RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 VPS72Q15906 364 aa12.35□□□□□ -0.43
SAMM50-206ENST00000494795 RNF214Q8ND24 703 aa12.35□□□□□ -0.43
SAMM50-206ENST00000494795 MPHOSPH8Q99549 860 aa12.35□□□□□ -0.43
SAMM50-206ENST00000494795 ZNF532Q9HCE3 1301 aa12.35□□□□□ -0.43
SAMM50-206ENST00000494795 ABCC12Q96J65 1359 aa12.35□□□□□ -0.43
SAMM50-206ENST00000494795 CELF1Q92879 486 aaKnown RBP12.35□□□□□ -0.43
SAMM50-206ENST00000494795 DSCC1Q9BVC3 393 aa12.35□□□□□ -0.43
SAMM50-206ENST00000494795 FTOQ9C0B1 505 aaKnown RBP eCLIP12.35□□□□□ -0.43
SAMM50-206ENST00000494795 DDX60Q8IY21 1712 aaKnown RBP12.35□□□□□ -0.43
SAMM50-206ENST00000494795 PRKAB2O43741 272 aa12.34□□□□□ -0.43
SAMM50-206ENST00000494795 EXOSC10Q01780 885 aaKnown RBP12.34□□□□□ -0.43
SAMM50-206ENST00000494795 CHRNDQ07001 517 aa12.34□□□□□ -0.43
SAMM50-206ENST00000494795 SH2B1Q9NRF2 756 aaPredicted RBP12.34□□□□□ -0.43
SAMM50-206ENST00000494795 GYG1P46976 350 aa12.34□□□□□ -0.43
SAMM50-206ENST00000494795 MRE11P49959 708 aa12.34□□□□□ -0.43
SAMM50-206ENST00000494795 FGD1P98174 961 aa12.34□□□□□ -0.43
SAMM50-206ENST00000494795 GUCY1B3Q02153 619 aa12.34□□□□□ -0.43
SAMM50-206ENST00000494795 L1TD1Q5T7N2 865 aaKnown RBP12.34□□□□□ -0.43
SAMM50-206ENST00000494795 GTF3C6Q969F1 213 aa12.34□□□□□ -0.43
SAMM50-206ENST00000494795 RRAGDQ9NQL2 400 aaPredicted RBP12.34□□□□□ -0.43
SAMM50-206ENST00000494795 FBXO3Q9UK99 471 aa12.34□□□□□ -0.43
SAMM50-206ENST00000494795 JAG2Q9Y219 1238 aa12.34□□□□□ -0.43
SAMM50-206ENST00000494795 SPDYE4A6NLX3 237 aa12.33□□□□□ -0.43
SAMM50-206ENST00000494795 GNPATO15228 680 aa12.33□□□□□ -0.43
SAMM50-206ENST00000494795 RXRAP19793 462 aa12.33□□□□□ -0.43
SAMM50-206ENST00000494795 ADD2P35612 726 aa12.33□□□□□ -0.43
SAMM50-206ENST00000494795 ANTXR2P58335 489 aa12.33□□□□□ -0.43
SAMM50-206ENST00000494795 ADGRA1Q86SQ6 560 aa12.33□□□□□ -0.43
SAMM50-206ENST00000494795 ZSCAN31Q96LW9 406 aaPredicted RBP12.33□□□□□ -0.43
SAMM50-206ENST00000494795 RFX7Q2KHR2 1363 aa12.33□□□□□ -0.44
SAMM50-206ENST00000494795 PUM3Q15397 648 aaKnown RBP12.33□□□□□ -0.44
SAMM50-206ENST00000494795 OTUD7BQ6GQQ9 843 aa12.33□□□□□ -0.44
SAMM50-206ENST00000494795 DHX32Q7L7V1 743 aaKnown RBP12.33□□□□□ -0.44
SAMM50-206ENST00000494795 TBC1D10CQ8IV04 446 aa12.33□□□□□ -0.44
SAMM50-206ENST00000494795 FNBP4Q8N3X1 1017 aaPredicted RBP12.33□□□□□ -0.44
SAMM50-206ENST00000494795 APPBP2Q92624 585 aa12.33□□□□□ -0.44
SAMM50-206ENST00000494795 TCRBV5S4A2TA0A5A2 114 aa12.33□□□□□ -0.44
SAMM50-206ENST00000494795 PDE6AP16499 860 aa12.33□□□□□ -0.44
SAMM50-206ENST00000494795 HSPA1LP34931 641 aa12.33□□□□□ -0.44
SAMM50-206ENST00000494795 EVX2Q03828 476 aa12.33□□□□□ -0.44
SAMM50-206ENST00000494795 MIGA1Q8NAN2 632 aa12.33□□□□□ -0.44
SAMM50-206ENST00000494795 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.33□□□□□ -0.44
SAMM50-206ENST00000494795 UBE2Q2LH0YL09 131 aa12.32□□□□□ -0.44
SAMM50-206ENST00000494795 RGL2O15211 777 aa12.32□□□□□ -0.44
SAMM50-206ENST00000494795 MAGEB6Q8N7X4 407 aa12.32□□□□□ -0.44
SAMM50-206ENST00000494795 SPATA5Q8NB90 893 aa12.32□□□□□ -0.44
SAMM50-206ENST00000494795 LPIN2Q92539 896 aa12.32□□□□□ -0.44
SAMM50-206ENST00000494795 APPP05067 770 aa12.32□□□□□ -0.44
SAMM50-206ENST00000494795 TTC6Q86TZ1 520 aa12.32□□□□□ -0.44
SAMM50-206ENST00000494795 ARMT1Q9H993 441 aa12.32□□□□□ -0.44
SAMM50-206ENST00000494795 LRRC4BQ9NT99 713 aa12.32□□□□□ -0.44
SAMM50-206ENST00000494795 ARID4AP29374 1257 aaPredicted RBP12.32□□□□□ -0.44
SAMM50-206ENST00000494795 CEBPZQ03701 1054 aaKnown RBP12.32□□□□□ -0.44
SAMM50-206ENST00000494795 EPB41L4AQ9HCS5 686 aaPredicted RBP12.32□□□□□ -0.44
SAMM50-206ENST00000494795 ZNF445P59923 1031 aa12.31□□□□□ -0.44
SAMM50-206ENST00000494795 PDIA3P30101 505 aaKnown RBP12.31□□□□□ -0.44
SAMM50-206ENST00000494795 CTDSPL2Q05D32 466 aa12.31□□□□□ -0.44
SAMM50-206ENST00000494795 CCDC152Q4G0S7 254 aa12.31□□□□□ -0.44
SAMM50-206ENST00000494795 CYB5R4Q7L1T6 521 aa12.31□□□□□ -0.44
SAMM50-206ENST00000494795 NSUN7Q8NE18 718 aaKnown RBP12.31□□□□□ -0.44
SAMM50-206ENST00000494795 ARHGEF1Q92888 912 aaKnown RBP12.31□□□□□ -0.44
SAMM50-206ENST00000494795 CCNL1Q9UK58 526 aaPredicted RBP12.31□□□□□ -0.44
SAMM50-206ENST00000494795 COL5A3P25940 1745 aaPredicted RBP12.31□□□□□ -0.44
SAMM50-206ENST00000494795 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.3□□□□□ -0.44
SAMM50-206ENST00000494795 KRT32Q14532 448 aa12.3□□□□□ -0.44
SAMM50-206ENST00000494795 MROH5Q6ZUA9 1318 aa12.3□□□□□ -0.44
SAMM50-206ENST00000494795 TXNRD3Q86VQ6 643 aa12.3□□□□□ -0.44
SAMM50-206ENST00000494795 CCDC144CPQ8IYA2 1237 aa12.3□□□□□ -0.44
SAMM50-206ENST00000494795 ALDH8A1Q9H2A2 487 aaPredicted RBP12.3□□□□□ -0.44
SAMM50-206ENST00000494795 LRP5O75197 1615 aa12.3□□□□□ -0.44
SAMM50-206ENST00000494795 COL1A1P02452 1464 aaPredicted RBP12.3□□□□□ -0.44
SAMM50-206ENST00000494795 MBD4O95243 580 aa12.3□□□□□ -0.44
SAMM50-206ENST00000494795 NASPP49321 788 aaPredicted RBP12.3□□□□□ -0.44
SAMM50-206ENST00000494795 LCORLQ8N3X6 602 aa12.3□□□□□ -0.44
SAMM50-206ENST00000494795 MPNDQ8N594 471 aa12.3□□□□□ -0.44
SAMM50-206ENST00000494795 BBXQ8WY36 941 aaPredicted RBP12.3□□□□□ -0.44
SAMM50-206ENST00000494795 SMARCC1Q92922 1105 aaPredicted RBP12.3□□□□□ -0.44
SAMM50-206ENST00000494795 MYL10Q9BUA6 226 aa12.3□□□□□ -0.44
SAMM50-206ENST00000494795 NEDD4P46934 1319 aa12.29□□□□□ -0.44
SAMM50-206ENST00000494795 PTPDC1A2A3K4 754 aa12.29□□□□□ -0.44
SAMM50-206ENST00000494795 FDPSP14324 419 aaKnown RBP12.29□□□□□ -0.44
SAMM50-206ENST00000494795 GTF2E1P29083 439 aaPredicted RBP12.29□□□□□ -0.44
SAMM50-206ENST00000494795 IGHMBP2P38935 993 aaKnown RBP12.29□□□□□ -0.44
SAMM50-206ENST00000494795 ANKRD1Q15327 319 aa12.29□□□□□ -0.44
SAMM50-206ENST00000494795 PARP10Q53GL7 1025 aa12.29□□□□□ -0.44
SAMM50-206ENST00000494795 MB21D2Q8IYB1 491 aaPredicted RBP12.29□□□□□ -0.44
SAMM50-206ENST00000494795 PKNOX2Q96KN3 472 aa12.29□□□□□ -0.44
SAMM50-206ENST00000494795 GPR101Q96P66 508 aaPredicted RBP12.29□□□□□ -0.44
SAMM50-206ENST00000494795 TFCP2L1Q9NZI6 479 aa12.29□□□□□ -0.44
SAMM50-206ENST00000494795 B4E1Z4 1266 aa12.29□□□□□ -0.44
SAMM50-206ENST00000494795 PRC1O43663 620 aa12.29□□□□□ -0.44
SAMM50-206ENST00000494795 ZNF384Q8TF68 577 aa12.29□□□□□ -0.44
SAMM50-206ENST00000494795 STRBPQ96SI9 672 aaKnown RBP12.29□□□□□ -0.44
SAMM50-206ENST00000494795 ABCF2Q9UG63 623 aa12.29□□□□□ -0.44
SAMM50-206ENST00000494795 RREB1Q92766 1687 aa12.29□□□□□ -0.44
SAMM50-206ENST00000494795 AFF2P51816 1311 aa12.28□□□□□ -0.44
SAMM50-206ENST00000494795 ECM2O94769 699 aaPredicted RBP12.28□□□□□ -0.44
SAMM50-206ENST00000494795 SLC5A1P13866 664 aa12.28□□□□□ -0.44
SAMM50-206ENST00000494795 LIG1P18858 919 aa12.28□□□□□ -0.44
SAMM50-206ENST00000494795 GIMAP6Q6P9H5 292 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms