RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 JDP2Q8WYK2 163 aa13.39□□□□□ -0.27
HDLBP-242ENST00000488013 SUGT1Q9Y2Z0 365 aa13.39□□□□□ -0.27
HDLBP-242ENST00000488013 RFX7Q2KHR2 1363 aa13.38□□□□□ -0.27
HDLBP-242ENST00000488013 SDSP20132 328 aa13.38□□□□□ -0.27
HDLBP-242ENST00000488013 MAP3K12Q12852 859 aa13.38□□□□□ -0.27
HDLBP-242ENST00000488013 TSHZ3Q63HK5 1081 aa13.38□□□□□ -0.27
HDLBP-242ENST00000488013 OLFM4Q6UX06 510 aa13.38□□□□□ -0.27
HDLBP-242ENST00000488013 LARGE2Q8N3Y3 721 aa13.38□□□□□ -0.27
HDLBP-242ENST00000488013 KBTBD3Q8NAB2 608 aa13.38□□□□□ -0.27
HDLBP-242ENST00000488013 DNAJC2Q99543 621 aaKnown RBP13.38□□□□□ -0.27
HDLBP-242ENST00000488013 HMG20BQ9P0W2 317 aa13.38□□□□□ -0.27
HDLBP-242ENST00000488013 SNED1Q8TER0 1413 aa13.38□□□□□ -0.27
HDLBP-242ENST00000488013 SALL1Q9NSC2 1324 aa13.38□□□□□ -0.27
HDLBP-242ENST00000488013 RIMBP2O15034 1052 aa13.37□□□□□ -0.27
HDLBP-242ENST00000488013 CDC45O75419 566 aa13.37□□□□□ -0.27
HDLBP-242ENST00000488013 GSPT1P15170 499 aaKnown RBP13.37□□□□□ -0.27
HDLBP-242ENST00000488013 IARSP41252 1262 aaKnown RBP13.37□□□□□ -0.27
HDLBP-242ENST00000488013 MCAMP43121 646 aa13.37□□□□□ -0.27
HDLBP-242ENST00000488013 MMP14P50281 582 aa13.37□□□□□ -0.27
HDLBP-242ENST00000488013 FKBP1AP62942 108 aaKnown RBP13.37□□□□□ -0.27
HDLBP-242ENST00000488013 TXNRD3Q86VQ6 643 aa13.37□□□□□ -0.27
HDLBP-242ENST00000488013 NIM1KQ8IY84 436 aa13.37□□□□□ -0.27
HDLBP-242ENST00000488013 RUFY2Q8WXA3 655 aa13.37□□□□□ -0.27
HDLBP-242ENST00000488013 RILPL2Q969X0 211 aa13.37□□□□□ -0.27
HDLBP-242ENST00000488013 SSUH2Q9Y2M2 353 aa13.37□□□□□ -0.27
HDLBP-242ENST00000488013 FAM205AQ6ZU69 1335 aa13.37□□□□□ -0.27
HDLBP-242ENST00000488013 GOLIM4O00461 696 aa13.36□□□□□ -0.27
HDLBP-242ENST00000488013 KLRK1P26718 216 aa13.36□□□□□ -0.27
HDLBP-242ENST00000488013 STRIP1Q5VSL9 837 aa13.36□□□□□ -0.27
HDLBP-242ENST00000488013 SLF2Q8IX21 1173 aa13.36□□□□□ -0.27
HDLBP-242ENST00000488013 FSD1Q9BTV5 496 aa13.36□□□□□ -0.27
HDLBP-242ENST00000488013 ZNRF3Q9ULT6 936 aa13.36□□□□□ -0.27
HDLBP-242ENST00000488013 COL11A2P13942 1736 aaPredicted RBP13.36□□□□□ -0.27
HDLBP-242ENST00000488013 COL4A1P02462 1669 aa13.35□□□□□ -0.27
HDLBP-242ENST00000488013 WTIPA6NIX2 430 aaPredicted RBP13.35□□□□□ -0.27
HDLBP-242ENST00000488013 LMNB1P20700 586 aa13.35□□□□□ -0.27
HDLBP-242ENST00000488013 ZAP70P43403 619 aa13.35□□□□□ -0.27
HDLBP-242ENST00000488013 AOC3Q16853 763 aa13.35□□□□□ -0.27
HDLBP-242ENST00000488013 ARHGAP27Q6ZUM4 889 aa13.35□□□□□ -0.27
HDLBP-242ENST00000488013 SKAP1Q86WV1 359 aa13.35□□□□□ -0.27
HDLBP-242ENST00000488013 ZNF277Q9NRM2 450 aaPredicted RBP13.35□□□□□ -0.27
HDLBP-242ENST00000488013 DIAPH3Q9NSV4 1193 aa13.35□□□□□ -0.27
HDLBP-242ENST00000488013 LRP2BPQ9P2M1 347 aa13.35□□□□□ -0.27
HDLBP-242ENST00000488013 LRRC37AA6NMS7 1700 aa13.35□□□□□ -0.27
HDLBP-242ENST00000488013 MYO3BQ8WXR4 1341 aa13.35□□□□□ -0.27
HDLBP-242ENST00000488013 USP17L3A6NCW0 530 aa13.34□□□□□ -0.27
HDLBP-242ENST00000488013 USP17L4A6NCW7 530 aa13.34□□□□□ -0.27
HDLBP-242ENST00000488013 NFKBIEO00221 500 aa13.34□□□□□ -0.27
HDLBP-242ENST00000488013 ECE2O60344 883 aa13.34□□□□□ -0.27
HDLBP-242ENST00000488013 CYP2E1P05181 493 aaPredicted RBP13.34□□□□□ -0.27
HDLBP-242ENST00000488013 GSTO1P78417 241 aa13.34□□□□□ -0.27
HDLBP-242ENST00000488013 SCARF1Q14162 830 aa13.34□□□□□ -0.27
HDLBP-242ENST00000488013 UBE3CQ15386 1083 aa13.34□□□□□ -0.27
HDLBP-242ENST00000488013 GPR162Q16538 588 aa13.34□□□□□ -0.27
HDLBP-242ENST00000488013 TTLL5Q6EMB2 1281 aa13.34□□□□□ -0.27
HDLBP-242ENST00000488013 ERICH6Q7L0X2 663 aa13.34□□□□□ -0.27
HDLBP-242ENST00000488013 USP17L1Q7RTZ2 530 aa13.34□□□□□ -0.27
HDLBP-242ENST00000488013 CERS3Q8IU89 383 aa13.34□□□□□ -0.27
HDLBP-242ENST00000488013 SNRKQ9NRH2 765 aa13.34□□□□□ -0.27
HDLBP-242ENST00000488013 MAST3O60307 1309 aa13.34□□□□□ -0.27
HDLBP-242ENST00000488013 IDH1O75874 414 aaKnown RBP13.33□□□□□ -0.28
HDLBP-242ENST00000488013 MFAP1P55081 439 aaKnown RBP13.33□□□□□ -0.28
HDLBP-242ENST00000488013 CHAF1AQ13111 956 aaPredicted RBP13.33□□□□□ -0.28
HDLBP-242ENST00000488013 TNIP1Q15025 636 aa13.33□□□□□ -0.28
HDLBP-242ENST00000488013 DOK7Q18PE1 504 aa13.33□□□□□ -0.28
HDLBP-242ENST00000488013 GPR101Q96P66 508 aaPredicted RBP13.33□□□□□ -0.28
HDLBP-242ENST00000488013 ABCF2Q9UG63 623 aa13.33□□□□□ -0.28
HDLBP-242ENST00000488013 RAD50Q92878 1312 aa13.33□□□□□ -0.28
HDLBP-242ENST00000488013 DLEC1Q9Y238 1755 aa13.32□□□□□ -0.28
HDLBP-242ENST00000488013 RNF113AO15541 343 aaKnown RBP13.32□□□□□ -0.28
HDLBP-242ENST00000488013 LDHBP07195 334 aaKnown RBP13.32□□□□□ -0.28
HDLBP-242ENST00000488013 LDHCP07864 332 aa13.32□□□□□ -0.28
HDLBP-242ENST00000488013 EIF6P56537 245 aaKnown RBP13.32□□□□□ -0.28
HDLBP-242ENST00000488013 GTF2IP78347 998 aa13.32□□□□□ -0.28
HDLBP-242ENST00000488013 MFSD14BQ5SR56 506 aa13.32□□□□□ -0.28
HDLBP-242ENST00000488013 SLC9C2Q5TAH2 1124 aa13.32□□□□□ -0.28
HDLBP-242ENST00000488013 MRIQ9BWK5 157 aa13.32□□□□□ -0.28
HDLBP-242ENST00000488013 DBNDD1Q9H9R9 158 aa13.32□□□□□ -0.28
HDLBP-242ENST00000488013 HELLSQ9NRZ9 838 aa13.32□□□□□ -0.28
HDLBP-242ENST00000488013 WWC3Q9ULE0 1092 aa13.32□□□□□ -0.28
HDLBP-242ENST00000488013 IQSEC3Q9UPP2 1182 aaPredicted RBP13.32□□□□□ -0.28
HDLBP-242ENST00000488013 SLX4Q8IY92 1834 aa13.32□□□□□ -0.28
HDLBP-242ENST00000488013 EPB41L2O43491 1005 aaKnown RBP13.31□□□□□ -0.28
HDLBP-242ENST00000488013 REC8O95072 547 aa13.31□□□□□ -0.28
HDLBP-242ENST00000488013 MAP4K4O95819 1239 aaPredicted RBP13.31□□□□□ -0.28
HDLBP-242ENST00000488013 CHMLP26374 656 aa13.31□□□□□ -0.28
HDLBP-242ENST00000488013 PI16Q6UXB8 463 aa13.31□□□□□ -0.28
HDLBP-242ENST00000488013 SLC51AQ86UW1 340 aa13.31□□□□□ -0.28
HDLBP-242ENST00000488013 DZIP1Q86YF9 867 aaKnown RBP13.31□□□□□ -0.28
HDLBP-242ENST00000488013 UPF2Q9HAU5 1272 aaKnown RBP13.31□□□□□ -0.28
HDLBP-242ENST00000488013 PIH1D3Q9NQM4 214 aaKnown RBP13.31□□□□□ -0.28
HDLBP-242ENST00000488013 RAI14Q9P0K7 980 aa13.31□□□□□ -0.28
HDLBP-242ENST00000488013 ZC3H4Q9UPT8 1303 aaKnown RBP13.31□□□□□ -0.28
HDLBP-242ENST00000488013 DUOX1Q9NRD9 1551 aa13.3□□□□□ -0.28
HDLBP-242ENST00000488013 RPS12P25398 132 aaKnown RBP13.3□□□□□ -0.28
HDLBP-242ENST00000488013 HDLBPQ00341 1268 aaKnown RBP13.3□□□□□ -0.28
HDLBP-242ENST00000488013 NAA16Q6N069 864 aaPredicted RBP13.3□□□□□ -0.28
HDLBP-242ENST00000488013 TBC1D9Q6ZT07 1266 aa13.3□□□□□ -0.28
HDLBP-242ENST00000488013 KIAA1211Q6ZU35 1233 aa13.3□□□□□ -0.28
HDLBP-242ENST00000488013 AGBL3Q8NEM8 1001 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms