RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 TBC1D10BQ4KMP7 808 aaPredicted RBP15.42■□□□□ 0.06
HMG20B-211ENST00000486028 RBM26Q5T8P6 1007 aaKnown RBP15.42■□□□□ 0.06
HMG20B-211ENST00000486028 C20orf194Q5TEA3 1177 aa15.42■□□□□ 0.06
HMG20B-211ENST00000486028 MAP1SQ66K74 1059 aaPredicted RBP15.42■□□□□ 0.06
HMG20B-211ENST00000486028 SAMD7Q7Z3H4 446 aa15.42■□□□□ 0.06
HMG20B-211ENST00000486028 CNTROBQ8N137 903 aa15.42■□□□□ 0.06
HMG20B-211ENST00000486028 TRPM4Q8TD43 1214 aa15.42■□□□□ 0.06
HMG20B-211ENST00000486028 MXD3Q9BW11 206 aa15.42■□□□□ 0.06
HMG20B-211ENST00000486028 ZBTB40Q9NUA8 1239 aa15.42■□□□□ 0.06
HMG20B-211ENST00000486028 AKAP2Q9Y2D5 859 aa15.42■□□□□ 0.06
HMG20B-211ENST00000486028 BCAMP50895 628 aa15.41■□□□□ 0.06
HMG20B-211ENST00000486028 FKBP1AP62942 108 aaKnown RBP15.41■□□□□ 0.06
HMG20B-211ENST00000486028 CEP85Q6P2H3 762 aa15.41■□□□□ 0.06
HMG20B-211ENST00000486028 PGAP2Q9UHJ9 254 aa15.41■□□□□ 0.06
HMG20B-211ENST00000486028 GTF3C3Q9Y5Q9 886 aa15.41■□□□□ 0.06
HMG20B-211ENST00000486028 A0A1B0GUL6 1792 aa15.41■□□□□ 0.06
HMG20B-211ENST00000486028 FAM205AQ6ZU69 1335 aa15.41■□□□□ 0.06
HMG20B-211ENST00000486028 SURF6O75683 361 aaKnown RBP15.4■□□□□ 0.06
HMG20B-211ENST00000486028 ITGBL1O95965 494 aaPredicted RBP15.4■□□□□ 0.06
HMG20B-211ENST00000486028 TFCP2Q12800 502 aa15.4■□□□□ 0.06
HMG20B-211ENST00000486028 OS9Q13438 667 aaPredicted RBP15.4■□□□□ 0.06
HMG20B-211ENST00000486028 KIF4BQ2VIQ3 1234 aa15.4■□□□□ 0.06
HMG20B-211ENST00000486028 MYOZ2Q9NPC6 264 aa15.4■□□□□ 0.06
HMG20B-211ENST00000486028 HDAC9Q9UKV0 1011 aa15.4■□□□□ 0.06
HMG20B-211ENST00000486028 KIAA0825Q8IV33 1275 aa15.39■□□□□ 0.05
HMG20B-211ENST00000486028 RPAP2Q8IXW5 612 aaPredicted RBP15.39■□□□□ 0.05
HMG20B-211ENST00000486028 GNL3LQ9NVN8 582 aaKnown RBP15.39■□□□□ 0.05
HMG20B-211ENST00000486028 JAG2Q9Y219 1238 aa15.39■□□□□ 0.05
HMG20B-211ENST00000486028 NOP58Q9Y2X3 529 aaKnown RBP15.39■□□□□ 0.05
HMG20B-211ENST00000486028 EGFRP00533 1210 aa15.38■□□□□ 0.05
HMG20B-211ENST00000486028 RRP1P56182 461 aaKnown RBP15.38■□□□□ 0.05
HMG20B-211ENST00000486028 TIMM10P62072 90 aa15.38■□□□□ 0.05
HMG20B-211ENST00000486028 CHAF1AQ13111 956 aaPredicted RBP15.38■□□□□ 0.05
HMG20B-211ENST00000486028 CERS5Q8N5B7 392 aa15.38■□□□□ 0.05
HMG20B-211ENST00000486028 IQSEC3Q9UPP2 1182 aaPredicted RBP15.38■□□□□ 0.05
HMG20B-211ENST00000486028 PSME4Q14997 1843 aa15.38■□□□□ 0.05
HMG20B-211ENST00000486028 A0A1B0GUL7 405 aa15.37■□□□□ 0.05
HMG20B-211ENST00000486028 HMMRO75330 724 aa15.37■□□□□ 0.05
HMG20B-211ENST00000486028 VASPP50552 380 aaPredicted RBP15.37■□□□□ 0.05
HMG20B-211ENST00000486028 SCARF1Q14162 830 aa15.37■□□□□ 0.05
HMG20B-211ENST00000486028 MFSD14BQ5SR56 506 aa15.37■□□□□ 0.05
HMG20B-211ENST00000486028 CDC37L1Q7L3B6 337 aa15.37■□□□□ 0.05
HMG20B-211ENST00000486028 TBC1D22AQ8WUA7 517 aa15.37■□□□□ 0.05
HMG20B-211ENST00000486028 DCPSQ96C86 337 aaKnown RBP15.37■□□□□ 0.05
HMG20B-211ENST00000486028 NEUROD6Q96NK8 337 aa15.37■□□□□ 0.05
HMG20B-211ENST00000486028 PASKQ96RG2 1323 aa15.37■□□□□ 0.05
HMG20B-211ENST00000486028 ADAMTSL1Q8N6G6 1762 aa15.36■□□□□ 0.05
HMG20B-211ENST00000486028 ADORA1P30542 326 aa15.36■□□□□ 0.05
HMG20B-211ENST00000486028 HSP90AB4PQ58FF6 505 aa15.36■□□□□ 0.05
HMG20B-211ENST00000486028 F8W031 263 aaPredicted RBP15.35■□□□□ 0.05
HMG20B-211ENST00000486028 SEMA3EO15041 775 aa15.35■□□□□ 0.05
HMG20B-211ENST00000486028 DLGAP5Q15398 846 aa15.35■□□□□ 0.05
HMG20B-211ENST00000486028 GORABQ5T7V8 394 aa15.35■□□□□ 0.05
HMG20B-211ENST00000486028 CCDC102BQ68D86 513 aa15.35■□□□□ 0.05
HMG20B-211ENST00000486028 USP48Q86UV5 1035 aa15.35■□□□□ 0.05
HMG20B-211ENST00000486028 ERC1Q8IUD2 1116 aa15.35■□□□□ 0.05
HMG20B-211ENST00000486028 WDR66Q8TBY9 1149 aa15.35■□□□□ 0.05
HMG20B-211ENST00000486028 XAGE2Q96GT9 111 aa15.35■□□□□ 0.05
HMG20B-211ENST00000486028 GPR108Q9NPR9 543 aa15.35■□□□□ 0.05
HMG20B-211ENST00000486028 TMEM88BA6NKF7 163 aa15.34■□□□□ 0.05
HMG20B-211ENST00000486028 TRAF5O00463 557 aa15.34■□□□□ 0.05
HMG20B-211ENST00000486028 PHKA1P46020 1223 aa15.34■□□□□ 0.05
HMG20B-211ENST00000486028 KRT26Q7Z3Y9 468 aa15.34■□□□□ 0.05
HMG20B-211ENST00000486028 SULF1Q8IWU6 871 aa15.34■□□□□ 0.05
HMG20B-211ENST00000486028 GLIS2Q9BZE0 524 aaPredicted RBP15.34■□□□□ 0.05
HMG20B-211ENST00000486028 CREBZFQ9NS37 354 aa15.34■□□□□ 0.05
HMG20B-211ENST00000486028 GGA3Q9NZ52 723 aa15.34■□□□□ 0.05
HMG20B-211ENST00000486028 DENND2AQ9ULE3 1009 aa15.34■□□□□ 0.05
HMG20B-211ENST00000486028 TTF2Q9UNY4 1162 aaKnown RBP15.34■□□□□ 0.05
HMG20B-211ENST00000486028 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.34■□□□□ 0.05
HMG20B-211ENST00000486028 WNT10BO00744 389 aa15.33■□□□□ 0.04
HMG20B-211ENST00000486028 HTRA3P83110 453 aa15.33■□□□□ 0.04
HMG20B-211ENST00000486028 NBPF9Q3BBW0 867 aa15.33■□□□□ 0.04
HMG20B-211ENST00000486028 ANGEL2Q5VTE6 544 aaKnown RBP15.33■□□□□ 0.04
HMG20B-211ENST00000486028 SIRT2Q8IXJ6 389 aa15.33■□□□□ 0.04
HMG20B-211ENST00000486028 MTMR14Q8NCE2 650 aa15.33■□□□□ 0.04
HMG20B-211ENST00000486028 EXOC6BQ9Y2D4 811 aa15.33■□□□□ 0.04
HMG20B-211ENST00000486028 SUGT1Q9Y2Z0 365 aa15.33■□□□□ 0.04
HMG20B-211ENST00000486028 ASTN2O75129 1339 aaPredicted RBP15.33■□□□□ 0.04
HMG20B-211ENST00000486028 RBM5P52756 815 aaKnown RBP eCLIP15.32■□□□□ 0.04
HMG20B-211ENST00000486028 CFAP100Q494V2 611 aa15.32■□□□□ 0.04
HMG20B-211ENST00000486028 TNNI3KQ59H18 835 aa15.32■□□□□ 0.04
HMG20B-211ENST00000486028 SERPINA10Q9UK55 444 aa15.32■□□□□ 0.04
HMG20B-211ENST00000486028 FPGT-TNNI3KV9GXZ4 949 aa15.32■□□□□ 0.04
HMG20B-211ENST00000486028 PITPNM2Q9BZ72 1349 aa15.32■□□□□ 0.04
HMG20B-211ENST00000486028 CEP350Q5VT06 3117 aa15.32■□□□□ 0.04
HMG20B-211ENST00000486028 MYO1BO43795 1136 aa15.31■□□□□ 0.04
HMG20B-211ENST00000486028 HDLBPQ00341 1268 aaKnown RBP15.31■□□□□ 0.04
HMG20B-211ENST00000486028 FMR1Q06787 632 aaKnown RBP eCLIP15.31■□□□□ 0.04
HMG20B-211ENST00000486028 ZBED3Q96IU2 234 aaPredicted RBP15.31■□□□□ 0.04
HMG20B-211ENST00000486028 SPDYE2BA6NHP3 402 aa15.3■□□□□ 0.04
HMG20B-211ENST00000486028 ADM5C9JUS6 153 aa15.3■□□□□ 0.04
HMG20B-211ENST00000486028 ZNF646O15015 1829 aaPredicted RBP15.3■□□□□ 0.04
HMG20B-211ENST00000486028 MAST3O60307 1309 aa15.3■□□□□ 0.04
HMG20B-211ENST00000486028 RAB11FIP3O75154 756 aa15.3■□□□□ 0.04
HMG20B-211ENST00000486028 CELF2O95319 508 aaKnown RBP15.3■□□□□ 0.04
HMG20B-211ENST00000486028 UQCRFS1P1P0C7P4 283 aa15.3■□□□□ 0.04
HMG20B-211ENST00000486028 SPDYE6P0CI01 402 aa15.3■□□□□ 0.04
HMG20B-211ENST00000486028 RASGRF1Q13972 1273 aa15.3■□□□□ 0.04
HMG20B-211ENST00000486028 GRIK5Q16478 980 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms