RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 C8orf86Q6ZUL3 223 aa6.55□□□□□ -1.36
CD46-216ENST00000490278 C3orf58Q8NDZ4 430 aa6.55□□□□□ -1.36
CD46-216ENST00000490278 AKAP2Q9Y2D5 859 aa6.55□□□□□ -1.36
CD46-216ENST00000490278 XP32Q5T750 250 aa6.54□□□□□ -1.36
CD46-216ENST00000490278 IL22RA1Q8N6P7 574 aa6.54□□□□□ -1.36
CD46-216ENST00000490278 TMEM87AQ8NBN3 555 aa6.54□□□□□ -1.36
CD46-216ENST00000490278 MUC3BQ9H195 1237 aa6.54□□□□□ -1.36
CD46-216ENST00000490278 RRAGCQ9HB90 399 aa6.54□□□□□ -1.36
CD46-216ENST00000490278 SH2B1Q9NRF2 756 aaPredicted RBP6.54□□□□□ -1.36
CD46-216ENST00000490278 PPM1HQ9ULR3 514 aa6.54□□□□□ -1.36
CD46-216ENST00000490278 SOX13Q9UN79 622 aa6.54□□□□□ -1.36
CD46-216ENST00000490278 ARHGEF15O94989 841 aa6.53□□□□□ -1.36
CD46-216ENST00000490278 DGKGP49619 791 aa6.53□□□□□ -1.36
CD46-216ENST00000490278 CABP4P57796 275 aa6.53□□□□□ -1.36
CD46-216ENST00000490278 TAF1CQ15572 869 aaPredicted RBP6.53□□□□□ -1.36
CD46-216ENST00000490278 RPS26P11Q5JNZ5 115 aaPredicted RBP6.53□□□□□ -1.36
CD46-216ENST00000490278 LDLRAD1Q5T700 205 aa6.53□□□□□ -1.36
CD46-216ENST00000490278 WFDC8Q8IUA0 241 aa6.53□□□□□ -1.36
CD46-216ENST00000490278 CLEC4MQ9H2X3 399 aaPredicted RBP6.53□□□□□ -1.36
CD46-216ENST00000490278 ZNF576Q9H609 170 aa6.53□□□□□ -1.36
CD46-216ENST00000490278 PPME1Q9Y570 386 aa6.53□□□□□ -1.36
CD46-216ENST00000490278 USP31Q70CQ4 1352 aa6.53□□□□□ -1.36
CD46-216ENST00000490278 IGHA1P01876 353 aa6.52□□□□□ -1.37
CD46-216ENST00000490278 HOXB4P17483 251 aaPredicted RBP6.52□□□□□ -1.37
CD46-216ENST00000490278 EPHA1P21709 976 aa6.52□□□□□ -1.37
CD46-216ENST00000490278 BAG6P46379 1132 aa6.52□□□□□ -1.37
CD46-216ENST00000490278 ST13P50502 369 aaKnown RBP6.52□□□□□ -1.37
CD46-216ENST00000490278 MEI1Q5TIA1 1274 aa6.52□□□□□ -1.37
CD46-216ENST00000490278 MSL1Q68DK7 614 aa6.52□□□□□ -1.37
CD46-216ENST00000490278 GPAT2Q6NUI2 795 aa6.52□□□□□ -1.37
CD46-216ENST00000490278 VN1R5Q7Z5H4 357 aa6.52□□□□□ -1.37
CD46-216ENST00000490278 ANKRD24Q8TF21 1146 aa6.52□□□□□ -1.37
CD46-216ENST00000490278 TTF2Q9UNY4 1162 aaKnown RBP6.52□□□□□ -1.37
CD46-216ENST00000490278 SCAMP3O14828 347 aaKnown RBP6.51□□□□□ -1.37
CD46-216ENST00000490278 NID1P14543 1247 aa6.51□□□□□ -1.37
CD46-216ENST00000490278 PCDH1Q08174 1060 aa6.51□□□□□ -1.37
CD46-216ENST00000490278 COL9A3Q14050 684 aaPredicted RBP6.51□□□□□ -1.37
CD46-216ENST00000490278 H3BRJ5 948 aa6.5□□□□□ -1.37
CD46-216ENST00000490278 ESRRAP11474 423 aaPredicted RBP6.5□□□□□ -1.37
CD46-216ENST00000490278 TCF3P15923 654 aa6.5□□□□□ -1.37
CD46-216ENST00000490278 CDC25BP30305 580 aa6.5□□□□□ -1.37
CD46-216ENST00000490278 IKBKEQ14164 716 aa6.5□□□□□ -1.37
CD46-216ENST00000490278 FAM117BQ6P1L5 589 aa6.5□□□□□ -1.37
CD46-216ENST00000490278 TPTE2Q6XPS3 522 aa6.5□□□□□ -1.37
CD46-216ENST00000490278 CEP44Q9C0F1 390 aa6.5□□□□□ -1.37
CD46-216ENST00000490278 SEC31BQ9NQW1 1179 aa6.5□□□□□ -1.37
CD46-216ENST00000490278 METTL5Q9NRN9 209 aaKnown RBP6.5□□□□□ -1.37
CD46-216ENST00000490278 LINC01387J3KSC0 135 aa6.49□□□□□ -1.37
CD46-216ENST00000490278 B3GALT4O96024 378 aa6.49□□□□□ -1.37
CD46-216ENST00000490278 ZNF76P36508 570 aa6.49□□□□□ -1.37
CD46-216ENST00000490278 SNRPNP63162 240 aaKnown RBP6.49□□□□□ -1.37
CD46-216ENST00000490278 FANCCQ00597 558 aa6.49□□□□□ -1.37
CD46-216ENST00000490278 FAAP100Q0VG06 881 aa6.49□□□□□ -1.37
CD46-216ENST00000490278 ZNF423Q2M1K9 1284 aa6.49□□□□□ -1.37
CD46-216ENST00000490278 TXNDC11Q6PKC3 985 aa6.49□□□□□ -1.37
CD46-216ENST00000490278 DMRTC2Q8IXT2 367 aaPredicted RBP6.49□□□□□ -1.37
CD46-216ENST00000490278 IGSF5Q9NSI5 407 aa6.49□□□□□ -1.37
CD46-216ENST00000490278 GPN3Q9UHW5 284 aaPredicted RBP6.49□□□□□ -1.37
CD46-216ENST00000490278 PIK3R2O00459 728 aa6.48□□□□□ -1.37
CD46-216ENST00000490278 SOX1O00570 391 aaPredicted RBP6.48□□□□□ -1.37
CD46-216ENST00000490278 FBXO24O75426 580 aa6.48□□□□□ -1.37
CD46-216ENST00000490278 PIP4K2BP78356 416 aa6.48□□□□□ -1.37
CD46-216ENST00000490278 PPP2R3AQ06190 1150 aa6.48□□□□□ -1.37
CD46-216ENST00000490278 CCDC85BQ15834 202 aaPredicted RBP6.48□□□□□ -1.37
CD46-216ENST00000490278 TRAPPC3LQ5T215 181 aa6.48□□□□□ -1.37
CD46-216ENST00000490278 LINC00114Q6XXX2 140 aa6.48□□□□□ -1.37
CD46-216ENST00000490278 ILDR2Q71H61 639 aa6.48□□□□□ -1.37
CD46-216ENST00000490278 SV2BQ7L1I2 683 aa6.48□□□□□ -1.37
CD46-216ENST00000490278 WNT8BQ93098 351 aa6.48□□□□□ -1.37
CD46-216ENST00000490278 RNF34Q969K3 372 aa6.48□□□□□ -1.37
CD46-216ENST00000490278 NECAB3Q96P71 396 aaPredicted RBP6.48□□□□□ -1.37
CD46-216ENST00000490278 NOC4LQ9BVI4 516 aaKnown RBP6.48□□□□□ -1.37
CD46-216ENST00000490278 SRA1Q9HD15 236 aaKnown RBP6.48□□□□□ -1.37
CD46-216ENST00000490278 TMEM39AQ9NV64 488 aa6.48□□□□□ -1.37
CD46-216ENST00000490278 MKL2Q9ULH7 1088 aa6.48□□□□□ -1.37
CD46-216ENST00000490278 GNB5O14775 395 aa6.47□□□□□ -1.37
CD46-216ENST00000490278 FSCN2O14926 492 aa6.47□□□□□ -1.37
CD46-216ENST00000490278 RANGAP1P46060 587 aaPredicted RBP6.47□□□□□ -1.37
CD46-216ENST00000490278 ARL4DP49703 201 aa6.47□□□□□ -1.37
CD46-216ENST00000490278 ZNF157P51786 506 aaPredicted RBP6.47□□□□□ -1.37
CD46-216ENST00000490278 HS2ST1Q7LGA3 356 aa6.47□□□□□ -1.37
CD46-216ENST00000490278 MAP4K3Q8IVH8 894 aa6.47□□□□□ -1.37
CD46-216ENST00000490278 DTWD1Q8N5C7 304 aa6.47□□□□□ -1.37
CD46-216ENST00000490278 DDX54Q8TDD1 881 aaKnown RBP6.47□□□□□ -1.37
CD46-216ENST00000490278 SLC7A3Q8WY07 619 aa6.47□□□□□ -1.37
CD46-216ENST00000490278 TRIM11Q96F44 468 aa6.47□□□□□ -1.37
CD46-216ENST00000490278 SOX17Q9H6I2 414 aaPredicted RBP6.47□□□□□ -1.37
CD46-216ENST00000490278 OSGEPQ9NPF4 335 aa6.47□□□□□ -1.37
CD46-216ENST00000490278 SPDYE3A6NKU9 549 aa6.46□□□□□ -1.38
CD46-216ENST00000490278 ENC1O14682 589 aa6.46□□□□□ -1.38
CD46-216ENST00000490278 EIF4EBP3O60516 100 aaPredicted RBP6.46□□□□□ -1.38
CD46-216ENST00000490278 HDLBPQ00341 1268 aaKnown RBP6.46□□□□□ -1.38
CD46-216ENST00000490278 C19orf57Q0VDD7 668 aa6.46□□□□□ -1.38
CD46-216ENST00000490278 SETDB1Q15047 1291 aa6.46□□□□□ -1.38
CD46-216ENST00000490278 PODNQ7Z5L7 613 aa6.46□□□□□ -1.38
CD46-216ENST00000490278 KLHL23Q8NBE8 558 aa6.46□□□□□ -1.38
CD46-216ENST00000490278 PLVAPQ9BX97 442 aa6.46□□□□□ -1.38
CD46-216ENST00000490278 KRTAP4-8Q9BYQ9 185 aa6.46□□□□□ -1.38
CD46-216ENST00000490278 A0A0A0MRY4 1105 aa6.45□□□□□ -1.38
CD46-216ENST00000490278 CELA3AP09093 270 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms