RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 KDM2BQ8NHM5 1336 aa23.75■■□□□ 1.39
PCOLCE-208ENST00000487172 RPS12P25398 132 aaKnown RBP23.74■■□□□ 1.39
PCOLCE-208ENST00000487172 YY1P25490 414 aa23.74■■□□□ 1.39
PCOLCE-208ENST00000487172 TTC39AQ5SRH9 613 aa23.74■■□□□ 1.39
PCOLCE-208ENST00000487172 AGBL3Q8NEM8 1001 aa23.74■■□□□ 1.39
PCOLCE-208ENST00000487172 L3MBTL3Q96JM7 780 aaPredicted RBP23.74■■□□□ 1.39
PCOLCE-208ENST00000487172 GJA3Q9Y6H8 435 aa23.74■■□□□ 1.39
PCOLCE-208ENST00000487172 PDS5AQ29RF7 1337 aaKnown RBP23.74■■□□□ 1.39
PCOLCE-208ENST00000487172 MYO3BQ8WXR4 1341 aa23.74■■□□□ 1.39
PCOLCE-208ENST00000487172 MYH13Q9UKX3 1938 aa23.73■■□□□ 1.39
PCOLCE-208ENST00000487172 NUCB1Q02818 461 aa23.73■■□□□ 1.39
PCOLCE-208ENST00000487172 TBC1D22AQ8WUA7 517 aa23.73■■□□□ 1.39
PCOLCE-208ENST00000487172 DPF2Q92785 391 aa23.73■■□□□ 1.39
PCOLCE-208ENST00000487172 WDR90Q96KV7 1748 aa23.73■■□□□ 1.39
PCOLCE-208ENST00000487172 RASGRF1Q13972 1273 aa23.72■■□□□ 1.39
PCOLCE-208ENST00000487172 B4GALNT3Q6L9W6 998 aa23.72■■□□□ 1.39
PCOLCE-208ENST00000487172 WDR66Q8TBY9 1149 aa23.72■■□□□ 1.39
PCOLCE-208ENST00000487172 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.72■■□□□ 1.39
PCOLCE-208ENST00000487172 GMLQ99445 158 aa23.72■■□□□ 1.39
PCOLCE-208ENST00000487172 CHD1LQ86WJ1 897 aa23.71■■□□□ 1.39
PCOLCE-208ENST00000487172 FBXW7Q969H0 707 aa23.71■■□□□ 1.39
PCOLCE-208ENST00000487172 HMG20BQ9P0W2 317 aa23.71■■□□□ 1.39
PCOLCE-208ENST00000487172 ZBTB12Q9Y330 459 aaPredicted RBP23.71■■□□□ 1.39
PCOLCE-208ENST00000487172 COL1A1P02452 1464 aaPredicted RBP23.7■■□□□ 1.38
PCOLCE-208ENST00000487172 SALL1Q9NSC2 1324 aa23.7■■□□□ 1.38
PCOLCE-208ENST00000487172 MCAMP43121 646 aa23.7■■□□□ 1.38
PCOLCE-208ENST00000487172 MMP14P50281 582 aa23.7■■□□□ 1.38
PCOLCE-208ENST00000487172 CCDC136Q96JN2 1154 aa23.7■■□□□ 1.38
PCOLCE-208ENST00000487172 BCL11AQ9H165 835 aa23.7■■□□□ 1.38
PCOLCE-208ENST00000487172 PPP4R2Q9NY27 417 aa23.7■■□□□ 1.38
PCOLCE-208ENST00000487172 AKAP11Q9UKA4 1901 aa23.69■■□□□ 1.38
PCOLCE-208ENST00000487172 SALL3Q9BXA9 1300 aa23.69■■□□□ 1.38
PCOLCE-208ENST00000487172 ATP5JP18859 108 aa23.69■■□□□ 1.38
PCOLCE-208ENST00000487172 GMPSP49915 693 aaPredicted RBP23.69■■□□□ 1.38
PCOLCE-208ENST00000487172 SCNN1DP51172 638 aa23.69■■□□□ 1.38
PCOLCE-208ENST00000487172 CHAF1AQ13111 956 aaPredicted RBP23.69■■□□□ 1.38
PCOLCE-208ENST00000487172 SCARF1Q14162 830 aa23.69■■□□□ 1.38
PCOLCE-208ENST00000487172 MFSD14BQ5SR56 506 aa23.69■■□□□ 1.38
PCOLCE-208ENST00000487172 CENPQQ7L2Z9 268 aaPredicted RBP23.69■■□□□ 1.38
PCOLCE-208ENST00000487172 C16orf71Q8IYS4 520 aaPredicted RBP23.69■■□□□ 1.38
PCOLCE-208ENST00000487172 SPATA5Q8NB90 893 aa23.69■■□□□ 1.38
PCOLCE-208ENST00000487172 SUGT1Q9Y2Z0 365 aa23.69■■□□□ 1.38
PCOLCE-208ENST00000487172 SCN4AP35499 1836 aa23.68■■□□□ 1.38
PCOLCE-208ENST00000487172 POTECB2RU33 542 aa23.68■■□□□ 1.38
PCOLCE-208ENST00000487172 CERS5Q8N5B7 392 aa23.68■■□□□ 1.38
PCOLCE-208ENST00000487172 MXD3Q9BW11 206 aa23.68■■□□□ 1.38
PCOLCE-208ENST00000487172 LNPKQ9C0E8 428 aa23.68■■□□□ 1.38
PCOLCE-208ENST00000487172 ECHDC1Q9NTX5 307 aa23.68■■□□□ 1.38
PCOLCE-208ENST00000487172 GPRC5DQ9NZD1 345 aa23.68■■□□□ 1.38
PCOLCE-208ENST00000487172 JAG2Q9Y219 1238 aa23.68■■□□□ 1.38
PCOLCE-208ENST00000487172 TTC41PQ6P2S7 1318 aa23.67■■□□□ 1.38
PCOLCE-208ENST00000487172 IQCA1LA6NCM1 817 aa23.67■■□□□ 1.38
PCOLCE-208ENST00000487172 ZGPATQ8N5A5 531 aaKnown RBP23.67■■□□□ 1.38
PCOLCE-208ENST00000487172 GPATCH3Q96I76 525 aa23.67■■□□□ 1.38
PCOLCE-208ENST00000487172 CNOT7Q9UIV1 285 aaKnown RBP23.67■■□□□ 1.38
PCOLCE-208ENST00000487172 LMOD1P29536 600 aaPredicted RBP23.66■■□□□ 1.38
PCOLCE-208ENST00000487172 USP17L8P0C7I0 530 aa23.65■■□□□ 1.38
PCOLCE-208ENST00000487172 VEGFAP15692 232 aaPredicted RBP23.65■■□□□ 1.38
PCOLCE-208ENST00000487172 OTUD7AQ8TE49 926 aaPredicted RBP23.65■■□□□ 1.38
PCOLCE-208ENST00000487172 RRAGCQ9HB90 399 aa23.65■■□□□ 1.38
PCOLCE-208ENST00000487172 STAP2Q9UGK3 403 aa23.65■■□□□ 1.38
PCOLCE-208ENST00000487172 HACL1Q9UJ83 578 aa23.65■■□□□ 1.38
PCOLCE-208ENST00000487172 H7C1D1 291 aa23.64■■□□□ 1.37
PCOLCE-208ENST00000487172 IGSF3O75054 1194 aa23.64■■□□□ 1.37
PCOLCE-208ENST00000487172 MX1P20591 662 aa23.64■■□□□ 1.37
PCOLCE-208ENST00000487172 ZNF280AP59817 542 aaPredicted RBP23.64■■□□□ 1.37
PCOLCE-208ENST00000487172 PI16Q6UXB8 463 aa23.64■■□□□ 1.37
PCOLCE-208ENST00000487172 GPBP1L1Q9HC44 474 aaPredicted RBP23.64■■□□□ 1.37
PCOLCE-208ENST00000487172 CYP2E1P05181 493 aaPredicted RBP23.63■■□□□ 1.37
PCOLCE-208ENST00000487172 EPS15P42566 896 aa23.63■■□□□ 1.37
PCOLCE-208ENST00000487172 ZAP70P43403 619 aa23.63■■□□□ 1.37
PCOLCE-208ENST00000487172 SPTY2D1Q68D10 685 aaPredicted RBP23.63■■□□□ 1.37
PCOLCE-208ENST00000487172 KIAA0825Q8IV33 1275 aa23.63■■□□□ 1.37
PCOLCE-208ENST00000487172 MICALL2Q8IY33 904 aa23.63■■□□□ 1.37
PCOLCE-208ENST00000487172 OGFOD1Q8N543 542 aa23.63■■□□□ 1.37
PCOLCE-208ENST00000487172 ZNF526Q8TF50 670 aaPredicted RBP23.63■■□□□ 1.37
PCOLCE-208ENST00000487172 MRIQ9BWK5 157 aa23.63■■□□□ 1.37
PCOLCE-208ENST00000487172 SNRKQ9NRH2 765 aa23.63■■□□□ 1.37
PCOLCE-208ENST00000487172 HDAC9Q9UKV0 1011 aa23.63■■□□□ 1.37
PCOLCE-208ENST00000487172 ERC2O15083 957 aa23.62■■□□□ 1.37
PCOLCE-208ENST00000487172 PDE1AP54750 535 aa23.62■■□□□ 1.37
PCOLCE-208ENST00000487172 GRIK5Q16478 980 aa23.62■■□□□ 1.37
PCOLCE-208ENST00000487172 ZNF784Q8NCA9 323 aaPredicted RBP23.62■■□□□ 1.37
PCOLCE-208ENST00000487172 HAUS7Q99871 368 aa23.62■■□□□ 1.37
PCOLCE-208ENST00000487172 BOLA2Q9H3K6 86 aa23.62■■□□□ 1.37
PCOLCE-208ENST00000487172 NMRK2Q9NPI5 230 aa23.62■■□□□ 1.37
PCOLCE-208ENST00000487172 ADARB2Q9NS39 739 aaKnown RBP23.62■■□□□ 1.37
PCOLCE-208ENST00000487172 GLRX3O76003 335 aaKnown RBP23.61■■□□□ 1.37
PCOLCE-208ENST00000487172 EPHX2P34913 555 aa23.61■■□□□ 1.37
PCOLCE-208ENST00000487172 HDLBPQ00341 1268 aaKnown RBP23.61■■□□□ 1.37
PCOLCE-208ENST00000487172 PI4K2BQ8TCG2 481 aa23.61■■□□□ 1.37
PCOLCE-208ENST00000487172 OSBPL3Q9H4L5 887 aa23.61■■□□□ 1.37
PCOLCE-208ENST00000487172 TAF1DQ9H5J8 278 aaPredicted RBP23.61■■□□□ 1.37
PCOLCE-208ENST00000487172 ABCF2Q9UG63 623 aa23.61■■□□□ 1.37
PCOLCE-208ENST00000487172 TTF2Q9UNY4 1162 aaKnown RBP23.61■■□□□ 1.37
PCOLCE-208ENST00000487172 MAST3O60307 1309 aa23.6■■□□□ 1.37
PCOLCE-208ENST00000487172 LDHBP07195 334 aaKnown RBP23.6■■□□□ 1.37
PCOLCE-208ENST00000487172 PRDX5P30044 214 aa23.6■■□□□ 1.37
PCOLCE-208ENST00000487172 ERICH6Q7L0X2 663 aa23.6■■□□□ 1.37
PCOLCE-208ENST00000487172 PLEKHM2Q8IWE5 1019 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms