RNA–Protein interactions for RNA: ENST00000486585.1

PCMT1-208, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase, human

TSL 3

Gene PCMT1, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCMT1-208	ENST00000486585	FKBP1A	P62942	108 aa	Known RBP	12.54	□□□□□ -0.4
PCMT1-208	ENST00000486585	CHRND	Q07001	517 aa		12.54	□□□□□ -0.4
PCMT1-208	ENST00000486585	IFIT5	Q13325	482 aa	Known RBP	12.54	□□□□□ -0.4
PCMT1-208	ENST00000486585	IFNL1	Q8IU54	200 aa		12.54	□□□□□ -0.4
PCMT1-208	ENST00000486585	DNAAF4	Q8WXU2	420 aa		12.54	□□□□□ -0.4
PCMT1-208	ENST00000486585	IL16	Q14005	1332 aa		12.54	□□□□□ -0.4
PCMT1-208	ENST00000486585	KIAA0100	Q14667	2235 aa	Known RBP	12.53	□□□□□ -0.4
PCMT1-208	ENST00000486585	IREB2	P48200	963 aa	Known RBP	12.53	□□□□□ -0.4
PCMT1-208	ENST00000486585	FLII	Q13045	1269 aa		12.53	□□□□□ -0.4
PCMT1-208	ENST00000486585	FKBP5	Q13451	457 aa	Predicted RBP	12.53	□□□□□ -0.4
PCMT1-208	ENST00000486585	TSR2	Q969E8	191 aa	Known RBP	12.53	□□□□□ -0.4
PCMT1-208	ENST00000486585	ERO1A	Q96HE7	468 aa		12.53	□□□□□ -0.4
PCMT1-208	ENST00000486585	IL1R1	P14778	569 aa		12.52	□□□□□ -0.41
PCMT1-208	ENST00000486585	TNFAIP1	Q13829	316 aa		12.52	□□□□□ -0.41
PCMT1-208	ENST00000486585	ARHGEF6	Q15052	776 aa		12.52	□□□□□ -0.41
PCMT1-208	ENST00000486585	NCBP3	Q53F19	620 aa	Known RBP	12.52	□□□□□ -0.41
PCMT1-208	ENST00000486585	PPP4R3CP	Q6ZMV5	832 aa		12.52	□□□□□ -0.41
PCMT1-208	ENST00000486585	WWC1	Q8IX03	1113 aa		12.52	□□□□□ -0.41
PCMT1-208	ENST00000486585	TRIM17	Q9Y577	477 aa		12.52	□□□□□ -0.41
PCMT1-208	ENST00000486585	SPDYE2B	A6NHP3	402 aa		12.51	□□□□□ -0.41
PCMT1-208	ENST00000486585	SPDYE6	P0CI01	402 aa		12.51	□□□□□ -0.41
PCMT1-208	ENST00000486585	KLRK1	P26718	216 aa		12.51	□□□□□ -0.41
PCMT1-208	ENST00000486585	CASP7	P55210	303 aa		12.51	□□□□□ -0.41
PCMT1-208	ENST00000486585	G2E3	Q7L622	706 aa		12.51	□□□□□ -0.41
PCMT1-208	ENST00000486585	ANKRD13A	Q8IZ07	590 aa		12.51	□□□□□ -0.41
PCMT1-208	ENST00000486585	WNK4	Q96J92	1243 aa		12.51	□□□□□ -0.41
PCMT1-208	ENST00000486585	RBM5	P52756	815 aa	Known RBP eCLIP	12.5	□□□□□ -0.41
PCMT1-208	ENST00000486585	CCDC57	Q2TAC2	916 aa		12.5	□□□□□ -0.41
PCMT1-208	ENST00000486585	CFAP100	Q494V2	611 aa		12.5	□□□□□ -0.41
PCMT1-208	ENST00000486585	TAF7L	Q5H9L4	462 aa		12.5	□□□□□ -0.41
PCMT1-208	ENST00000486585	OTOP1	Q7RTM1	612 aa		12.5	□□□□□ -0.41
PCMT1-208	ENST00000486585	CHMP3	Q9Y3E7	222 aa		12.5	□□□□□ -0.41
PCMT1-208	ENST00000486585		A0A1B0GUL6	1792 aa		12.5	□□□□□ -0.41
PCMT1-208	ENST00000486585	RBBP6	Q7Z6E9	1792 aa	Known RBP	12.5	□□□□□ -0.41
PCMT1-208	ENST00000486585	TAF5L	O75529	589 aa		12.49	□□□□□ -0.41
PCMT1-208	ENST00000486585	WDHD1	O75717	1129 aa	Predicted RBP	12.49	□□□□□ -0.41
PCMT1-208	ENST00000486585	LDHAL6A	Q6ZMR3	332 aa		12.49	□□□□□ -0.41
PCMT1-208	ENST00000486585	CERS5	Q8N5B7	392 aa		12.49	□□□□□ -0.41
PCMT1-208	ENST00000486585	CLMN	Q96JQ2	1002 aa		12.49	□□□□□ -0.41
PCMT1-208	ENST00000486585	R3HDML	Q9H3Y0	253 aa		12.49	□□□□□ -0.41
PCMT1-208	ENST00000486585	VEZT	Q9HBM0	779 aa		12.49	□□□□□ -0.41
PCMT1-208	ENST00000486585	IRS2	Q9Y4H2	1338 aa		12.48	□□□□□ -0.41
PCMT1-208	ENST00000486585	CLRN2	A0PK11	232 aa		12.48	□□□□□ -0.41
PCMT1-208	ENST00000486585		F8W031	263 aa	Predicted RBP	12.48	□□□□□ -0.41
PCMT1-208	ENST00000486585	FOXO4	P98177	505 aa		12.48	□□□□□ -0.41
PCMT1-208	ENST00000486585	RASA3	Q14644	834 aa		12.48	□□□□□ -0.41
PCMT1-208	ENST00000486585	HELB	Q8NG08	1087 aa	Predicted RBP	12.48	□□□□□ -0.41
PCMT1-208	ENST00000486585	PRMT6	Q96LA8	375 aa	Predicted RBP	12.48	□□□□□ -0.41
PCMT1-208	ENST00000486585	EFCC1	Q9HA90	598 aa		12.48	□□□□□ -0.41
PCMT1-208	ENST00000486585	CNNM1	Q9NRU3	951 aa		12.48	□□□□□ -0.41
PCMT1-208	ENST00000486585	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	12.48	□□□□□ -0.41
PCMT1-208	ENST00000486585	SERPINA10	Q9UK55	444 aa		12.48	□□□□□ -0.41
PCMT1-208	ENST00000486585	PTPN22	Q9Y2R2	807 aa		12.48	□□□□□ -0.41
PCMT1-208	ENST00000486585	FAM205A	Q6ZU69	1335 aa		12.47	□□□□□ -0.41
PCMT1-208	ENST00000486585	TESPA1	A2RU30	521 aa	Predicted RBP	12.47	□□□□□ -0.41
PCMT1-208	ENST00000486585	IGF2BP3	O00425	579 aa	Known RBP eCLIP	12.47	□□□□□ -0.41
PCMT1-208	ENST00000486585	USP2	O75604	605 aa	Predicted RBP	12.47	□□□□□ -0.41
PCMT1-208	ENST00000486585	TNNI2	P48788	182 aa		12.47	□□□□□ -0.41
PCMT1-208	ENST00000486585	SP3	Q02447	781 aa		12.47	□□□□□ -0.41
PCMT1-208	ENST00000486585	NBPF12	Q5TAG4	269 aa	Predicted RBP	12.47	□□□□□ -0.41
PCMT1-208	ENST00000486585	LMBR1L	Q6UX01	489 aa		12.47	□□□□□ -0.41
PCMT1-208	ENST00000486585	WDR63	Q8IWG1	891 aa		12.47	□□□□□ -0.41
PCMT1-208	ENST00000486585	GRM8	O00222	908 aa		12.46	□□□□□ -0.41
PCMT1-208	ENST00000486585	PLIN1	O60240	522 aa		12.46	□□□□□ -0.41
PCMT1-208	ENST00000486585	CRHR2	Q13324	411 aa		12.46	□□□□□ -0.41
PCMT1-208	ENST00000486585	UBE4A	Q14139	1066 aa		12.46	□□□□□ -0.41
PCMT1-208	ENST00000486585	MFSD14B	Q5SR56	506 aa		12.46	□□□□□ -0.41
PCMT1-208	ENST00000486585	NBPF11	Q86T75	865 aa		12.46	□□□□□ -0.41
PCMT1-208	ENST00000486585	C9orf78	Q9NZ63	289 aa	Predicted RBP	12.46	□□□□□ -0.41
PCMT1-208	ENST00000486585	FZD1	Q9UP38	647 aa		12.46	□□□□□ -0.41
PCMT1-208	ENST00000486585	SSC5D	A1L4H1	1573 aa		12.46	□□□□□ -0.42
PCMT1-208	ENST00000486585	FANCI	Q9NVI1	1328 aa		12.45	□□□□□ -0.42
PCMT1-208	ENST00000486585	SNAP23	O00161	211 aa		12.45	□□□□□ -0.42
PCMT1-208	ENST00000486585	VAMP4	O75379	141 aa		12.45	□□□□□ -0.42
PCMT1-208	ENST00000486585	HIBADH	P31937	336 aa	Known RBP	12.45	□□□□□ -0.42
PCMT1-208	ENST00000486585	GTF2A2	P52657	109 aa		12.45	□□□□□ -0.42
PCMT1-208	ENST00000486585	SPDYE2	Q495Y8	402 aa		12.45	□□□□□ -0.42
PCMT1-208	ENST00000486585	BEND3	Q5T5X7	828 aa		12.45	□□□□□ -0.42
PCMT1-208	ENST00000486585	TDRD7	Q8NHU6	1098 aa	Known RBP	12.45	□□□□□ -0.42
PCMT1-208	ENST00000486585	CD99L2	Q8TCZ2	262 aa		12.45	□□□□□ -0.42
PCMT1-208	ENST00000486585	ARMC5	Q96C12	935 aa		12.45	□□□□□ -0.42
PCMT1-208	ENST00000486585	OPTN	Q96CV9	577 aa		12.45	□□□□□ -0.42
PCMT1-208	ENST00000486585	HOOK2	Q96ED9	719 aa		12.45	□□□□□ -0.42
PCMT1-208	ENST00000486585	TMEM106C	Q9BVX2	250 aa		12.45	□□□□□ -0.42
PCMT1-208	ENST00000486585	ZNF70	Q9UC06	446 aa	Predicted RBP	12.45	□□□□□ -0.42
PCMT1-208	ENST00000486585	TTF2	Q9UNY4	1162 aa	Known RBP	12.45	□□□□□ -0.42
PCMT1-208	ENST00000486585	CSAD	Q9Y600	493 aa		12.45	□□□□□ -0.42
PCMT1-208	ENST00000486585	OTOF	Q9HC10	1997 aa		12.45	□□□□□ -0.42
PCMT1-208	ENST00000486585	ALDH1L1	O75891	902 aa		12.44	□□□□□ -0.42
PCMT1-208	ENST00000486585	VPS37D	Q86XT2	251 aa		12.44	□□□□□ -0.42
PCMT1-208	ENST00000486585	TBC1D22A	Q8WUA7	517 aa		12.44	□□□□□ -0.42
PCMT1-208	ENST00000486585	ZFYVE28	Q9HCC9	887 aa		12.44	□□□□□ -0.42
PCMT1-208	ENST00000486585	ARAP2	Q8WZ64	1704 aa		12.44	□□□□□ -0.42
PCMT1-208	ENST00000486585	POTEF	A5A3E0	1075 aa		12.43	□□□□□ -0.42
PCMT1-208	ENST00000486585	MAP3K9	P80192	1104 aa		12.43	□□□□□ -0.42
PCMT1-208	ENST00000486585	HDLBP	Q00341	1268 aa	Known RBP	12.43	□□□□□ -0.42
PCMT1-208	ENST00000486585	KIF22	Q14807	665 aa		12.43	□□□□□ -0.42
PCMT1-208	ENST00000486585	TAF1C	Q15572	869 aa	Predicted RBP	12.43	□□□□□ -0.42
PCMT1-208	ENST00000486585	DZIP1L	Q8IYY4	767 aa	Known RBP	12.43	□□□□□ -0.42
PCMT1-208	ENST00000486585	TDRD3	Q9H7E2	651 aa	Known RBP	12.43	□□□□□ -0.42

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