RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 CD2BP2O95400 341 aaKnown RBP10.19□□□□□ -0.78
VTI1A-207ENST00000489357 MMP10P09238 476 aa10.19□□□□□ -0.78
VTI1A-207ENST00000489357 TRIM28Q13263 835 aaKnown RBP10.19□□□□□ -0.78
VTI1A-207ENST00000489357 CUL4AQ13619 759 aa10.19□□□□□ -0.78
VTI1A-207ENST00000489357 L1TD1Q5T7N2 865 aaKnown RBP10.19□□□□□ -0.78
VTI1A-207ENST00000489357 POTEGQ6S5H5 508 aa10.19□□□□□ -0.78
VTI1A-207ENST00000489357 TTLL7Q6ZT98 887 aa10.19□□□□□ -0.78
VTI1A-207ENST00000489357 NUTM1Q86Y26 1132 aa10.19□□□□□ -0.78
VTI1A-207ENST00000489357 DIAPH3Q9NSV4 1193 aa10.19□□□□□ -0.78
VTI1A-207ENST00000489357 CD2APQ9Y5K6 639 aa10.19□□□□□ -0.78
VTI1A-207ENST00000489357 BRCA1P38398 1863 aaKnown RBP10.19□□□□□ -0.78
VTI1A-207ENST00000489357 POTEMA6NI47 508 aa10.18□□□□□ -0.78
VTI1A-207ENST00000489357 H7C1W4 665 aa10.18□□□□□ -0.78
VTI1A-207ENST00000489357 SASH1O94885 1247 aa10.18□□□□□ -0.78
VTI1A-207ENST00000489357 CYP2E1P05181 493 aaPredicted RBP10.18□□□□□ -0.78
VTI1A-207ENST00000489357 CASP7P55210 303 aa10.18□□□□□ -0.78
VTI1A-207ENST00000489357 HLFQ16534 295 aa10.18□□□□□ -0.78
VTI1A-207ENST00000489357 TBC1D9BQ66K14 1250 aa10.18□□□□□ -0.78
VTI1A-207ENST00000489357 GIGYF2Q6Y7W6 1299 aaKnown RBP10.18□□□□□ -0.78
VTI1A-207ENST00000489357 AACSQ86V21 672 aa10.18□□□□□ -0.78
VTI1A-207ENST00000489357 NLGN2Q8NFZ4 835 aa10.18□□□□□ -0.78
VTI1A-207ENST00000489357 KCNB2Q92953 911 aa10.18□□□□□ -0.78
VTI1A-207ENST00000489357 TNPO1Q92973 898 aaKnown RBP10.18□□□□□ -0.78
VTI1A-207ENST00000489357 TM6SF1Q9BZW5 370 aa10.18□□□□□ -0.78
VTI1A-207ENST00000489357 CWC25Q9NXE8 425 aaPredicted RBP10.18□□□□□ -0.78
VTI1A-207ENST00000489357 ANKRD31Q8N7Z5 1873 aa10.18□□□□□ -0.78
VTI1A-207ENST00000489357 ANKRD36CQ5JPF3 1778 aa10.18□□□□□ -0.78
VTI1A-207ENST00000489357 CIAO1O76071 339 aa10.17□□□□□ -0.78
VTI1A-207ENST00000489357 ATP5JP18859 108 aa10.17□□□□□ -0.78
VTI1A-207ENST00000489357 NEK4P51957 841 aa10.17□□□□□ -0.78
VTI1A-207ENST00000489357 PRSS12P56730 875 aa10.17□□□□□ -0.78
VTI1A-207ENST00000489357 ZNF34Q8IZ26 560 aa10.17□□□□□ -0.78
VTI1A-207ENST00000489357 C10orf71Q711Q0 1435 aa10.16□□□□□ -0.78
VTI1A-207ENST00000489357 TRAK2O60296 914 aa10.16□□□□□ -0.78
VTI1A-207ENST00000489357 RFX5P48382 616 aaPredicted RBP10.16□□□□□ -0.78
VTI1A-207ENST00000489357 HSP90AB3PQ58FF7 597 aa10.16□□□□□ -0.78
VTI1A-207ENST00000489357 DMRTA1Q5VZB9 504 aa10.16□□□□□ -0.78
VTI1A-207ENST00000489357 TSHZ3Q63HK5 1081 aa10.16□□□□□ -0.78
VTI1A-207ENST00000489357 KRI1Q8N9T8 703 aaKnown RBP10.16□□□□□ -0.78
VTI1A-207ENST00000489357 EAF2Q96CJ1 260 aaPredicted RBP10.16□□□□□ -0.78
VTI1A-207ENST00000489357 LSG1Q9H089 658 aaKnown RBP10.16□□□□□ -0.78
VTI1A-207ENST00000489357 RBM27Q9P2N5 1060 aaKnown RBP10.16□□□□□ -0.78
VTI1A-207ENST00000489357 KLRG2A4D1S0 409 aaPredicted RBP10.15□□□□□ -0.78
VTI1A-207ENST00000489357 SERPINB2P05120 415 aa10.15□□□□□ -0.78
VTI1A-207ENST00000489357 ZKSCAN1P17029 563 aaPredicted RBP10.15□□□□□ -0.78
VTI1A-207ENST00000489357 KCNA3P22001 575 aa10.15□□□□□ -0.78
VTI1A-207ENST00000489357 FECHP22830 423 aa10.15□□□□□ -0.78
VTI1A-207ENST00000489357 IL15P40933 162 aaPredicted RBP10.15□□□□□ -0.78
VTI1A-207ENST00000489357 PTPN12Q05209 780 aaKnown RBP10.15□□□□□ -0.78
VTI1A-207ENST00000489357 RNF20Q5VTR2 975 aa10.15□□□□□ -0.78
VTI1A-207ENST00000489357 PADI6Q6TGC4 694 aa10.15□□□□□ -0.78
VTI1A-207ENST00000489357 UBE3BQ7Z3V4 1068 aa10.15□□□□□ -0.78
VTI1A-207ENST00000489357 ZBED2Q9BTP6 218 aa10.15□□□□□ -0.78
VTI1A-207ENST00000489357 PLA2G12BQ9BX93 195 aa10.15□□□□□ -0.78
VTI1A-207ENST00000489357 HMG20BQ9P0W2 317 aa10.15□□□□□ -0.78
VTI1A-207ENST00000489357 PARP3Q9Y6F1 533 aa10.15□□□□□ -0.78
VTI1A-207ENST00000489357 ABCC12Q96J65 1359 aa10.14□□□□□ -0.79
VTI1A-207ENST00000489357 DLEC1Q9Y238 1755 aa10.14□□□□□ -0.79
VTI1A-207ENST00000489357 TGFB2P61812 414 aa10.14□□□□□ -0.79
VTI1A-207ENST00000489357 FOXO4P98177 505 aa10.14□□□□□ -0.79
VTI1A-207ENST00000489357 TCIRG1Q13488 830 aa10.14□□□□□ -0.79
VTI1A-207ENST00000489357 TSGA10IPQ3SY00 556 aa10.14□□□□□ -0.79
VTI1A-207ENST00000489357 TNNI3KQ59H18 835 aa10.14□□□□□ -0.79
VTI1A-207ENST00000489357 KIF6Q6ZMV9 814 aa10.14□□□□□ -0.79
VTI1A-207ENST00000489357 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.14□□□□□ -0.79
VTI1A-207ENST00000489357 TMX3Q96JJ7 454 aa10.14□□□□□ -0.79
VTI1A-207ENST00000489357 ZSCAN31Q96LW9 406 aaPredicted RBP10.14□□□□□ -0.79
VTI1A-207ENST00000489357 SETDB2Q96T68 719 aa10.14□□□□□ -0.79
VTI1A-207ENST00000489357 ISCA1Q9BUE6 129 aa10.14□□□□□ -0.79
VTI1A-207ENST00000489357 ALDH8A1Q9H2A2 487 aaPredicted RBP10.14□□□□□ -0.79
VTI1A-207ENST00000489357 SH2B1Q9NRF2 756 aaPredicted RBP10.14□□□□□ -0.79
VTI1A-207ENST00000489357 PA2G4Q9UQ80 394 aaKnown RBP10.14□□□□□ -0.79
VTI1A-207ENST00000489357 ZNF652Q9Y2D9 606 aa10.14□□□□□ -0.79
VTI1A-207ENST00000489357 ZNF330Q9Y3S2 320 aaPredicted RBP10.14□□□□□ -0.79
VTI1A-207ENST00000489357 FPGT-TNNI3KV9GXZ4 949 aa10.14□□□□□ -0.79
VTI1A-207ENST00000489357 CARMIL3Q8ND23 1372 aa10.14□□□□□ -0.79
VTI1A-207ENST00000489357 MED23Q9ULK4 1368 aa10.14□□□□□ -0.79
VTI1A-207ENST00000489357 CCDC171Q6TFL3 1326 aa10.13□□□□□ -0.79
VTI1A-207ENST00000489357 UBN2Q6ZU65 1347 aa10.13□□□□□ -0.79
VTI1A-207ENST00000489357 CDHR2Q9BYE9 1310 aa10.13□□□□□ -0.79
VTI1A-207ENST00000489357 FSD2A1L4K1 749 aa10.13□□□□□ -0.79
VTI1A-207ENST00000489357 PSMA5P28066 241 aa10.13□□□□□ -0.79
VTI1A-207ENST00000489357 MAP2K5Q13163 448 aa10.13□□□□□ -0.79
VTI1A-207ENST00000489357 KRT32Q14532 448 aa10.13□□□□□ -0.79
VTI1A-207ENST00000489357 KLHL40Q2TBA0 621 aa10.13□□□□□ -0.79
VTI1A-207ENST00000489357 LRRFIP1Q32MZ4 808 aaKnown RBP10.13□□□□□ -0.79
VTI1A-207ENST00000489357 VPS53Q5VIR6 699 aa10.13□□□□□ -0.79
VTI1A-207ENST00000489357 PRR5LQ6MZQ0 368 aa10.13□□□□□ -0.79
VTI1A-207ENST00000489357 MAP4K1Q92918 833 aa10.13□□□□□ -0.79
VTI1A-207ENST00000489357 SLC4A5Q9BY07 1137 aa10.13□□□□□ -0.79
VTI1A-207ENST00000489357 BCL11AQ9H165 835 aa10.13□□□□□ -0.79
VTI1A-207ENST00000489357 ZBTB3Q9H5J0 574 aa10.13□□□□□ -0.79
VTI1A-207ENST00000489357 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.13□□□□□ -0.79
VTI1A-207ENST00000489357 ARFGEF1Q9Y6D6 1849 aa10.12□□□□□ -0.79
VTI1A-207ENST00000489357 BAG4O95429 457 aaKnown RBP10.12□□□□□ -0.79
VTI1A-207ENST00000489357 PCCAP05165 728 aaPredicted RBP10.12□□□□□ -0.79
VTI1A-207ENST00000489357 LSM11P83369 360 aaKnown RBP eCLIP10.12□□□□□ -0.79
VTI1A-207ENST00000489357 NECTIN1Q15223 517 aa10.12□□□□□ -0.79
VTI1A-207ENST00000489357 ANKRD1Q15327 319 aa10.12□□□□□ -0.79
VTI1A-207ENST00000489357 PROX2Q3B8N5 592 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms