RNA–Protein interactions for RNA: ENST00000489502.5

HLA-F-229, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-229ENST00000489502 POTEJP0CG39 1038 aa17.75■□□□□ 0.43
HLA-F-229ENST00000489502 RPS12P25398 132 aaKnown RBP17.75■□□□□ 0.43
HLA-F-229ENST00000489502 EPHX2P34913 555 aa17.75■□□□□ 0.43
HLA-F-229ENST00000489502 CCDC102BQ68D86 513 aa17.75■□□□□ 0.43
HLA-F-229ENST00000489502 EAF2Q96CJ1 260 aaPredicted RBP17.75■□□□□ 0.43
HLA-F-229ENST00000489502 KIF1BPQ96EK5 621 aa17.75■□□□□ 0.43
HLA-F-229ENST00000489502 GPR108Q9NPR9 543 aa17.75■□□□□ 0.43
HLA-F-229ENST00000489502 CENPBP07199 599 aaPredicted RBP17.74■□□□□ 0.43
HLA-F-229ENST00000489502 EAPPQ56P03 285 aaPredicted RBP17.74■□□□□ 0.43
HLA-F-229ENST00000489502 GORABQ5T7V8 394 aa17.74■□□□□ 0.43
HLA-F-229ENST00000489502 AACSQ86V21 672 aa17.74■□□□□ 0.43
HLA-F-229ENST00000489502 TRPM4Q8TD43 1214 aa17.74■□□□□ 0.43
HLA-F-229ENST00000489502 GMLQ99445 158 aa17.74■□□□□ 0.43
HLA-F-229ENST00000489502 CCDC8Q9H0W5 538 aaPredicted RBP17.74■□□□□ 0.43
HLA-F-229ENST00000489502 CNOT7Q9UIV1 285 aaKnown RBP17.74■□□□□ 0.43
HLA-F-229ENST00000489502 DBNLQ9UJU6 430 aaKnown RBP17.74■□□□□ 0.43
HLA-F-229ENST00000489502 FAM205AQ6ZU69 1335 aa17.73■□□□□ 0.43
HLA-F-229ENST00000489502 SMARCA5O60264 1052 aaPredicted RBP17.73■□□□□ 0.43
HLA-F-229ENST00000489502 RAB11FIP3O75154 756 aa17.73■□□□□ 0.43
HLA-F-229ENST00000489502 RASGRF1Q13972 1273 aa17.73■□□□□ 0.43
HLA-F-229ENST00000489502 MFSD14BQ5SR56 506 aa17.73■□□□□ 0.43
HLA-F-229ENST00000489502 KIAA0825Q8IV33 1275 aa17.73■□□□□ 0.43
HLA-F-229ENST00000489502 C16orf71Q8IYS4 520 aaPredicted RBP17.73■□□□□ 0.43
HLA-F-229ENST00000489502 AGBL3Q8NEM8 1001 aa17.73■□□□□ 0.43
HLA-F-229ENST00000489502 DPF2Q92785 391 aa17.73■□□□□ 0.43
HLA-F-229ENST00000489502 MYO3BQ8WXR4 1341 aa17.72■□□□□ 0.43
HLA-F-229ENST00000489502 F8W031 263 aaPredicted RBP17.72■□□□□ 0.43
HLA-F-229ENST00000489502 EGFRP00533 1210 aa17.72■□□□□ 0.43
HLA-F-229ENST00000489502 AAMPQ13685 434 aa17.72■□□□□ 0.43
HLA-F-229ENST00000489502 PI16Q6UXB8 463 aa17.72■□□□□ 0.43
HLA-F-229ENST00000489502 DCTPP1Q9H773 170 aa17.72■□□□□ 0.43
HLA-F-229ENST00000489502 GNL3LQ9NVN8 582 aaKnown RBP17.72■□□□□ 0.43
HLA-F-229ENST00000489502 GRIK5Q16478 980 aa17.71■□□□□ 0.43
HLA-F-229ENST00000489502 TBC1D10BQ4KMP7 808 aaPredicted RBP17.71■□□□□ 0.43
HLA-F-229ENST00000489502 SAMD7Q7Z3H4 446 aa17.71■□□□□ 0.43
HLA-F-229ENST00000489502 LRRCC1Q9C099 1032 aa17.71■□□□□ 0.43
HLA-F-229ENST00000489502 ADARB2Q9NS39 739 aaKnown RBP17.71■□□□□ 0.43
HLA-F-229ENST00000489502 AKAP11Q9UKA4 1901 aa17.7■□□□□ 0.42
HLA-F-229ENST00000489502 H7C1D1 291 aa17.7■□□□□ 0.42
HLA-F-229ENST00000489502 USP17L8P0C7I0 530 aa17.7■□□□□ 0.42
HLA-F-229ENST00000489502 HDAC1Q13547 482 aaPredicted RBP17.7■□□□□ 0.42
HLA-F-229ENST00000489502 SCARF1Q14162 830 aa17.7■□□□□ 0.42
HLA-F-229ENST00000489502 TTC39AQ5SRH9 613 aa17.7■□□□□ 0.42
HLA-F-229ENST00000489502 RBM26Q5T8P6 1007 aaKnown RBP17.7■□□□□ 0.42
HLA-F-229ENST00000489502 CLASRPQ8N2M8 674 aaKnown RBP17.7■□□□□ 0.42
HLA-F-229ENST00000489502 ARID4AP29374 1257 aaPredicted RBP17.69■□□□□ 0.42
HLA-F-229ENST00000489502 ZNF280AP59817 542 aaPredicted RBP17.69■□□□□ 0.42
HLA-F-229ENST00000489502 FKBP1AP62942 108 aaKnown RBP17.69■□□□□ 0.42
HLA-F-229ENST00000489502 KIF4BQ2VIQ3 1234 aa17.69■□□□□ 0.42
HLA-F-229ENST00000489502 DENND2AQ9ULE3 1009 aa17.69■□□□□ 0.42
HLA-F-229ENST00000489502 SEMA3EO15041 775 aa17.68■□□□□ 0.42
HLA-F-229ENST00000489502 MCAMP43121 646 aa17.68■□□□□ 0.42
HLA-F-229ENST00000489502 HIRAP54198 1017 aaPredicted RBP17.68■□□□□ 0.42
HLA-F-229ENST00000489502 HMG20BQ9P0W2 317 aa17.68■□□□□ 0.42
HLA-F-229ENST00000489502 MAST2Q6P0Q8 1798 aa17.67■□□□□ 0.42
HLA-F-229ENST00000489502 TOMM70O94826 608 aa17.67■□□□□ 0.42
HLA-F-229ENST00000489502 IFIT2P09913 472 aaKnown RBP17.67■□□□□ 0.42
HLA-F-229ENST00000489502 CCDC158Q5M9N0 1113 aa17.67■□□□□ 0.42
HLA-F-229ENST00000489502 USP50Q70EL3 339 aaPredicted RBP17.67■□□□□ 0.42
HLA-F-229ENST00000489502 PNMA8AQ86V59 439 aaPredicted RBP17.67■□□□□ 0.42
HLA-F-229ENST00000489502 LDHDQ86WU2 507 aa17.67■□□□□ 0.42
HLA-F-229ENST00000489502 WDR66Q8TBY9 1149 aa17.67■□□□□ 0.42
HLA-F-229ENST00000489502 TBC1D22AQ8WUA7 517 aa17.67■□□□□ 0.42
HLA-F-229ENST00000489502 MYOZ2Q9NPC6 264 aa17.67■□□□□ 0.42
HLA-F-229ENST00000489502 SNRKQ9NRH2 765 aa17.67■□□□□ 0.42
HLA-F-229ENST00000489502 TTF2Q9UNY4 1162 aaKnown RBP17.67■□□□□ 0.42
HLA-F-229ENST00000489502 CLEC11AQ9Y240 323 aa17.67■□□□□ 0.42
HLA-F-229ENST00000489502 PCDHAC2Q9Y5I4 1007 aa17.67■□□□□ 0.42
HLA-F-229ENST00000489502 ASTN2O75129 1339 aaPredicted RBP17.67■□□□□ 0.42
HLA-F-229ENST00000489502 IGHDP01880 384 aa17.66■□□□□ 0.42
HLA-F-229ENST00000489502 UQCRFS1P1P0C7P4 283 aa17.66■□□□□ 0.42
HLA-F-229ENST00000489502 PRDX5P30044 214 aa17.66■□□□□ 0.42
HLA-F-229ENST00000489502 OGFOD1Q8N543 542 aa17.66■□□□□ 0.42
HLA-F-229ENST00000489502 SPATA5Q8NB90 893 aa17.66■□□□□ 0.42
HLA-F-229ENST00000489502 RBM46Q8TBY0 533 aaKnown RBP17.66■□□□□ 0.42
HLA-F-229ENST00000489502 HDAC9Q9UKV0 1011 aa17.66■□□□□ 0.42
HLA-F-229ENST00000489502 MYO5AQ9Y4I1 1855 aaKnown RBP17.66■□□□□ 0.42
HLA-F-229ENST00000489502 PDS5AQ29RF7 1337 aaKnown RBP17.66■□□□□ 0.42
HLA-F-229ENST00000489502 MAP1SQ66K74 1059 aaPredicted RBP17.65■□□□□ 0.42
HLA-F-229ENST00000489502 RWDD1Q9H446 243 aaPredicted RBP17.65■□□□□ 0.42
HLA-F-229ENST00000489502 NDUFB9Q9Y6M9 179 aa17.65■□□□□ 0.42
HLA-F-229ENST00000489502 ECM29Q5VYK3 1845 aa17.65■□□□□ 0.42
HLA-F-229ENST00000489502 CHADLQ6NUI6 762 aa17.64■□□□□ 0.41
HLA-F-229ENST00000489502 SMC1BQ8NDV3 1235 aa17.64■□□□□ 0.41
HLA-F-229ENST00000489502 GCC1Q96CN9 775 aa17.64■□□□□ 0.41
HLA-F-229ENST00000489502 GGA3Q9NZ52 723 aa17.64■□□□□ 0.41
HLA-F-229ENST00000489502 ABCF2Q9UG63 623 aa17.64■□□□□ 0.41
HLA-F-229ENST00000489502 AOX1Q06278 1338 aa17.64■□□□□ 0.41
HLA-F-229ENST00000489502 SALL1Q9NSC2 1324 aa17.64■□□□□ 0.41
HLA-F-229ENST00000489502 ZBTB22O15209 634 aa17.63■□□□□ 0.41
HLA-F-229ENST00000489502 ZAP70P43403 619 aa17.63■□□□□ 0.41
HLA-F-229ENST00000489502 NBPF9Q3BBW0 867 aa17.63■□□□□ 0.41
HLA-F-229ENST00000489502 CFAP100Q494V2 611 aa17.63■□□□□ 0.41
HLA-F-229ENST00000489502 TSHZ3Q63HK5 1081 aa17.63■□□□□ 0.41
HLA-F-229ENST00000489502 TBC1D9Q6ZT07 1266 aa17.63■□□□□ 0.41
HLA-F-229ENST00000489502 OTUD7AQ8TE49 926 aaPredicted RBP17.63■□□□□ 0.41
HLA-F-229ENST00000489502 ZNF512BQ96KM6 892 aaPredicted RBP17.63■□□□□ 0.41
HLA-F-229ENST00000489502 DOCK2Q92608 1830 aa17.63■□□□□ 0.41
HLA-F-229ENST00000489502 LDHBP07195 334 aaKnown RBP17.62■□□□□ 0.41
HLA-F-229ENST00000489502 NEFLP07196 543 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms