1227 aa11.94□□□□□ -0.5
GARNL3-219ENST00000495172 GABRQQ9UN88 632 aa11.94□□□□□ -0.5
GARNL3-219ENST00000495172 SYNGAP1Q96PV0 1343 aa11.93□□□□□ -0.5
GARNL3-219ENST00000495172 CLRN2A0PK11 232 aa11.93□□□□□ -0.5
GARNL3-219ENST00000495172 PPP1R12BO60237 982 aaPredicted RBP11.93□□□□□ -0.5
GARNL3-219ENST00000495172 TLR2O60603 784 aa11.93□□□□□ -0.5
GARNL3-219ENST00000495172 DIAPH1O60610 1272 aaKnown RBP11.93□□□□□ -0.5
GARNL3-219ENST00000495172 FMNL1O95466 1100 aaPredicted RBP11.93□□□□□ -0.5
GARNL3-219ENST00000495172 PROSER3Q2NL68 480 aa11.93□□□□□ -0.5
GARNL3-219ENST00000495172 DACT2Q5SW24 774 aa11.93□□□□□ -0.5
GARNL3-219ENST00000495172 ZNF697Q5TEC3 545 aa11.93□□□□□ -0.5
GARNL3-219ENST00000495172 FAM109BQ6ICB4 259 aaPredicted RBP11.93□□□□□ -0.5
GARNL3-219ENST00000495172 ANKIB1Q9P2G1 1089 aa11.93□□□□□ -0.5
GARNL3-219ENST00000495172 TMC4Q7Z404 712 aa11.92□□□□□ -0.5
GARNL3-219ENST00000495172 KIAA0825Q8IV33 1275 aa11.92□□□□□ -0.5
GARNL3-219ENST00000495172 TTYH1Q9H313 450 aaPredicted RBP11.92□□□□□ -0.5
GARNL3-219ENST00000495172 SEMA6BQ9H3T3 888 aa11.92□□□□□ -0.5
GARNL3-219ENST00000495172 SEC31BQ9NQW1 1179 aa11.92□□□□□ -0.5
GARNL3-219ENST00000495172 REV3LO60673 3130 aa11.92□□□□□ -0.5
GARNL3-219ENST00000495172 COL2A1P02458 1487 aaPredicted RBP11.91□□□□□ -0.5
GARNL3-219ENST00000495172 BTBD19C9JJ37 291 aa11.91□□□□□ -0.5
GARNL3-219ENST00000495172 UBXN2AP68543 259 aa11.91□□□□□ -0.5
GARNL3-219ENST00000495172 LRP10Q7Z4F1 713 aa11.91□□□□□ -0.5
GARNL3-219ENST00000495172 ZBED3Q96IU2 234 aaPredicted RBP11.91□□□□□ -0.5
GARNL3-219ENST00000495172 NECAB3Q96P71 396 aaPredicted RBP11.91□□□□□ -0.5
GARNL3-219ENST00000495172 GGA1Q9UJY5 639 aa11.91□□□□□ -0.5
GARNL3-219ENST00000495172 DDX60LQ5H9U9 1706 aaKnown RBP11.91□□□□□ -0.5
GARNL3-219ENST00000495172 XIRP2A4UGR9 3374 aa11.9□□□□□ -0.5
GARNL3-219ENST00000495172 SH3TC1Q8TE82 1336 aa11.9□□□□□ -0.5
GARNL3-219ENST00000495172 INHAP05111 366 aa11.9□□□□□ -0.5
GARNL3-219ENST00000495172 FOSL2P15408 326 aa11.9□□□□□ -0.5
GARNL3-219ENST00000495172 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.9□□□□□ -0.5
GARNL3-219ENST00000495172 NECAB2Q7Z6G3 386 aa11.9□□□□□ -0.5
GARNL3-219ENST00000495172 OGFOD1Q8N543 542 aa11.9□□□□□ -0.5
GARNL3-219ENST00000495172 NECTIN2Q92692 538 aa11.9□□□□□ -0.5
GARNL3-219ENST00000495172 FAM89AQ96GI7 184 aa11.9□□□□□ -0.5
GARNL3-219ENST00000495172 IREB2P48200 963 aaKnown RBP11.89□□□□□ -0.51
GARNL3-219ENST00000495172 PRMT2P55345 433 aa11.89□□□□□ -0.51
GARNL3-219ENST00000495172 RPS8P62241 208 aaKnown RBP11.89□□□□□ -0.51
GARNL3-219ENST00000495172 AIMP1Q12904 312 aaKnown RBP11.89□□□□□ -0.51
GARNL3-219ENST00000495172 C17orf99Q6UX52 265 aa11.89□□□□□ -0.51
GARNL3-219ENST00000495172 ANKRD13AQ8IZ07 590 aa11.89□□□□□ -0.51
GARNL3-219ENST00000495172 CCDC85AQ96PX6 553 aaPredicted RBP11.89□□□□□ -0.51
GARNL3-219ENST00000495172 PODXL2Q9NZ53 605 aa11.89□□□□□ -0.51
GARNL3-219ENST00000495172 MGAMO43451 1857 aa11.89□□□□□ -0.51
GARNL3-219ENST00000495172 TCF20Q9UGU0 1960 aaKnown RBP11.88□□□□□ -0.51
GARNL3-219ENST00000495172 PRKAR2BP31323 418 aa11.88□□□□□ -0.51
GARNL3-219ENST00000495172 VGLL4Q14135 290 aa11.88□□□□□ -0.51
GARNL3-219ENST00000495172 ADAMTS19Q8TE59 1207 aa11.88□□□□□ -0.51
GARNL3-219ENST00000495172 CRISPLD2Q9H0B8 497 aa11.88□□□□□ -0.51
GARNL3-219ENST00000495172 VEZTQ9HBM0 779 aa11.88□□□□□ -0.51
GARNL3-219ENST00000495172 COL3A1P02461 1466 aaPredicted RBP11.88□□□□□ -0.51
GARNL3-219ENST00000495172 ADCY3O60266 1144 aa11.87□□□□□ -0.51
GARNL3-219ENST00000495172 ABCB7O75027 752 aa11.87□□□□□ -0.51
GARNL3-219ENST00000495172 GNRH1P01148 92 aa11.87□□□□□ -0.51
GARNL3-219ENST00000495172 GTF2A2P52657 109 aa11.87□□□□□ -0.51
GARNL3-219ENST00000495172 CNGB1Q14028 1251 aaPredicted RBP11.87□□□□□ -0.51
GARNL3-219ENST00000495172 PDIA6Q15084 440 aa11.87□□□□□ -0.51
GARNL3-219ENST00000495172 TXNRD3Q86VQ6 643 aa11.87□□□□□ -0.51
GARNL3-219ENST00000495172 PPM1EQ8WY54 764 aa11.87□□□□□ -0.51
GARNL3-219ENST00000495172 WDFY4Q6ZS81 3184 aa11.87□□□□□ -0.51
GARNL3-219ENST00000495172 ECM29Q5VYK3 1845 aa11.86□□□□□ -0.51
GARNL3-219ENST00000495172 SF3B3Q15393 1217 aaKnown RBP11.86□□□□□ -0.51
GARNL3-219ENST00000495172 PAK6Q9NQU5 681 aaPredicted RBP11.86□□□□□ -0.51
GARNL3-219ENST00000495172 TAOK2Q9UL54 1235 aa11.86□□□□□ -0.51
GARNL3-219ENST00000495172 COL1A1P02452 1464 aaPredicted RBP11.85□□□□□ -0.51
GARNL3-219ENST00000495172 EIF2S2P20042 333 aaKnown RBP11.85□□□□□ -0.51
GARNL3-219ENST00000495172 KLRK1P26718 216 aa11.85□□□□□ -0.51
GARNL3-219ENST00000495172 EIF4A1P60842 406 aaKnown RBP11.85□□□□□ -0.51
GARNL3-219ENST00000495172 SLAIN1Q8ND83 568 aa11.85□□□□□ -0.51
GARNL3-219ENST00000495172 UHRF1Q96T88 793 aaPredicted RBP11.85□□□□□ -0.51
GARNL3-219ENST00000495172 LRFN3Q9BTN0 628 aa11.85□□□□□ -0.51
GARNL3-219ENST00000495172 PFASO15067 1338 aa11.85□□□□□ -0.51
GARNL3-219ENST00000495172 DOCK3Q8IZD9 2030 aa11.84□□□□□ -0.51
GARNL3-219ENST00000495172 SPEF2Q9C093 1822 aa11.84□□□□□ -0.51
GARNL3-219ENST00000495172 F8W031 263 aaPredicted RBP11.84□□□□□ -0.51
GARNL3-219ENST00000495172 ATP5J2-PTCD1G3V325 749 aa11.84□□□□□ -0.51
GARNL3-219ENST00000495172 HOXD10P28358 340 aa11.84□□□□□ -0.51
GARNL3-219ENST00000495172 RASA3Q14644 834 aa11.84□□□□□ -0.51
GARNL3-219ENST00000495172 TAF7Q15545 349 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 800.2 ms