RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 DNAAF4Q8WXU2 420 aa18.17■□□□□ 0.5
VARS-228ENST00000495010 VEZTQ9HBM0 779 aa18.17■□□□□ 0.5
VARS-228ENST00000495010 CHMP3Q9Y3E7 222 aa18.17■□□□□ 0.5
VARS-228ENST00000495010 UNCXA6NJT0 531 aa18.16■□□□□ 0.5
VARS-228ENST00000495010 IREB2P48200 963 aaKnown RBP18.16■□□□□ 0.5
VARS-228ENST00000495010 RBM5P52756 815 aaKnown RBP eCLIP18.16■□□□□ 0.5
VARS-228ENST00000495010 IFIT5Q13325 482 aaKnown RBP18.16■□□□□ 0.5
VARS-228ENST00000495010 MAP3K11Q16584 847 aa18.16■□□□□ 0.5
VARS-228ENST00000495010 CFAP100Q494V2 611 aa18.16■□□□□ 0.5
VARS-228ENST00000495010 MTMR14Q8NCE2 650 aa18.16■□□□□ 0.5
VARS-228ENST00000495010 HELBQ8NG08 1087 aaPredicted RBP18.16■□□□□ 0.5
VARS-228ENST00000495010 LINS1Q8NG48 757 aa18.16■□□□□ 0.5
VARS-228ENST00000495010 GCC1Q96CN9 775 aa18.16■□□□□ 0.5
VARS-228ENST00000495010 WNK4Q96J92 1243 aa18.16■□□□□ 0.5
VARS-228ENST00000495010 CLRN2A0PK11 232 aa18.15■□□□□ 0.5
VARS-228ENST00000495010 CASP7P55210 303 aa18.15■□□□□ 0.5
VARS-228ENST00000495010 INTS3Q68E01 1043 aaKnown RBP18.15■□□□□ 0.5
VARS-228ENST00000495010 CERS5Q8N5B7 392 aa18.15■□□□□ 0.5
VARS-228ENST00000495010 ERO1AQ96HE7 468 aa18.15■□□□□ 0.5
VARS-228ENST00000495010 CLMNQ96JQ2 1002 aa18.15■□□□□ 0.5
VARS-228ENST00000495010 CCDC27Q2M243 656 aa18.14■□□□□ 0.49
VARS-228ENST00000495010 TAF7LQ5H9L4 462 aa18.14■□□□□ 0.49
VARS-228ENST00000495010 C15orf52Q6ZUT6 534 aaKnown RBP18.14■□□□□ 0.49
VARS-228ENST00000495010 OTOP1Q7RTM1 612 aa18.14■□□□□ 0.49
VARS-228ENST00000495010 SPDYE2BA6NHP3 402 aa18.13■□□□□ 0.49
VARS-228ENST00000495010 SNAP23O00161 211 aa18.13■□□□□ 0.49
VARS-228ENST00000495010 SPDYE6P0CI01 402 aa18.13■□□□□ 0.49
VARS-228ENST00000495010 IL1R1P14778 569 aa18.13■□□□□ 0.49
VARS-228ENST00000495010 FKBP1AP62942 108 aaKnown RBP18.13■□□□□ 0.49
VARS-228ENST00000495010 WWC1Q8IX03 1113 aa18.13■□□□□ 0.49
VARS-228ENST00000495010 IGF2BP3O00425 579 aaKnown RBP eCLIP18.12■□□□□ 0.49
VARS-228ENST00000495010 PLIN1O60240 522 aa18.12■□□□□ 0.49
VARS-228ENST00000495010 NBPF12Q5TAG4 269 aaPredicted RBP18.12■□□□□ 0.49
VARS-228ENST00000495010 ANKRD13AQ8IZ07 590 aa18.12■□□□□ 0.49
VARS-228ENST00000495010 PRMT6Q96LA8 375 aaPredicted RBP18.12■□□□□ 0.49
VARS-228ENST00000495010 JAG2Q9Y219 1238 aa18.12■□□□□ 0.49
VARS-228ENST00000495010 PCDHAC2Q9Y5I4 1007 aa18.12■□□□□ 0.49
VARS-228ENST00000495010 TNFAIP1Q13829 316 aa18.11■□□□□ 0.49
VARS-228ENST00000495010 RASA3Q14644 834 aa18.11■□□□□ 0.49
VARS-228ENST00000495010 CCDC57Q2TAC2 916 aa18.11■□□□□ 0.49
VARS-228ENST00000495010 PTPN22Q9Y2R2 807 aa18.11■□□□□ 0.49
VARS-228ENST00000495010 IL16Q14005 1332 aa18.11■□□□□ 0.49
VARS-228ENST00000495010 ECM29Q5VYK3 1845 aa18.1■□□□□ 0.49
VARS-228ENST00000495010 SSC5DA1L4H1 1573 aa18.1■□□□□ 0.49
VARS-228ENST00000495010 IRS2Q9Y4H2 1338 aa18.1■□□□□ 0.49
VARS-228ENST00000495010 USP2O75604 605 aaPredicted RBP18.1■□□□□ 0.49
VARS-228ENST00000495010 FOXO4P98177 505 aa18.1■□□□□ 0.49
VARS-228ENST00000495010 CRHR2Q13324 411 aa18.1■□□□□ 0.49
VARS-228ENST00000495010 LDHAL6AQ6ZMR3 332 aa18.1■□□□□ 0.49
VARS-228ENST00000495010 CD99L2Q8TCZ2 262 aa18.1■□□□□ 0.49
VARS-228ENST00000495010 EFCC1Q9HA90 598 aa18.1■□□□□ 0.49
VARS-228ENST00000495010 CNNM1Q9NRU3 951 aa18.1■□□□□ 0.49
VARS-228ENST00000495010 SP3Q02447 781 aa18.09■□□□□ 0.49
VARS-228ENST00000495010 LMBR1LQ6UX01 489 aa18.09■□□□□ 0.49
VARS-228ENST00000495010 POTEFA5A3E0 1075 aa18.08■□□□□ 0.48
VARS-228ENST00000495010 ARHGEF6Q15052 776 aa18.08■□□□□ 0.48
VARS-228ENST00000495010 ELP3Q9H9T3 547 aa18.08■□□□□ 0.48
VARS-228ENST00000495010 FANCIQ9NVI1 1328 aa18.07■□□□□ 0.48
VARS-228ENST00000495010 MFSD14BQ5SR56 506 aa18.07■□□□□ 0.48
VARS-228ENST00000495010 OPTNQ96CV9 577 aa18.07■□□□□ 0.48
VARS-228ENST00000495010 ZNF594Q96JF6 807 aaPredicted RBP18.07■□□□□ 0.48
VARS-228ENST00000495010 TMEM106CQ9BVX2 250 aa18.07■□□□□ 0.48
VARS-228ENST00000495010 ZNF70Q9UC06 446 aaPredicted RBP18.07■□□□□ 0.48
VARS-228ENST00000495010 TTF2Q9UNY4 1162 aaKnown RBP18.07■□□□□ 0.48
VARS-228ENST00000495010 F6X3S4 739 aa18.06■□□□□ 0.48
VARS-228ENST00000495010 VAMP4O75379 141 aa18.06■□□□□ 0.48
VARS-228ENST00000495010 GJA5P36382 358 aa18.06■□□□□ 0.48
VARS-228ENST00000495010 TNNI2P48788 182 aa18.06■□□□□ 0.48
VARS-228ENST00000495010 BEND3Q5T5X7 828 aa18.06■□□□□ 0.48
VARS-228ENST00000495010 TDRD3Q9H7E2 651 aaKnown RBP18.06■□□□□ 0.48
VARS-228ENST00000495010 C9orf78Q9NZ63 289 aaPredicted RBP18.06■□□□□ 0.48
VARS-228ENST00000495010 SERPINA10Q9UK55 444 aa18.06■□□□□ 0.48
VARS-228ENST00000495010 FAM205AQ6ZU69 1335 aa18.05■□□□□ 0.48
VARS-228ENST00000495010 CACNA1FO60840 1977 aa18.05■□□□□ 0.48
VARS-228ENST00000495010 TESPA1A2RU30 521 aaPredicted RBP18.05■□□□□ 0.48
VARS-228ENST00000495010 WDHD1O75717 1129 aaPredicted RBP18.05■□□□□ 0.48
VARS-228ENST00000495010 HIBADHP31937 336 aaKnown RBP18.05■□□□□ 0.48
VARS-228ENST00000495010 SPDYE2Q495Y8 402 aa18.05■□□□□ 0.48
VARS-228ENST00000495010 PTPN18Q99952 460 aa18.05■□□□□ 0.48
VARS-228ENST00000495010 ZFYVE28Q9HCC9 887 aa18.05■□□□□ 0.48
VARS-228ENST00000495010 AOX1Q06278 1338 aa18.04■□□□□ 0.48
VARS-228ENST00000495010 TCP10L2B9ZVM9 353 aa18.04■□□□□ 0.48
VARS-228ENST00000495010 GRM8O00222 908 aa18.04■□□□□ 0.48
VARS-228ENST00000495010 EXOSC9Q06265 439 aaKnown RBP18.04■□□□□ 0.48
VARS-228ENST00000495010 UBE4AQ14139 1066 aa18.04■□□□□ 0.48
VARS-228ENST00000495010 NCBP3Q53F19 620 aaKnown RBP18.04■□□□□ 0.48
VARS-228ENST00000495010 HABP4Q5JVS0 413 aaKnown RBP18.04■□□□□ 0.48
VARS-228ENST00000495010 NBPF11Q86T75 865 aa18.04■□□□□ 0.48
VARS-228ENST00000495010 TDRD7Q8NHU6 1098 aaKnown RBP18.04■□□□□ 0.48
VARS-228ENST00000495010 ARMC5Q96C12 935 aa18.04■□□□□ 0.48
VARS-228ENST00000495010 SALL2Q9Y467 1007 aaPredicted RBP18.04■□□□□ 0.48
VARS-228ENST00000495010 CSADQ9Y600 493 aa18.04■□□□□ 0.48
VARS-228ENST00000495010 CCL15-CCL14A0A0B4J2E2 113 aa18.03■□□□□ 0.48
VARS-228ENST00000495010 GYG1P46976 350 aa18.03■□□□□ 0.48
VARS-228ENST00000495010 GTF2A2P52657 109 aa18.03■□□□□ 0.48
VARS-228ENST00000495010 MAP3K9P80192 1104 aa18.03■□□□□ 0.48
VARS-228ENST00000495010 TAF1CQ15572 869 aaPredicted RBP18.03■□□□□ 0.48
VARS-228ENST00000495010 CCL15Q16663 113 aa18.03■□□□□ 0.48
VARS-228ENST00000495010 CCDC184Q52MB2 194 aa18.03■□□□□ 0.48
VARS-228ENST00000495010 EPHA10Q5JZY3 1008 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms