RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 IQSEC3Q9UPP2 1182 aaPredicted RBP20.12■□□□□ 0.81
MSH5-SAPCD1-206ENST00000491552 JAG2Q9Y219 1238 aa20.12■□□□□ 0.81
MSH5-SAPCD1-206ENST00000491552 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.12■□□□□ 0.81
MSH5-SAPCD1-206ENST00000491552 HIRAP54198 1017 aaPredicted RBP20.11■□□□□ 0.81
MSH5-SAPCD1-206ENST00000491552 TIMM10P62072 90 aa20.11■□□□□ 0.81
MSH5-SAPCD1-206ENST00000491552 KIF4BQ2VIQ3 1234 aa20.11■□□□□ 0.81
MSH5-SAPCD1-206ENST00000491552 SIRT2Q8IXJ6 389 aa20.11■□□□□ 0.81
MSH5-SAPCD1-206ENST00000491552 EGFRP00533 1210 aa20.1■□□□□ 0.81
MSH5-SAPCD1-206ENST00000491552 ADORA1P30542 326 aa20.1■□□□□ 0.81
MSH5-SAPCD1-206ENST00000491552 CHAF1AQ13111 956 aaPredicted RBP20.1■□□□□ 0.81
MSH5-SAPCD1-206ENST00000491552 RBM26Q5T8P6 1007 aaKnown RBP20.1■□□□□ 0.81
MSH5-SAPCD1-206ENST00000491552 MAP1SQ66K74 1059 aaPredicted RBP20.1■□□□□ 0.81
MSH5-SAPCD1-206ENST00000491552 KIAA0825Q8IV33 1275 aa20.1■□□□□ 0.81
MSH5-SAPCD1-206ENST00000491552 OGFOD1Q8N543 542 aa20.1■□□□□ 0.81
MSH5-SAPCD1-206ENST00000491552 CERS5Q8N5B7 392 aa20.1■□□□□ 0.81
MSH5-SAPCD1-206ENST00000491552 MMP14P50281 582 aa20.09■□□□□ 0.81
MSH5-SAPCD1-206ENST00000491552 MFSD14BQ5SR56 506 aa20.09■□□□□ 0.81
MSH5-SAPCD1-206ENST00000491552 ERC1Q8IUD2 1116 aa20.09■□□□□ 0.81
MSH5-SAPCD1-206ENST00000491552 ZC3H15Q8WU90 426 aaKnown RBP20.09■□□□□ 0.81
MSH5-SAPCD1-206ENST00000491552 XAGE2Q96GT9 111 aa20.09■□□□□ 0.81
MSH5-SAPCD1-206ENST00000491552 CRBNQ96SW2 442 aa20.09■□□□□ 0.81
MSH5-SAPCD1-206ENST00000491552 MYOZ2Q9NPC6 264 aa20.09■□□□□ 0.81
MSH5-SAPCD1-206ENST00000491552 GPR108Q9NPR9 543 aa20.09■□□□□ 0.81
MSH5-SAPCD1-206ENST00000491552 GNL3LQ9NVN8 582 aaKnown RBP20.09■□□□□ 0.81
MSH5-SAPCD1-206ENST00000491552 HDAC9Q9UKV0 1011 aa20.09■□□□□ 0.81
MSH5-SAPCD1-206ENST00000491552 EXOC6BQ9Y2D4 811 aa20.09■□□□□ 0.81
MSH5-SAPCD1-206ENST00000491552 MYH13Q9UKX3 1938 aa20.08■□□□□ 0.81
MSH5-SAPCD1-206ENST00000491552 HSPA6P17066 643 aa20.08■□□□□ 0.81
MSH5-SAPCD1-206ENST00000491552 PHKA1P46020 1223 aa20.08■□□□□ 0.81
MSH5-SAPCD1-206ENST00000491552 HSP90AB4PQ58FF6 505 aa20.08■□□□□ 0.81
MSH5-SAPCD1-206ENST00000491552 CNTROBQ8N137 903 aa20.08■□□□□ 0.81
MSH5-SAPCD1-206ENST00000491552 NEUROD6Q96NK8 337 aa20.08■□□□□ 0.81
MSH5-SAPCD1-206ENST00000491552 COL1A1P02452 1464 aaPredicted RBP20.07■□□□□ 0.8
MSH5-SAPCD1-206ENST00000491552 TNNI3KQ59H18 835 aa20.07■□□□□ 0.8
MSH5-SAPCD1-206ENST00000491552 CCDC102BQ68D86 513 aa20.07■□□□□ 0.8
MSH5-SAPCD1-206ENST00000491552 TBC1D22AQ8WUA7 517 aa20.07■□□□□ 0.8
MSH5-SAPCD1-206ENST00000491552 PGAP2Q9UHJ9 254 aa20.07■□□□□ 0.8
MSH5-SAPCD1-206ENST00000491552 FPGT-TNNI3KV9GXZ4 949 aa20.07■□□□□ 0.8
MSH5-SAPCD1-206ENST00000491552 F8W031 263 aaPredicted RBP20.06■□□□□ 0.8
MSH5-SAPCD1-206ENST00000491552 SEMA3EO15041 775 aa20.06■□□□□ 0.8
MSH5-SAPCD1-206ENST00000491552 ZBTB22O15209 634 aa20.05■□□□□ 0.8
MSH5-SAPCD1-206ENST00000491552 ITGBL1O95965 494 aaPredicted RBP20.05■□□□□ 0.8
MSH5-SAPCD1-206ENST00000491552 GORABQ5T7V8 394 aa20.05■□□□□ 0.8
MSH5-SAPCD1-206ENST00000491552 DENND2AQ9ULE3 1009 aa20.05■□□□□ 0.8
MSH5-SAPCD1-206ENST00000491552 SUPT16HQ9Y5B9 1047 aaKnown RBP20.05■□□□□ 0.8
MSH5-SAPCD1-206ENST00000491552 PASKQ96RG2 1323 aa20.04■□□□□ 0.8
MSH5-SAPCD1-206ENST00000491552 SCARF1Q14162 830 aa20.04■□□□□ 0.8
MSH5-SAPCD1-206ENST00000491552 WDR66Q8TBY9 1149 aa20.04■□□□□ 0.8
MSH5-SAPCD1-206ENST00000491552 GGA3Q9NZ52 723 aa20.04■□□□□ 0.8
MSH5-SAPCD1-206ENST00000491552 RAB11FIP3O75154 756 aa20.03■□□□□ 0.8
MSH5-SAPCD1-206ENST00000491552 APLP1P51693 650 aa20.03■□□□□ 0.8
MSH5-SAPCD1-206ENST00000491552 RHPN1Q8TCX5 695 aa20.03■□□□□ 0.8
MSH5-SAPCD1-206ENST00000491552 TTF2Q9UNY4 1162 aaKnown RBP20.03■□□□□ 0.8
MSH5-SAPCD1-206ENST00000491552 WNT10BO00744 389 aa20.02■□□□□ 0.8
MSH5-SAPCD1-206ENST00000491552 RASGRF1Q13972 1273 aa20.02■□□□□ 0.8
MSH5-SAPCD1-206ENST00000491552 GRIK5Q16478 980 aa20.02■□□□□ 0.8
MSH5-SAPCD1-206ENST00000491552 DCPSQ96C86 337 aaKnown RBP20.02■□□□□ 0.8
MSH5-SAPCD1-206ENST00000491552 KIF1BPQ96EK5 621 aa20.02■□□□□ 0.8
MSH5-SAPCD1-206ENST00000491552 DBNDD2Q9BQY9 259 aa20.02■□□□□ 0.8
MSH5-SAPCD1-206ENST00000491552 SUGT1Q9Y2Z0 365 aa20.02■□□□□ 0.8
MSH5-SAPCD1-206ENST00000491552 ASTN2O75129 1339 aaPredicted RBP20.02■□□□□ 0.79
MSH5-SAPCD1-206ENST00000491552 PDS5AQ29RF7 1337 aaKnown RBP20.02■□□□□ 0.79
MSH5-SAPCD1-206ENST00000491552 APBB1O00213 710 aa20.01■□□□□ 0.79
MSH5-SAPCD1-206ENST00000491552 ARID4AP29374 1257 aaPredicted RBP20.01■□□□□ 0.79
MSH5-SAPCD1-206ENST00000491552 DLGAP5Q15398 846 aa20.01■□□□□ 0.79
MSH5-SAPCD1-206ENST00000491552 NBPF9Q3BBW0 867 aa20.01■□□□□ 0.79
MSH5-SAPCD1-206ENST00000491552 CFAP100Q494V2 611 aa20.01■□□□□ 0.79
MSH5-SAPCD1-206ENST00000491552 ANGEL2Q5VTE6 544 aaKnown RBP20.01■□□□□ 0.79
MSH5-SAPCD1-206ENST00000491552 CDC37L1Q7L3B6 337 aa20.01■□□□□ 0.79
MSH5-SAPCD1-206ENST00000491552 MTMR14Q8NCE2 650 aa20.01■□□□□ 0.79
MSH5-SAPCD1-206ENST00000491552 EAF2Q96CJ1 260 aaPredicted RBP20.01■□□□□ 0.79
MSH5-SAPCD1-206ENST00000491552 GLIS2Q9BZE0 524 aaPredicted RBP20.01■□□□□ 0.79
MSH5-SAPCD1-206ENST00000491552 PCDHB15Q9Y5E8 787 aa20.01■□□□□ 0.79
MSH5-SAPCD1-206ENST00000491552 MAST3O60307 1309 aa20.01■□□□□ 0.79
MSH5-SAPCD1-206ENST00000491552 PITPNM2Q9BZ72 1349 aa20.01■□□□□ 0.79
MSH5-SAPCD1-206ENST00000491552 UQCRFS1P1P0C7P4 283 aa20■□□□□ 0.79
MSH5-SAPCD1-206ENST00000491552 KRT26Q7Z3Y9 468 aa20■□□□□ 0.79
MSH5-SAPCD1-206ENST00000491552 ZBED3Q96IU2 234 aaPredicted RBP20■□□□□ 0.79
MSH5-SAPCD1-206ENST00000491552 CCDC8Q9H0W5 538 aaPredicted RBP20■□□□□ 0.79
MSH5-SAPCD1-206ENST00000491552 IL1RAPL2Q9NP60 686 aa20■□□□□ 0.79
MSH5-SAPCD1-206ENST00000491552 SERPINA10Q9UK55 444 aa20■□□□□ 0.79
MSH5-SAPCD1-206ENST00000491552 SALL1Q9NSC2 1324 aa20■□□□□ 0.79
MSH5-SAPCD1-206ENST00000491552 TRAF5O00463 557 aa19.99■□□□□ 0.79
MSH5-SAPCD1-206ENST00000491552 RBM5P52756 815 aaKnown RBP eCLIP19.99■□□□□ 0.79
MSH5-SAPCD1-206ENST00000491552 AAMPQ13685 434 aa19.99■□□□□ 0.79
MSH5-SAPCD1-206ENST00000491552 CCDC158Q5M9N0 1113 aa19.99■□□□□ 0.79
MSH5-SAPCD1-206ENST00000491552 TTC39AQ5SRH9 613 aa19.99■□□□□ 0.79
MSH5-SAPCD1-206ENST00000491552 USP48Q86UV5 1035 aa19.99■□□□□ 0.79
MSH5-SAPCD1-206ENST00000491552 AACSQ86V21 672 aa19.99■□□□□ 0.79
MSH5-SAPCD1-206ENST00000491552 CLASRPQ8N2M8 674 aaKnown RBP19.99■□□□□ 0.79
MSH5-SAPCD1-206ENST00000491552 ZGPATQ8N5A5 531 aaKnown RBP19.99■□□□□ 0.79
MSH5-SAPCD1-206ENST00000491552 TLR7Q9NYK1 1049 aaKnown RBP19.99■□□□□ 0.79
MSH5-SAPCD1-206ENST00000491552 DBNLQ9UJU6 430 aaKnown RBP19.99■□□□□ 0.79
MSH5-SAPCD1-206ENST00000491552 SPDYE2BA6NHP3 402 aa19.98■□□□□ 0.79
MSH5-SAPCD1-206ENST00000491552 SPDYE6P0CI01 402 aa19.98■□□□□ 0.79
MSH5-SAPCD1-206ENST00000491552 FMR1Q06787 632 aaKnown RBP eCLIP19.98■□□□□ 0.79
MSH5-SAPCD1-206ENST00000491552 SULF1Q8IWU6 871 aa19.98■□□□□ 0.79
MSH5-SAPCD1-206ENST00000491552 HMG20BQ9P0W2 317 aa19.98■□□□□ 0.79
MSH5-SAPCD1-206ENST00000491552 PCDHAC2Q9Y5I4 1007 aa19.98■□□□□ 0.79
MSH5-SAPCD1-206ENST00000491552 ECM29Q5VYK3 1845 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms