RNA–Protein interactions for RNA: ENST00000487913.5

NR1H3-224, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 852 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-224ENST00000487913 OPTNQ96CV9 577 aa17.43■□□□□ 0.38
NR1H3-224ENST00000487913 ARHGAP39Q9C0H5 1083 aa17.43■□□□□ 0.38
NR1H3-224ENST00000487913 PHAXQ9H814 394 aaKnown RBP17.43■□□□□ 0.38
NR1H3-224ENST00000487913 ELP3Q9H9T3 547 aa17.43■□□□□ 0.38
NR1H3-224ENST00000487913 CWC25Q9NXE8 425 aaPredicted RBP17.43■□□□□ 0.38
NR1H3-224ENST00000487913 ZNF804BA4D1E1 1349 aa17.43■□□□□ 0.38
NR1H3-224ENST00000487913 CTSWP56202 376 aa17.42■□□□□ 0.38
NR1H3-224ENST00000487913 TAF1CQ15572 869 aaPredicted RBP17.42■□□□□ 0.38
NR1H3-224ENST00000487913 ANKRD13AQ8IZ07 590 aa17.42■□□□□ 0.38
NR1H3-224ENST00000487913 CERS5Q8N5B7 392 aa17.42■□□□□ 0.38
NR1H3-224ENST00000487913 CNKSR2Q8WXI2 1034 aa17.42■□□□□ 0.38
NR1H3-224ENST00000487913 GREM2Q9H772 168 aa17.42■□□□□ 0.38
NR1H3-224ENST00000487913 ZFYVE28Q9HCC9 887 aa17.42■□□□□ 0.38
NR1H3-224ENST00000487913 MTFR1Q15390 333 aa17.41■□□□□ 0.38
NR1H3-224ENST00000487913 NEUROD2Q15784 382 aa17.41■□□□□ 0.38
NR1H3-224ENST00000487913 DUSP27Q5VZP5 1158 aa17.41■□□□□ 0.38
NR1H3-224ENST00000487913 MTMR14Q8NCE2 650 aa17.41■□□□□ 0.38
NR1H3-224ENST00000487913 VEZTQ9HBM0 779 aa17.41■□□□□ 0.38
NR1H3-224ENST00000487913 SOX1O00570 391 aaPredicted RBP17.4■□□□□ 0.38
NR1H3-224ENST00000487913 FAM43AQ8N2R8 423 aa17.4■□□□□ 0.38
NR1H3-224ENST00000487913 TTLL11Q8NHH1 800 aa17.4■□□□□ 0.38
NR1H3-224ENST00000487913 PRMT6Q96LA8 375 aaPredicted RBP17.4■□□□□ 0.38
NR1H3-224ENST00000487913 LEMD3Q9Y2U8 911 aa17.4■□□□□ 0.38
NR1H3-224ENST00000487913 CCL15-CCL14A0A0B4J2E2 113 aa17.39■□□□□ 0.37
NR1H3-224ENST00000487913 SPDYE2BA6NHP3 402 aa17.39■□□□□ 0.37
NR1H3-224ENST00000487913 F8W031 263 aaPredicted RBP17.39■□□□□ 0.37
NR1H3-224ENST00000487913 SPDYE6P0CI01 402 aa17.39■□□□□ 0.37
NR1H3-224ENST00000487913 RASA3Q14644 834 aa17.39■□□□□ 0.37
NR1H3-224ENST00000487913 CCL15Q16663 113 aa17.39■□□□□ 0.37
NR1H3-224ENST00000487913 CFAP100Q494V2 611 aa17.39■□□□□ 0.37
NR1H3-224ENST00000487913 ZSWIM8A7E2V4 1837 aa17.39■□□□□ 0.37
NR1H3-224ENST00000487913 UBE2Q1Q7Z7E8 422 aa17.38■□□□□ 0.37
NR1H3-224ENST00000487913 LRCH3Q96II8 777 aa17.38■□□□□ 0.37
NR1H3-224ENST00000487913 TRIM35Q9UPQ4 493 aa17.38■□□□□ 0.37
NR1H3-224ENST00000487913 SPEF2Q9C093 1822 aa17.37■□□□□ 0.37
NR1H3-224ENST00000487913 MYO1BO43795 1136 aa17.37■□□□□ 0.37
NR1H3-224ENST00000487913 MNX1P50219 401 aaPredicted RBP17.37■□□□□ 0.37
NR1H3-224ENST00000487913 LACTBP83111 547 aaPredicted RBP17.37■□□□□ 0.37
NR1H3-224ENST00000487913 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.37■□□□□ 0.37
NR1H3-224ENST00000487913 CDAN1Q8IWY9 1227 aa17.37■□□□□ 0.37
NR1H3-224ENST00000487913 METTL22Q9BUU2 404 aaPredicted RBP17.37■□□□□ 0.37
NR1H3-224ENST00000487913 CD209Q9NNX6 404 aa17.37■□□□□ 0.37
NR1H3-224ENST00000487913 OTOFQ9HC10 1997 aa17.37■□□□□ 0.37
NR1H3-224ENST00000487913 ECM2O94769 699 aaPredicted RBP17.36■□□□□ 0.37
NR1H3-224ENST00000487913 GTF2A2P52657 109 aa17.36■□□□□ 0.37
NR1H3-224ENST00000487913 ZBTB7BO15156 539 aaPredicted RBP17.35■□□□□ 0.37
NR1H3-224ENST00000487913 VGLL4Q14135 290 aa17.35■□□□□ 0.37
NR1H3-224ENST00000487913 KIF22Q14807 665 aa17.35■□□□□ 0.37
NR1H3-224ENST00000487913 CCDC146Q8IYE0 955 aa17.35■□□□□ 0.37
NR1H3-224ENST00000487913 SNAP23O00161 211 aa17.34■□□□□ 0.37
NR1H3-224ENST00000487913 TLR2O60603 784 aa17.34■□□□□ 0.37
NR1H3-224ENST00000487913 IGHMBP2P38935 993 aaKnown RBP17.34■□□□□ 0.37
NR1H3-224ENST00000487913 HTATIP2Q9BUP3 242 aa17.34■□□□□ 0.37
NR1H3-224ENST00000487913 ANKRD2Q9GZV1 360 aa17.34■□□□□ 0.37
NR1H3-224ENST00000487913 JAG2Q9Y219 1238 aa17.34■□□□□ 0.37
NR1H3-224ENST00000487913 NR2E3Q9Y5X4 410 aa17.34■□□□□ 0.37
NR1H3-224ENST00000487913 IRS2Q9Y4H2 1338 aa17.33■□□□□ 0.36
NR1H3-224ENST00000487913 IGKV5-2P06315 115 aa17.33■□□□□ 0.36
NR1H3-224ENST00000487913 CTGFP29279 349 aa17.33■□□□□ 0.36
NR1H3-224ENST00000487913 KCNJ4P48050 445 aa17.33■□□□□ 0.36
NR1H3-224ENST00000487913 GJA8P48165 433 aa17.33■□□□□ 0.36
NR1H3-224ENST00000487913 MBIPQ9NS73 344 aa17.33■□□□□ 0.36
NR1H3-224ENST00000487913 ECM29Q5VYK3 1845 aa17.33■□□□□ 0.36
NR1H3-224ENST00000487913 UNC80Q8N2C7 3258 aa17.32■□□□□ 0.36
NR1H3-224ENST00000487913 A0A1W2PPC1 479 aa17.32■□□□□ 0.36
NR1H3-224ENST00000487913 GNRH1P01148 92 aa17.32■□□□□ 0.36
NR1H3-224ENST00000487913 RBM5P52756 815 aaKnown RBP eCLIP17.32■□□□□ 0.36
NR1H3-224ENST00000487913 PRMT2P55345 433 aa17.32■□□□□ 0.36
NR1H3-224ENST00000487913 NKX2-3Q8TAU0 364 aa17.32■□□□□ 0.36
NR1H3-224ENST00000487913 TEPSINQ96N21 525 aa17.32■□□□□ 0.36
NR1H3-224ENST00000487913 MAP3K2Q9Y2U5 619 aa17.32■□□□□ 0.36
NR1H3-224ENST00000487913 ELL2O00472 640 aaPredicted RBP17.31■□□□□ 0.36
NR1H3-224ENST00000487913 GJB1P08034 283 aa17.31■□□□□ 0.36
NR1H3-224ENST00000487913 CCL5P13501 91 aa17.31■□□□□ 0.36
NR1H3-224ENST00000487913 MAP3K9P80192 1104 aa17.31■□□□□ 0.36
NR1H3-224ENST00000487913 CHRNDQ07001 517 aa17.31■□□□□ 0.36
NR1H3-224ENST00000487913 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.31■□□□□ 0.36
NR1H3-224ENST00000487913 BTBD19C9JJ37 291 aa17.3■□□□□ 0.36
NR1H3-224ENST00000487913 WDHD1O75717 1129 aaPredicted RBP17.3■□□□□ 0.36
NR1H3-224ENST00000487913 ITGA6P23229 1130 aa17.3■□□□□ 0.36
NR1H3-224ENST00000487913 SPDYE2Q495Y8 402 aa17.3■□□□□ 0.36
NR1H3-224ENST00000487913 TRIM47Q96LD4 638 aa17.3■□□□□ 0.36
NR1H3-224ENST00000487913 MPHOSPH8Q99549 860 aa17.3■□□□□ 0.36
NR1H3-224ENST00000487913 ZNF70Q9UC06 446 aaPredicted RBP17.3■□□□□ 0.36
NR1H3-224ENST00000487913 SRRDQ9UH36 339 aa17.3■□□□□ 0.36
NR1H3-224ENST00000487913 RIPOR2Q9Y4F9 1068 aa17.3■□□□□ 0.36
NR1H3-224ENST00000487913 CSADQ9Y600 493 aa17.3■□□□□ 0.36
NR1H3-224ENST00000487913 SPDYE5A6NIY4 337 aa17.29■□□□□ 0.36
NR1H3-224ENST00000487913 TAF5LO75529 589 aa17.29■□□□□ 0.36
NR1H3-224ENST00000487913 FARP2O94887 1054 aaPredicted RBP17.29■□□□□ 0.36
NR1H3-224ENST00000487913 DDX58O95786 925 aaKnown RBP17.29■□□□□ 0.36
NR1H3-224ENST00000487913 IL1R1P14778 569 aa17.29■□□□□ 0.36
NR1H3-224ENST00000487913 GRK4P32298 578 aa17.29■□□□□ 0.36
NR1H3-224ENST00000487913 PSMC4P43686 418 aa17.29■□□□□ 0.36
NR1H3-224ENST00000487913 FKBP1AP62942 108 aaKnown RBP17.29■□□□□ 0.36
NR1H3-224ENST00000487913 TNFAIP1Q13829 316 aa17.29■□□□□ 0.36
NR1H3-224ENST00000487913 CWF19L2Q2TBE0 894 aaKnown RBP17.29■□□□□ 0.36
NR1H3-224ENST00000487913 TMEM39BQ9GZU3 492 aa17.29■□□□□ 0.36
NR1H3-224ENST00000487913 RNF208Q9H0X6 261 aa17.29■□□□□ 0.36
NR1H3-224ENST00000487913 TDRD3Q9H7E2 651 aaKnown RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms